RNA–Protein interactions for RNA: ENST00000638567.1

SCARB2-210, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 4,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-210ENST00000638567 SNTG2Q9NY99 539 aa17.13■□□□□ 0.33
SCARB2-210ENST00000638567 ITGA11Q9UKX5 1188 aa17.13■□□□□ 0.33
SCARB2-210ENST00000638567 IGLV3-22A0A075B6J6 115 aa17.13■□□□□ 0.33
SCARB2-210ENST00000638567 TRIM13O60858 407 aa17.13■□□□□ 0.33
SCARB2-210ENST00000638567 UBA1P22314 1058 aaKnown RBP17.13■□□□□ 0.33
SCARB2-210ENST00000638567 CRADDP78560 199 aa17.13■□□□□ 0.33
SCARB2-210ENST00000638567 LACTB2Q53H82 288 aaPredicted RBP17.13■□□□□ 0.33
SCARB2-210ENST00000638567 IRGCQ6NXR0 463 aa17.13■□□□□ 0.33
SCARB2-210ENST00000638567 FITM2Q8N6M3 262 aa17.13■□□□□ 0.33
SCARB2-210ENST00000638567 LRRC15Q8TF66 581 aa17.13■□□□□ 0.33
SCARB2-210ENST00000638567 PPP2R3CQ969Q6 453 aa17.13■□□□□ 0.33
SCARB2-210ENST00000638567 CYB561D2O14569 222 aa17.12■□□□□ 0.33
SCARB2-210ENST00000638567 CLPTM1O96005 669 aa17.12■□□□□ 0.33
SCARB2-210ENST00000638567 ABCG1P45844 678 aa17.12■□□□□ 0.33
SCARB2-210ENST00000638567 NUMBP49757 651 aa17.12■□□□□ 0.33
SCARB2-210ENST00000638567 KYQ8NBH2 561 aa17.12■□□□□ 0.33
SCARB2-210ENST00000638567 LRRN4Q8WUT4 740 aa17.12■□□□□ 0.33
SCARB2-210ENST00000638567 OSMRQ99650 979 aa17.12■□□□□ 0.33
SCARB2-210ENST00000638567 ETNK2Q9NVF9 386 aa17.12■□□□□ 0.33
SCARB2-210ENST00000638567 ADGRA2Q96PE1 1338 aa17.12■□□□□ 0.33
SCARB2-210ENST00000638567 H3BRB1 525 aa17.12■□□□□ 0.33
SCARB2-210ENST00000638567 B3GAT3O94766 335 aa17.12■□□□□ 0.33
SCARB2-210ENST00000638567 PEX5P50542 639 aa17.12■□□□□ 0.33
SCARB2-210ENST00000638567 MAP3K7CLP57077 242 aa17.12■□□□□ 0.33
SCARB2-210ENST00000638567 UNC45BQ8IWX7 931 aa17.12■□□□□ 0.33
SCARB2-210ENST00000638567 SNX19Q92543 992 aa17.12■□□□□ 0.33
SCARB2-210ENST00000638567 TUT1Q9H6E5 874 aaKnown RBP17.12■□□□□ 0.33
SCARB2-210ENST00000638567 GRHL1Q9NZI5 618 aa17.12■□□□□ 0.33
SCARB2-210ENST00000638567 NCKIPSDQ9NZQ3 722 aa17.12■□□□□ 0.33
SCARB2-210ENST00000638567 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.12■□□□□ 0.33
SCARB2-210ENST00000638567 RGPD8O14715 1765 aaPredicted RBP17.12■□□□□ 0.33
SCARB2-210ENST00000638567 A8MUI8 341 aa17.12■□□□□ 0.33
SCARB2-210ENST00000638567 GOLGA8TH3BQL2 631 aa17.12■□□□□ 0.33
SCARB2-210ENST00000638567 TRDMT1O14717 391 aaKnown RBP17.12■□□□□ 0.33
SCARB2-210ENST00000638567 NME5P56597 212 aa17.12■□□□□ 0.33
SCARB2-210ENST00000638567 REPS2Q8NFH8 660 aa17.12■□□□□ 0.33
SCARB2-210ENST00000638567 URGCPQ8TCY9 931 aa17.12■□□□□ 0.33
SCARB2-210ENST00000638567 PYDC1Q8WXC3 89 aa17.12■□□□□ 0.33
SCARB2-210ENST00000638567 TUBGCP3Q96CW5 907 aa17.12■□□□□ 0.33
SCARB2-210ENST00000638567 CELF6Q96J87 481 aaKnown RBP17.12■□□□□ 0.33
SCARB2-210ENST00000638567 GID8Q9NWU2 228 aa17.12■□□□□ 0.33
SCARB2-210ENST00000638567 KDM4FA0A1W2PPD8 638 aa17.12■□□□□ 0.33
SCARB2-210ENST00000638567 LYPLA2O95372 231 aa17.12■□□□□ 0.33
SCARB2-210ENST00000638567 CCNE2O96020 404 aa17.12■□□□□ 0.33
SCARB2-210ENST00000638567 ZNF286BP0CG31 522 aa17.12■□□□□ 0.33
SCARB2-210ENST00000638567 ACAT1P24752 427 aaKnown RBP17.12■□□□□ 0.33
SCARB2-210ENST00000638567 PTGIRP43119 386 aa17.12■□□□□ 0.33
SCARB2-210ENST00000638567 OAZ1P54368 228 aa17.12■□□□□ 0.33
SCARB2-210ENST00000638567 SLC6A3Q01959 620 aa17.12■□□□□ 0.33
SCARB2-210ENST00000638567 CAPSQ13938 189 aa17.12■□□□□ 0.33
SCARB2-210ENST00000638567 PAN2Q504Q3 1202 aaKnown RBP17.12■□□□□ 0.33
SCARB2-210ENST00000638567 ASIC4Q96FT7 647 aa17.12■□□□□ 0.33
SCARB2-210ENST00000638567 CATSPER2Q96P56 530 aa17.12■□□□□ 0.33
SCARB2-210ENST00000638567 FAM8A1Q9UBU6 413 aa17.12■□□□□ 0.33
SCARB2-210ENST00000638567 RPTORQ8N122 1335 aa17.11■□□□□ 0.33
SCARB2-210ENST00000638567 TMEM191CA6NGB0 347 aa17.11■□□□□ 0.33
SCARB2-210ENST00000638567 F9P00740 461 aa17.11■□□□□ 0.33
SCARB2-210ENST00000638567 HSPA1AP0DMV8 641 aaKnown RBP17.11■□□□□ 0.33
SCARB2-210ENST00000638567 HSPA1BP0DMV9 641 aaKnown RBP17.11■□□□□ 0.33
SCARB2-210ENST00000638567 TKTL1P51854 596 aa17.11■□□□□ 0.33
SCARB2-210ENST00000638567 TGFB2P61812 414 aa17.11■□□□□ 0.33
SCARB2-210ENST00000638567 ADIGQ0VDE8 80 aa17.11■□□□□ 0.33
SCARB2-210ENST00000638567 POU6F1Q14863 301 aa17.11■□□□□ 0.33
SCARB2-210ENST00000638567 TTC33Q6PID6 262 aaPredicted RBP17.11■□□□□ 0.33
SCARB2-210ENST00000638567 ECHDC2Q86YB7 292 aa17.11■□□□□ 0.33
SCARB2-210ENST00000638567 CPNE8Q86YQ8 564 aa17.11■□□□□ 0.33
SCARB2-210ENST00000638567 LRRC39Q96DD0 335 aa17.11■□□□□ 0.33
SCARB2-210ENST00000638567 TMEM134Q9H6X4 195 aa17.11■□□□□ 0.33
SCARB2-210ENST00000638567 NDUFA13Q9P0J0 144 aa17.11■□□□□ 0.33
SCARB2-210ENST00000638567 AAR2Q9Y312 384 aaKnown RBP17.11■□□□□ 0.33
SCARB2-210ENST00000638567 IGKV6D-41A0A0C4DH26 115 aa17.11■□□□□ 0.33
SCARB2-210ENST00000638567 C2CD2LO14523 706 aa17.11■□□□□ 0.33
SCARB2-210ENST00000638567 PSMC3P17980 439 aa17.11■□□□□ 0.33
SCARB2-210ENST00000638567 MMP8P22894 467 aa17.11■□□□□ 0.33
SCARB2-210ENST00000638567 CSHL1Q14406 222 aa17.11■□□□□ 0.33
SCARB2-210ENST00000638567 POLNQ7Z5Q5 900 aa17.11■□□□□ 0.33
SCARB2-210ENST00000638567 DEFB106AQ8N104 65 aa17.11■□□□□ 0.33
SCARB2-210ENST00000638567 ZNF786Q8N393 782 aa17.11■□□□□ 0.33
SCARB2-210ENST00000638567 ADAM32Q8TC27 787 aa17.11■□□□□ 0.33
SCARB2-210ENST00000638567 PIWIL2Q8TC59 973 aaKnown RBP17.11■□□□□ 0.33
SCARB2-210ENST00000638567 GDPD5Q8WTR4 605 aa17.11■□□□□ 0.33
SCARB2-210ENST00000638567 OLA1Q9NTK5 396 aaKnown RBP17.11■□□□□ 0.33
SCARB2-210ENST00000638567 RNF19AQ9NV58 838 aa17.11■□□□□ 0.33
SCARB2-210ENST00000638567 SLC17A7Q9P2U7 560 aa17.11■□□□□ 0.33
SCARB2-210ENST00000638567 ASS1P00966 412 aaKnown RBP17.11■□□□□ 0.33
SCARB2-210ENST00000638567 CYP2B6P20813 491 aa17.11■□□□□ 0.33
SCARB2-210ENST00000638567 HSPA13P48723 471 aa17.11■□□□□ 0.33
SCARB2-210ENST00000638567 GEMP55040 296 aa17.11■□□□□ 0.33
SCARB2-210ENST00000638567 ZNF398Q8TD17 642 aa17.11■□□□□ 0.33
SCARB2-210ENST00000638567 DACT3Q96B18 629 aaPredicted RBP17.11■□□□□ 0.33
SCARB2-210ENST00000638567 ASPSCR1Q9BZE9 553 aa17.11■□□□□ 0.33
SCARB2-210ENST00000638567 DMAC2Q9NW81 257 aa17.11■□□□□ 0.33
SCARB2-210ENST00000638567 ZNF212Q9UDV6 495 aa17.11■□□□□ 0.33
SCARB2-210ENST00000638567 PPME1Q9Y570 386 aa17.11■□□□□ 0.33
SCARB2-210ENST00000638567 TCRBV9S1A1TA0A576 114 aa17.1■□□□□ 0.33
SCARB2-210ENST00000638567 CHADO15335 359 aa17.1■□□□□ 0.33
SCARB2-210ENST00000638567 AVILO75366 819 aa17.1■□□□□ 0.33
SCARB2-210ENST00000638567 KCNK10P57789 538 aa17.1■□□□□ 0.33
SCARB2-210ENST00000638567 YWHAZP63104 245 aaKnown RBP17.1■□□□□ 0.33
SCARB2-210ENST00000638567 USP6NLQ92738 828 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms