RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 PRRT4C9JH25 899 aa18.56■□□□□ 0.56
PNKP-230ENST00000638016 KRT5P13647 590 aa18.56■□□□□ 0.56
PNKP-230ENST00000638016 DAOAP59103 153 aa18.56■□□□□ 0.56
PNKP-230ENST00000638016 CNGA2Q16280 664 aa18.56■□□□□ 0.56
PNKP-230ENST00000638016 RSPO4Q2I0M5 234 aaPredicted RBP18.56■□□□□ 0.56
PNKP-230ENST00000638016 BSPRYQ5W0U4 402 aa18.56■□□□□ 0.56
PNKP-230ENST00000638016 EGFLAMQ63HQ2 1017 aa18.56■□□□□ 0.56
PNKP-230ENST00000638016 GRAMD4Q6IC98 578 aa18.56■□□□□ 0.56
PNKP-230ENST00000638016 TADA2BQ86TJ2 420 aa18.56■□□□□ 0.56
PNKP-230ENST00000638016 FMNL3Q8IVF7 1028 aa18.56■□□□□ 0.56
PNKP-230ENST00000638016 ARHGAP18Q8N392 663 aa18.56■□□□□ 0.56
PNKP-230ENST00000638016 KCTD13Q8WZ19 329 aa18.56■□□□□ 0.56
PNKP-230ENST00000638016 ACOX2Q99424 681 aa18.56■□□□□ 0.56
PNKP-230ENST00000638016 LMBRD1Q9NUN5 540 aa18.56■□□□□ 0.56
PNKP-230ENST00000638016 KIAA1257Q9ULG3 409 aa18.56■□□□□ 0.56
PNKP-230ENST00000638016 CLEC4EQ9ULY5 219 aa18.56■□□□□ 0.56
PNKP-230ENST00000638016 BCKDHBP21953 392 aa18.55■□□□□ 0.56
PNKP-230ENST00000638016 PLK5Q496M5 336 aa18.55■□□□□ 0.56
PNKP-230ENST00000638016 FYB2Q5VWT5 728 aa18.55■□□□□ 0.56
PNKP-230ENST00000638016 DENND1BQ6P3S1 775 aa18.55■□□□□ 0.56
PNKP-230ENST00000638016 TRIM65Q6PJ69 517 aa18.55■□□□□ 0.56
PNKP-230ENST00000638016 CACNA2D4Q7Z3S7 1137 aa18.55■□□□□ 0.56
PNKP-230ENST00000638016 RASSF3Q86WH2 238 aa18.55■□□□□ 0.56
PNKP-230ENST00000638016 FRMD1Q8N878 549 aa18.55■□□□□ 0.56
PNKP-230ENST00000638016 ZNF513Q8N8E2 541 aaPredicted RBP18.55■□□□□ 0.56
PNKP-230ENST00000638016 RLN3Q8WXF3 142 aa18.55■□□□□ 0.56
PNKP-230ENST00000638016 CDK5RAP1Q96SZ6 601 aaKnown RBP18.55■□□□□ 0.56
PNKP-230ENST00000638016 MIS12Q9H081 205 aa18.55■□□□□ 0.56
PNKP-230ENST00000638016 NUP62CLQ9H1M0 184 aa18.55■□□□□ 0.56
PNKP-230ENST00000638016 ARRDC1-AS1Q9H2J1 176 aa18.55■□□□□ 0.56
PNKP-230ENST00000638016 SEMA4GQ9NTN9 838 aa18.55■□□□□ 0.56
PNKP-230ENST00000638016 EBF1Q9UH73 591 aa18.55■□□□□ 0.56
PNKP-230ENST00000638016 THADAQ6YHU6 1953 aa18.55■□□□□ 0.56
PNKP-230ENST00000638016 GON4LQ3T8J9 2241 aa18.54■□□□□ 0.56
PNKP-230ENST00000638016 BECN2A8MW95 431 aa18.54■□□□□ 0.56
PNKP-230ENST00000638016 FGFR1OPO95684 399 aaKnown RBP18.54■□□□□ 0.56
PNKP-230ENST00000638016 CISD3P0C7P0 127 aa18.54■□□□□ 0.56
PNKP-230ENST00000638016 TNFRSF4P43489 277 aa18.54■□□□□ 0.56
PNKP-230ENST00000638016 COG7P83436 770 aa18.54■□□□□ 0.56
PNKP-230ENST00000638016 ARHGAP44Q17R89 818 aa18.54■□□□□ 0.56
PNKP-230ENST00000638016 MLKLQ8NB16 471 aa18.54■□□□□ 0.56
PNKP-230ENST00000638016 DUSP15Q9H1R2 295 aaPredicted RBP18.54■□□□□ 0.56
PNKP-230ENST00000638016 CNGB3Q9NQW8 809 aa18.54■□□□□ 0.56
PNKP-230ENST00000638016 CYTH4Q9UIA0 394 aa18.54■□□□□ 0.56
PNKP-230ENST00000638016 STRIP2Q9ULQ0 834 aa18.54■□□□□ 0.56
PNKP-230ENST00000638016 CNTN6Q9UQ52 1028 aa18.54■□□□□ 0.56
PNKP-230ENST00000638016 TCRBV21S2A2A0A5A6 115 aa18.53■□□□□ 0.56
PNKP-230ENST00000638016 GDF9O60383 454 aa18.53■□□□□ 0.56
PNKP-230ENST00000638016 LETM1O95202 739 aaPredicted RBP18.53■□□□□ 0.56
PNKP-230ENST00000638016 PENKP01210 267 aaPredicted RBP18.53■□□□□ 0.56
PNKP-230ENST00000638016 PNMA6AP0CW24 399 aaPredicted RBP18.53■□□□□ 0.56
PNKP-230ENST00000638016 MTIF2P46199 727 aaKnown RBP18.53■□□□□ 0.56
PNKP-230ENST00000638016 DGKGP49619 791 aa18.53■□□□□ 0.56
PNKP-230ENST00000638016 SF3A2Q15428 464 aaKnown RBP18.53■□□□□ 0.56
PNKP-230ENST00000638016 TRIP4Q15650 581 aaPredicted RBP18.53■□□□□ 0.56
PNKP-230ENST00000638016 CCDC26Q8TAB7 109 aa18.53■□□□□ 0.56
PNKP-230ENST00000638016 RNF139Q8WU17 664 aa18.53■□□□□ 0.56
PNKP-230ENST00000638016 HMGB4Q8WW32 186 aa18.53■□□□□ 0.56
PNKP-230ENST00000638016 XPO6Q96QU8 1125 aaKnown RBP18.53■□□□□ 0.56
PNKP-230ENST00000638016 SIX2Q9NPC8 291 aa18.53■□□□□ 0.56
PNKP-230ENST00000638016 RXFP3Q9NSD7 469 aa18.53■□□□□ 0.56
PNKP-230ENST00000638016 WDR35Q9P2L0 1181 aa18.53■□□□□ 0.56
PNKP-230ENST00000638016 TJP2Q9UDY2 1190 aa18.53■□□□□ 0.56
PNKP-230ENST00000638016 CACNA1AO00555 2505 aa18.53■□□□□ 0.56
PNKP-230ENST00000638016 NUP205Q92621 2012 aa18.52■□□□□ 0.56
PNKP-230ENST00000638016 TSPAN3O60637 253 aa18.52■□□□□ 0.56
PNKP-230ENST00000638016 EPN2O95208 641 aa18.52■□□□□ 0.56
PNKP-230ENST00000638016 PON1P27169 355 aa18.52■□□□□ 0.56
PNKP-230ENST00000638016 GBP1P32455 592 aa18.52■□□□□ 0.56
PNKP-230ENST00000638016 GPD2P43304 727 aa18.52■□□□□ 0.56
PNKP-230ENST00000638016 TPD52L1Q16890 204 aaPredicted RBP18.52■□□□□ 0.56
PNKP-230ENST00000638016 GEN1Q17RS7 908 aa18.52■□□□□ 0.56
PNKP-230ENST00000638016 EOGTQ5NDL2 527 aa18.52■□□□□ 0.56
PNKP-230ENST00000638016 KIAA1211LQ6NV74 962 aa18.52■□□□□ 0.56
PNKP-230ENST00000638016 PRR23CQ6ZRP0 262 aa18.52■□□□□ 0.56
PNKP-230ENST00000638016 GPT2Q8TD30 523 aa18.52■□□□□ 0.56
PNKP-230ENST00000638016 PLD4Q96BZ4 506 aa18.52■□□□□ 0.56
PNKP-230ENST00000638016 DLL3Q9NYJ7 618 aa18.52■□□□□ 0.56
PNKP-230ENST00000638016 RAD54BQ9Y620 910 aa18.52■□□□□ 0.56
PNKP-230ENST00000638016 WASH3PC4AMC7 463 aa18.51■□□□□ 0.55
PNKP-230ENST00000638016 THAP12O43422 761 aa18.51■□□□□ 0.55
PNKP-230ENST00000638016 FYNP06241 537 aa18.51■□□□□ 0.55
PNKP-230ENST00000638016 GNA15P30679 374 aa18.51■□□□□ 0.55
PNKP-230ENST00000638016 USP8P40818 1118 aa18.51■□□□□ 0.55
PNKP-230ENST00000638016 SGSHP51688 502 aa18.51■□□□□ 0.55
PNKP-230ENST00000638016 MFAP3P55082 362 aa18.51■□□□□ 0.55
PNKP-230ENST00000638016 STILQ15468 1287 aa18.51■□□□□ 0.55
PNKP-230ENST00000638016 EXOC3L4Q17RC7 722 aa18.51■□□□□ 0.55
PNKP-230ENST00000638016 MIIPQ5JXC2 388 aa18.51■□□□□ 0.55
PNKP-230ENST00000638016 TCEAL6Q6IPX3 200 aa18.51■□□□□ 0.55
PNKP-230ENST00000638016 GBP6Q6ZN66 633 aa18.51■□□□□ 0.55
PNKP-230ENST00000638016 CLEC17AQ6ZS10 378 aa18.51■□□□□ 0.55
PNKP-230ENST00000638016 SCUBE3Q8IX30 993 aa18.51■□□□□ 0.55
PNKP-230ENST00000638016 SCML4Q8N228 414 aa18.51■□□□□ 0.55
PNKP-230ENST00000638016 TCEAL3Q969E4 200 aa18.51■□□□□ 0.55
PNKP-230ENST00000638016 PIWIL1Q96J94 861 aaKnown RBP18.51■□□□□ 0.55
PNKP-230ENST00000638016 ZC3H10Q96K80 434 aaKnown RBP18.51■□□□□ 0.55
PNKP-230ENST00000638016 DCLK3Q9C098 648 aa18.51■□□□□ 0.55
PNKP-230ENST00000638016 SLC6A17Q9H1V8 727 aa18.51■□□□□ 0.55
PNKP-230ENST00000638016 CD93Q9NPY3 652 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms