RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 SDK1Q7Z5N4 2213 aa17.53■□□□□ 0.4
CACNA1A-259ENST00000638114 CEP250Q9BV73 2442 aa17.53■□□□□ 0.4
CACNA1A-259ENST00000638114 DMXL1Q9Y485 3027 aa17.53■□□□□ 0.4
CACNA1A-259ENST00000638114 SGK1O00141 431 aa17.53■□□□□ 0.4
CACNA1A-259ENST00000638114 CHRM1P11229 460 aaPredicted RBP17.53■□□□□ 0.4
CACNA1A-259ENST00000638114 SLC9A1P19634 815 aa17.53■□□□□ 0.4
CACNA1A-259ENST00000638114 CHKAP35790 457 aa17.53■□□□□ 0.4
CACNA1A-259ENST00000638114 EOGTQ5NDL2 527 aa17.53■□□□□ 0.4
CACNA1A-259ENST00000638114 ENOSF1Q7L5Y1 443 aa17.53■□□□□ 0.4
CACNA1A-259ENST00000638114 KBTBD6Q86V97 674 aa17.53■□□□□ 0.4
CACNA1A-259ENST00000638114 FMNL3Q8IVF7 1028 aa17.53■□□□□ 0.4
CACNA1A-259ENST00000638114 FAM114A1Q8IWE2 563 aa17.53■□□□□ 0.4
CACNA1A-259ENST00000638114 SCML4Q8N228 414 aa17.53■□□□□ 0.4
CACNA1A-259ENST00000638114 ZNF513Q8N8E2 541 aaPredicted RBP17.53■□□□□ 0.4
CACNA1A-259ENST00000638114 PLD4Q96BZ4 506 aa17.53■□□□□ 0.4
CACNA1A-259ENST00000638114 TPSD1Q9BZJ3 242 aa17.53■□□□□ 0.4
CACNA1A-259ENST00000638114 THAP9Q9H5L6 903 aa17.53■□□□□ 0.4
CACNA1A-259ENST00000638114 ABCC13Q9NSE7 274 aa17.53■□□□□ 0.4
CACNA1A-259ENST00000638114 LMBRD1Q9NUN5 540 aa17.53■□□□□ 0.4
CACNA1A-259ENST00000638114 SFMBT1Q9UHJ3 866 aa17.53■□□□□ 0.4
CACNA1A-259ENST00000638114 AGO1Q9UL18 857 aaKnown RBP17.53■□□□□ 0.4
CACNA1A-259ENST00000638114 MYO18AQ92614 2054 aaKnown RBP17.52■□□□□ 0.4
CACNA1A-259ENST00000638114 GABBR2O75899 941 aa17.52■□□□□ 0.4
CACNA1A-259ENST00000638114 ALDH1A2O94788 518 aa17.52■□□□□ 0.4
CACNA1A-259ENST00000638114 LETM1O95202 739 aaPredicted RBP17.52■□□□□ 0.4
CACNA1A-259ENST00000638114 USP8P40818 1118 aa17.52■□□□□ 0.4
CACNA1A-259ENST00000638114 DGKGP49619 791 aa17.52■□□□□ 0.4
CACNA1A-259ENST00000638114 ARHGAP44Q17R89 818 aa17.52■□□□□ 0.4
CACNA1A-259ENST00000638114 EXOC3L4Q17RC7 722 aa17.52■□□□□ 0.4
CACNA1A-259ENST00000638114 TMEM92Q6UXU6 159 aa17.52■□□□□ 0.4
CACNA1A-259ENST00000638114 TOGARAM2Q6ZUX3 1019 aa17.52■□□□□ 0.4
CACNA1A-259ENST00000638114 TRMT11Q7Z4G4 463 aaKnown RBP17.52■□□□□ 0.4
CACNA1A-259ENST00000638114 IRGQQ8WZA9 623 aa17.52■□□□□ 0.4
CACNA1A-259ENST00000638114 GOLGA1Q92805 767 aa17.52■□□□□ 0.4
CACNA1A-259ENST00000638114 RMDN1Q96DB5 314 aa17.52■□□□□ 0.4
CACNA1A-259ENST00000638114 HSFY1Q96LI6 401 aa17.52■□□□□ 0.4
CACNA1A-259ENST00000638114 FAM81BQ96LP2 452 aa17.52■□□□□ 0.4
CACNA1A-259ENST00000638114 GBP4Q96PP9 640 aa17.52■□□□□ 0.4
CACNA1A-259ENST00000638114 MIS12Q9H081 205 aa17.52■□□□□ 0.4
CACNA1A-259ENST00000638114 POLMQ9NP87 494 aaPredicted RBP17.52■□□□□ 0.4
CACNA1A-259ENST00000638114 APEX2Q9UBZ4 518 aa17.52■□□□□ 0.4
CACNA1A-259ENST00000638114 GTPBP10A4D1E9 387 aaKnown RBP17.51■□□□□ 0.39
CACNA1A-259ENST00000638114 DCLK1O15075 740 aa17.51■□□□□ 0.39
CACNA1A-259ENST00000638114 THAP12O43422 761 aa17.51■□□□□ 0.39
CACNA1A-259ENST00000638114 MED7O43513 233 aa17.51■□□□□ 0.39
CACNA1A-259ENST00000638114 LRP3O75074 770 aa17.51■□□□□ 0.39
CACNA1A-259ENST00000638114 LTFP02788 710 aa17.51■□□□□ 0.39
CACNA1A-259ENST00000638114 HNRNPLP14866 589 aaKnown RBP eCLIP17.51■□□□□ 0.39
CACNA1A-259ENST00000638114 TGM1P22735 817 aa17.51■□□□□ 0.39
CACNA1A-259ENST00000638114 ERCC5P28715 1186 aaPredicted RBP17.51■□□□□ 0.39
CACNA1A-259ENST00000638114 GNA15P30679 374 aa17.51■□□□□ 0.39
CACNA1A-259ENST00000638114 HARS2P49590 506 aaKnown RBP17.51■□□□□ 0.39
CACNA1A-259ENST00000638114 APBA1Q02410 837 aa17.51■□□□□ 0.39
CACNA1A-259ENST00000638114 LMNB2Q03252 620 aa17.51■□□□□ 0.39
CACNA1A-259ENST00000638114 TRIP4Q15650 581 aaPredicted RBP17.51■□□□□ 0.39
CACNA1A-259ENST00000638114 MAN2A1Q16706 1144 aa17.51■□□□□ 0.39
CACNA1A-259ENST00000638114 HSP90AA4PQ58FG1 418 aa17.51■□□□□ 0.39
CACNA1A-259ENST00000638114 RALGAPA1Q6GYQ0 2036 aa17.51■□□□□ 0.39
CACNA1A-259ENST00000638114 DENND1BQ6P3S1 775 aa17.51■□□□□ 0.39
CACNA1A-259ENST00000638114 RASSF3Q86WH2 238 aa17.51■□□□□ 0.39
CACNA1A-259ENST00000638114 MDGA1Q8NFP4 955 aa17.51■□□□□ 0.39
CACNA1A-259ENST00000638114 KCNV2Q8TDN2 545 aa17.51■□□□□ 0.39
CACNA1A-259ENST00000638114 CLEC4CQ8WTT0 213 aa17.51■□□□□ 0.39
CACNA1A-259ENST00000638114 ST7Q9NRC1 585 aa17.51■□□□□ 0.39
CACNA1A-259ENST00000638114 BCCIPQ9P287 314 aaKnown RBP eCLIP17.51■□□□□ 0.39
CACNA1A-259ENST00000638114 INVSQ9Y283 1065 aa17.51■□□□□ 0.39
CACNA1A-259ENST00000638114 HBS1LQ9Y450 684 aaKnown RBP17.51■□□□□ 0.39
CACNA1A-259ENST00000638114 MSI1O43347 362 aaKnown RBP17.5■□□□□ 0.39
CACNA1A-259ENST00000638114 ADAM23O75077 832 aa17.5■□□□□ 0.39
CACNA1A-259ENST00000638114 FBXO21O94952 628 aa17.5■□□□□ 0.39
CACNA1A-259ENST00000638114 PENKP01210 267 aaPredicted RBP17.5■□□□□ 0.39
CACNA1A-259ENST00000638114 CYBBP04839 570 aa17.5■□□□□ 0.39
CACNA1A-259ENST00000638114 PRKCSHP14314 528 aaPredicted RBP17.5■□□□□ 0.39
CACNA1A-259ENST00000638114 PON1P27169 355 aa17.5■□□□□ 0.39
CACNA1A-259ENST00000638114 GBP1P32455 592 aa17.5■□□□□ 0.39
CACNA1A-259ENST00000638114 WASP42768 502 aa17.5■□□□□ 0.39
CACNA1A-259ENST00000638114 GPD2P43304 727 aa17.5■□□□□ 0.39
CACNA1A-259ENST00000638114 ELF2Q15723 593 aa17.5■□□□□ 0.39
CACNA1A-259ENST00000638114 PLK5Q496M5 336 aa17.5■□□□□ 0.39
CACNA1A-259ENST00000638114 USP39Q53GS9 565 aaKnown RBP17.5■□□□□ 0.39
CACNA1A-259ENST00000638114 FYB2Q5VWT5 728 aa17.5■□□□□ 0.39
CACNA1A-259ENST00000638114 EGFLAMQ63HQ2 1017 aa17.5■□□□□ 0.39
CACNA1A-259ENST00000638114 P2RY11Q96G91 374 aa17.5■□□□□ 0.39
CACNA1A-259ENST00000638114 LOXL4Q96JB6 756 aa17.5■□□□□ 0.39
CACNA1A-259ENST00000638114 ACP6Q9NPH0 428 aa17.5■□□□□ 0.39
CACNA1A-259ENST00000638114 SEMA4GQ9NTN9 838 aa17.5■□□□□ 0.39
CACNA1A-259ENST00000638114 STARD13Q9Y3M8 1113 aa17.5■□□□□ 0.39
CACNA1A-259ENST00000638114 TCRBV21S2A2A0A5A6 115 aa17.49■□□□□ 0.39
CACNA1A-259ENST00000638114 BECN2A8MW95 431 aa17.49■□□□□ 0.39
CACNA1A-259ENST00000638114 PRRT4C9JH25 899 aa17.49■□□□□ 0.39
CACNA1A-259ENST00000638114 CISD3P0C7P0 127 aa17.49■□□□□ 0.39
CACNA1A-259ENST00000638114 HOXB2P14652 356 aa17.49■□□□□ 0.39
CACNA1A-259ENST00000638114 NTSR1P30989 418 aa17.49■□□□□ 0.39
CACNA1A-259ENST00000638114 ACADSBP45954 432 aa17.49■□□□□ 0.39
CACNA1A-259ENST00000638114 RSPO4Q2I0M5 234 aaPredicted RBP17.49■□□□□ 0.39
CACNA1A-259ENST00000638114 MSANTD2Q6P1R3 559 aa17.49■□□□□ 0.39
CACNA1A-259ENST00000638114 CHPFQ8IZ52 775 aa17.49■□□□□ 0.39
CACNA1A-259ENST00000638114 CPXM2Q8N436 756 aa17.49■□□□□ 0.39
CACNA1A-259ENST00000638114 HMGB4Q8WW32 186 aa17.49■□□□□ 0.39
CACNA1A-259ENST00000638114 ZNF606Q8WXB4 792 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms