RNA–Protein interactions for RNA: ENST00000639667.1

HNRNPU-220, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 2

Gene HNRNPU, Length 3,940 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-220ENST00000639667 TMC8Q8IU68 726 aa6.04□□□□□ -1.44
HNRNPU-220ENST00000639667 RHOT2Q8IXI1 618 aa6.04□□□□□ -1.44
HNRNPU-220ENST00000639667 CELF5Q8N6W0 485 aaKnown RBP6.04□□□□□ -1.44
HNRNPU-220ENST00000639667 NAT16Q8N8M0 369 aa6.04□□□□□ -1.44
HNRNPU-220ENST00000639667 BPIFB1Q8TDL5 484 aa6.04□□□□□ -1.44
HNRNPU-220ENST00000639667 RFFLQ8WZ73 363 aa6.04□□□□□ -1.44
HNRNPU-220ENST00000639667 ZNF592Q92610 1267 aa6.04□□□□□ -1.44
HNRNPU-220ENST00000639667 ALS2CR12Q96Q35 445 aa6.04□□□□□ -1.44
HNRNPU-220ENST00000639667 TRMT61BQ9BVS5 477 aaKnown RBP6.04□□□□□ -1.44
HNRNPU-220ENST00000639667 TTLL2Q9BWV7 592 aa6.04□□□□□ -1.44
HNRNPU-220ENST00000639667 TRIM7Q9C029 511 aa6.04□□□□□ -1.44
HNRNPU-220ENST00000639667 S1PR5Q9H228 398 aa6.04□□□□□ -1.44
HNRNPU-220ENST00000639667 OSGEPQ9NPF4 335 aa6.04□□□□□ -1.44
HNRNPU-220ENST00000639667 DUS2Q9NX74 493 aaKnown RBP6.04□□□□□ -1.44
HNRNPU-220ENST00000639667 IP6K2Q9UHH9 426 aa6.04□□□□□ -1.44
HNRNPU-220ENST00000639667 LAMP2P13473 410 aa6.04□□□□□ -1.44
HNRNPU-220ENST00000639667 MSNP26038 577 aaKnown RBP6.04□□□□□ -1.44
HNRNPU-220ENST00000639667 CCR1P32246 355 aa6.04□□□□□ -1.44
HNRNPU-220ENST00000639667 CDH5P33151 784 aaPredicted RBP6.04□□□□□ -1.44
HNRNPU-220ENST00000639667 CETN2P41208 172 aa6.04□□□□□ -1.44
HNRNPU-220ENST00000639667 MATKP42679 507 aa6.04□□□□□ -1.44
HNRNPU-220ENST00000639667 ATXN1P54253 815 aaKnown RBP6.04□□□□□ -1.44
HNRNPU-220ENST00000639667 LEXMQ3ZCV2 418 aa6.04□□□□□ -1.44
HNRNPU-220ENST00000639667 EFHC2Q5JST6 749 aa6.04□□□□□ -1.44
HNRNPU-220ENST00000639667 DNTTIP2Q5QJE6 756 aaKnown RBP6.04□□□□□ -1.44
HNRNPU-220ENST00000639667 PARM1Q6UWI2 310 aa6.04□□□□□ -1.44
HNRNPU-220ENST00000639667 OLFML1Q6UWY5 402 aa6.04□□□□□ -1.44
HNRNPU-220ENST00000639667 MTSS1LQ765P7 747 aa6.04□□□□□ -1.44
HNRNPU-220ENST00000639667 DDX42Q86XP3 938 aaKnown RBP eCLIP6.04□□□□□ -1.44
HNRNPU-220ENST00000639667 UNC45BQ8IWX7 931 aa6.04□□□□□ -1.44
HNRNPU-220ENST00000639667 OVCA2Q8WZ82 227 aa6.04□□□□□ -1.44
HNRNPU-220ENST00000639667 VCPIP1Q96JH7 1222 aa6.04□□□□□ -1.44
HNRNPU-220ENST00000639667 MSLNLQ96KJ4 702 aa6.04□□□□□ -1.44
HNRNPU-220ENST00000639667 DDX50Q9BQ39 737 aaKnown RBP6.04□□□□□ -1.44
HNRNPU-220ENST00000639667 CNPY3Q9BT09 278 aa6.04□□□□□ -1.44
HNRNPU-220ENST00000639667 GOLPH3Q9H4A6 298 aa6.04□□□□□ -1.44
HNRNPU-220ENST00000639667 KLHL11Q9NVR0 708 aa6.04□□□□□ -1.44
HNRNPU-220ENST00000639667 CLIC5Q9NZA1 410 aa6.04□□□□□ -1.44
HNRNPU-220ENST00000639667 TRIM10Q9UDY6 481 aa6.04□□□□□ -1.44
HNRNPU-220ENST00000639667 PPP2R2CQ9Y2T4 447 aa6.04□□□□□ -1.44
HNRNPU-220ENST00000639667 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.04□□□□□ -1.44
HNRNPU-220ENST00000639667 PLXNA4Q9HCM2 1894 aa6.03□□□□□ -1.44
HNRNPU-220ENST00000639667 CCP110O43303 1012 aa6.03□□□□□ -1.44
HNRNPU-220ENST00000639667 GABBR2O75899 941 aa6.03□□□□□ -1.44
HNRNPU-220ENST00000639667 NEBLO76041 1014 aa6.03□□□□□ -1.44
HNRNPU-220ENST00000639667 PRAMEF12O95522 483 aa6.03□□□□□ -1.44
HNRNPU-220ENST00000639667 F9P00740 461 aa6.03□□□□□ -1.44
HNRNPU-220ENST00000639667 GLI1P08151 1106 aa6.03□□□□□ -1.44
HNRNPU-220ENST00000639667 SMTNL2Q2TAL5 461 aa6.03□□□□□ -1.44
HNRNPU-220ENST00000639667 RAB41Q5JT25 222 aa6.03□□□□□ -1.44
HNRNPU-220ENST00000639667 DAB2IPQ5VWQ8 1189 aa6.03□□□□□ -1.44
HNRNPU-220ENST00000639667 RAP1GAP2Q684P5 730 aa6.03□□□□□ -1.44
HNRNPU-220ENST00000639667 TRIM68Q6AZZ1 485 aa6.03□□□□□ -1.44
HNRNPU-220ENST00000639667 LGI2Q8N0V4 545 aa6.03□□□□□ -1.44
HNRNPU-220ENST00000639667 KIAA1524Q8TCG1 905 aa6.03□□□□□ -1.44
HNRNPU-220ENST00000639667 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.03□□□□□ -1.44
HNRNPU-220ENST00000639667 MYRFLQ96LU7 910 aa6.03□□□□□ -1.44
HNRNPU-220ENST00000639667 CEP295NLQ96MC4 621 aa6.03□□□□□ -1.44
HNRNPU-220ENST00000639667 RPRD1AQ96P16 312 aaPredicted RBP6.03□□□□□ -1.44
HNRNPU-220ENST00000639667 MAK16Q9BXY0 300 aaKnown RBP6.03□□□□□ -1.44
HNRNPU-220ENST00000639667 TSGA10Q9BZW7 698 aa6.03□□□□□ -1.44
HNRNPU-220ENST00000639667 DCLK3Q9C098 648 aa6.03□□□□□ -1.44
HNRNPU-220ENST00000639667 TKTL2Q9H0I9 626 aa6.03□□□□□ -1.44
HNRNPU-220ENST00000639667 ISCUQ9H1K1 167 aa6.03□□□□□ -1.44
HNRNPU-220ENST00000639667 GDE1Q9NZC3 331 aa6.03□□□□□ -1.44
HNRNPU-220ENST00000639667 CCL26Q9Y258 94 aa6.03□□□□□ -1.44
HNRNPU-220ENST00000639667 USP3Q9Y6I4 520 aa6.03□□□□□ -1.44
HNRNPU-220ENST00000639667 NUMBLQ9Y6R0 609 aa6.03□□□□□ -1.44
HNRNPU-220ENST00000639667 NLRC5Q86WI3 1866 aa6.03□□□□□ -1.44
HNRNPU-220ENST00000639667 SLC9A3R1O14745 358 aaPredicted RBP6.03□□□□□ -1.44
HNRNPU-220ENST00000639667 KIF5CO60282 957 aa6.03□□□□□ -1.44
HNRNPU-220ENST00000639667 FTCDO95954 541 aa6.03□□□□□ -1.44
HNRNPU-220ENST00000639667 SLC2A3P11169 496 aa6.03□□□□□ -1.44
HNRNPU-220ENST00000639667 RDXP35241 583 aaKnown RBP6.03□□□□□ -1.44
HNRNPU-220ENST00000639667 SH3PXD2AQ5TCZ1 1133 aa6.03□□□□□ -1.44
HNRNPU-220ENST00000639667 PM20D1Q6GTS8 502 aa6.03□□□□□ -1.44
HNRNPU-220ENST00000639667 RFWD3Q6PCD5 774 aa6.03□□□□□ -1.44
HNRNPU-220ENST00000639667 PEX26Q7Z412 305 aa6.03□□□□□ -1.44
HNRNPU-220ENST00000639667 C17orf53Q8N3J3 647 aaPredicted RBP6.03□□□□□ -1.44
HNRNPU-220ENST00000639667 CARNMT1Q8N4J0 409 aa6.03□□□□□ -1.44
HNRNPU-220ENST00000639667 USP13Q92995 863 aaPredicted RBP6.03□□□□□ -1.44
HNRNPU-220ENST00000639667 TMA16Q96EY4 203 aaKnown RBP6.03□□□□□ -1.44
HNRNPU-220ENST00000639667 NECAB3Q96P71 396 aaPredicted RBP6.03□□□□□ -1.44
HNRNPU-220ENST00000639667 CALN1Q9BXU9 219 aa6.03□□□□□ -1.44
HNRNPU-220ENST00000639667 EBF3Q9H4W6 596 aa6.03□□□□□ -1.44
HNRNPU-220ENST00000639667 UVRAGQ9P2Y5 699 aa6.03□□□□□ -1.44
HNRNPU-220ENST00000639667 SNX10Q9Y5X0 201 aa6.03□□□□□ -1.44
HNRNPU-220ENST00000639667 ADGRG1Q9Y653 693 aa6.03□□□□□ -1.44
HNRNPU-220ENST00000639667 DUSP10Q9Y6W6 482 aa6.03□□□□□ -1.44
HNRNPU-220ENST00000639667 RANBP2P49792 3224 aaKnown RBP6.03□□□□□ -1.44
HNRNPU-220ENST00000639667 VWA8A3KMH1 1905 aa6.03□□□□□ -1.44
HNRNPU-220ENST00000639667 LRRD1A4D1F6 860 aa6.03□□□□□ -1.44
HNRNPU-220ENST00000639667 F5H5T6 163 aa6.03□□□□□ -1.44
HNRNPU-220ENST00000639667 TADA3O75528 432 aa6.03□□□□□ -1.44
HNRNPU-220ENST00000639667 C1RP00736 705 aa6.03□□□□□ -1.44
HNRNPU-220ENST00000639667 KRT1P04264 644 aa6.03□□□□□ -1.44
HNRNPU-220ENST00000639667 TFE3P19532 575 aaPredicted RBP6.03□□□□□ -1.44
HNRNPU-220ENST00000639667 TRIP4Q15650 581 aaPredicted RBP6.03□□□□□ -1.44
HNRNPU-220ENST00000639667 KCNT1Q5JUK3 1230 aa6.03□□□□□ -1.44
HNRNPU-220ENST00000639667 ZNF569Q5MCW4 686 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms