RNA–Protein interactions for RNA: ENST00000637033.1

CHRNA7-223, Transcript of cholinergic receptor nicotinic alpha 7 subunit, human

TSL 5 BASIC

Gene CHRNA7, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHRNA7-223	ENST00000637033	ANKRD36BP1	Q96IX9	119 aa		13.49	□□□□□ -0.25
CHRNA7-223	ENST00000637033	DNAJC1	Q96KC8	554 aa	Known RBP	13.49	□□□□□ -0.25
CHRNA7-223	ENST00000637033	ZNF778	Q96MU6	729 aa		13.49	□□□□□ -0.25
CHRNA7-223	ENST00000637033	GCNA	Q96QF7	691 aa		13.49	□□□□□ -0.25
CHRNA7-223	ENST00000637033	ACO2	Q99798	780 aa	Known RBP	13.49	□□□□□ -0.25
CHRNA7-223	ENST00000637033	WWP1	Q9H0M0	922 aa		13.49	□□□□□ -0.25
CHRNA7-223	ENST00000637033	ADAMTS6	Q9UKP5	1117 aa		13.49	□□□□□ -0.25
CHRNA7-223	ENST00000637033	CNTN6	Q9UQ52	1028 aa		13.49	□□□□□ -0.25
CHRNA7-223	ENST00000637033	ASB3	Q9Y575	518 aa		13.49	□□□□□ -0.25
CHRNA7-223	ENST00000637033	STYXL1	Q9Y6J8	313 aa		13.49	□□□□□ -0.25
CHRNA7-223	ENST00000637033	CAPN14	A8MX76	684 aa		13.49	□□□□□ -0.25
CHRNA7-223	ENST00000637033	DKC1	O60832	514 aa	Known RBP eCLIP	13.49	□□□□□ -0.25
CHRNA7-223	ENST00000637033	LSM8	O95777	96 aa	Known RBP	13.49	□□□□□ -0.25
CHRNA7-223	ENST00000637033	CALR	P27797	417 aa	Known RBP	13.49	□□□□□ -0.25
CHRNA7-223	ENST00000637033	MLH1	P40692	756 aa		13.49	□□□□□ -0.25
CHRNA7-223	ENST00000637033	CCR10	P46092	362 aa		13.49	□□□□□ -0.25
CHRNA7-223	ENST00000637033	BACE1	P56817	501 aa		13.49	□□□□□ -0.25
CHRNA7-223	ENST00000637033	BTK	Q06187	659 aa		13.49	□□□□□ -0.25
CHRNA7-223	ENST00000637033	HIC1	Q14526	733 aa		13.49	□□□□□ -0.25
CHRNA7-223	ENST00000637033	STXBP2	Q15833	593 aa		13.49	□□□□□ -0.25
CHRNA7-223	ENST00000637033	ARHGAP24	Q8N264	748 aa		13.49	□□□□□ -0.25
CHRNA7-223	ENST00000637033	PQLC3	Q8N755	202 aa		13.49	□□□□□ -0.25
CHRNA7-223	ENST00000637033	ZNF398	Q8TD17	642 aa		13.49	□□□□□ -0.25
CHRNA7-223	ENST00000637033	CNKSR2	Q8WXI2	1034 aa		13.49	□□□□□ -0.25
CHRNA7-223	ENST00000637033	MARK4	Q96L34	752 aa		13.49	□□□□□ -0.25
CHRNA7-223	ENST00000637033	LGMN	Q99538	433 aa		13.49	□□□□□ -0.25
CHRNA7-223	ENST00000637033	SIX4	Q9UIU6	781 aa		13.49	□□□□□ -0.25
CHRNA7-223	ENST00000637033	ANGPTL2	Q9UKU9	493 aa		13.49	□□□□□ -0.25
CHRNA7-223	ENST00000637033	SPATA31C2	B4DYI2	1134 aa		13.48	□□□□□ -0.25
CHRNA7-223	ENST00000637033	TPP1	O14773	563 aa		13.48	□□□□□ -0.25
CHRNA7-223	ENST00000637033	OGT	O15294	1046 aa		13.48	□□□□□ -0.25
CHRNA7-223	ENST00000637033	TM7SF2	O76062	418 aa		13.48	□□□□□ -0.25
CHRNA7-223	ENST00000637033	ERVK-10	P10266	1014 aa		13.48	□□□□□ -0.25
CHRNA7-223	ENST00000637033	LBR	Q14739	615 aa	Known RBP	13.48	□□□□□ -0.25
CHRNA7-223	ENST00000637033	NOMO1	Q15155	1222 aa		13.48	□□□□□ -0.25
CHRNA7-223	ENST00000637033	ATG16L1	Q676U5	607 aa		13.48	□□□□□ -0.25
CHRNA7-223	ENST00000637033	IL31	Q6EBC2	164 aa		13.48	□□□□□ -0.25
CHRNA7-223	ENST00000637033	JADE1	Q6IE81	842 aa		13.48	□□□□□ -0.25
CHRNA7-223	ENST00000637033	NCAPG2	Q86XI2	1143 aa		13.48	□□□□□ -0.25
CHRNA7-223	ENST00000637033	C10orf107	Q8IVU9	208 aa		13.48	□□□□□ -0.25
CHRNA7-223	ENST00000637033	CMAS	Q8NFW8	434 aa	Predicted RBP	13.48	□□□□□ -0.25
CHRNA7-223	ENST00000637033	RSAD1	Q9HA92	442 aa		13.48	□□□□□ -0.25
CHRNA7-223	ENST00000637033	SYNPO2	Q9UMS6	1093 aa		13.48	□□□□□ -0.25
CHRNA7-223	ENST00000637033	PLA2G4C	Q9UP65	541 aa		13.48	□□□□□ -0.25
CHRNA7-223	ENST00000637033	LACTBL1	A8MY62	500 aa		13.48	□□□□□ -0.25
CHRNA7-223	ENST00000637033		H0YCG3	227 aa		13.48	□□□□□ -0.25
CHRNA7-223	ENST00000637033	ATG7	O95352	703 aa		13.48	□□□□□ -0.25
CHRNA7-223	ENST00000637033	APOE	P02649	317 aa		13.48	□□□□□ -0.25
CHRNA7-223	ENST00000637033	ATP6V1B1	P15313	513 aa		13.48	□□□□□ -0.25
CHRNA7-223	ENST00000637033	ARRB2	P32121	409 aa		13.48	□□□□□ -0.25
CHRNA7-223	ENST00000637033	NDST1	P52848	882 aa		13.48	□□□□□ -0.25
CHRNA7-223	ENST00000637033	RABGGTB	P53611	331 aa		13.48	□□□□□ -0.25
CHRNA7-223	ENST00000637033	SLC10A2	Q12908	348 aa	Predicted RBP	13.48	□□□□□ -0.25
CHRNA7-223	ENST00000637033	ITGA9	Q13797	1035 aa		13.48	□□□□□ -0.25
CHRNA7-223	ENST00000637033	ACOT1	Q86TX2	421 aa		13.48	□□□□□ -0.25
CHRNA7-223	ENST00000637033	TP53INP2	Q8IXH6	220 aa		13.48	□□□□□ -0.25
CHRNA7-223	ENST00000637033	UBR7	Q8N806	425 aa		13.48	□□□□□ -0.25
CHRNA7-223	ENST00000637033	TEPSIN	Q96N21	525 aa		13.48	□□□□□ -0.25
CHRNA7-223	ENST00000637033	RNF157	Q96PX1	679 aa		13.48	□□□□□ -0.25
CHRNA7-223	ENST00000637033	ASNSD1	Q9NWL6	643 aa		13.48	□□□□□ -0.25
CHRNA7-223	ENST00000637033	ZNF212	Q9UDV6	495 aa		13.48	□□□□□ -0.25
CHRNA7-223	ENST00000637033	TSPAN16	Q9UKR8	245 aa		13.48	□□□□□ -0.25
CHRNA7-223	ENST00000637033		A0A088AWK7	358 aa		13.47	□□□□□ -0.25
CHRNA7-223	ENST00000637033	AIM2	O14862	343 aa		13.47	□□□□□ -0.25
CHRNA7-223	ENST00000637033	CYP3A5	P20815	502 aa		13.47	□□□□□ -0.25
CHRNA7-223	ENST00000637033	GPD1	P21695	349 aa		13.47	□□□□□ -0.25
CHRNA7-223	ENST00000637033	IL4R	P24394	825 aa		13.47	□□□□□ -0.25
CHRNA7-223	ENST00000637033	SERPINB5	P36952	375 aa		13.47	□□□□□ -0.25
CHRNA7-223	ENST00000637033	DLG2	Q15700	870 aa		13.47	□□□□□ -0.25
CHRNA7-223	ENST00000637033	ATF7IP2	Q5U623	682 aa		13.47	□□□□□ -0.25
CHRNA7-223	ENST00000637033	PTAR1	Q7Z6K3	402 aa	Predicted RBP	13.47	□□□□□ -0.25
CHRNA7-223	ENST00000637033	SATL1	Q86VE3	508 aa		13.47	□□□□□ -0.25
CHRNA7-223	ENST00000637033	CHSY1	Q86X52	802 aa		13.47	□□□□□ -0.25
CHRNA7-223	ENST00000637033	SULF1	Q8IWU6	871 aa		13.47	□□□□□ -0.25
CHRNA7-223	ENST00000637033	GALNT15	Q8N3T1	639 aa		13.47	□□□□□ -0.25
CHRNA7-223	ENST00000637033	APOL2	Q9BQE5	337 aa		13.47	□□□□□ -0.25
CHRNA7-223	ENST00000637033	KLC2	Q9H0B6	622 aa		13.47	□□□□□ -0.25
CHRNA7-223	ENST00000637033	CAB39L	Q9H9S4	337 aa		13.47	□□□□□ -0.25
CHRNA7-223	ENST00000637033	PICK1	Q9NRD5	415 aa		13.47	□□□□□ -0.25
CHRNA7-223	ENST00000637033	KCNK4	Q9NYG8	393 aa		13.47	□□□□□ -0.25
CHRNA7-223	ENST00000637033	QSER1	Q2KHR3	1735 aa		13.47	□□□□□ -0.25
CHRNA7-223	ENST00000637033	GPR25	O00155	361 aa		13.47	□□□□□ -0.25
CHRNA7-223	ENST00000637033	DNAJC6	O75061	913 aa		13.47	□□□□□ -0.25
CHRNA7-223	ENST00000637033	KRT38	O76015	456 aa		13.47	□□□□□ -0.25
CHRNA7-223	ENST00000637033	ACTR3	P61158	418 aa		13.47	□□□□□ -0.25
CHRNA7-223	ENST00000637033	ROR2	Q01974	943 aa	Known RBP	13.47	□□□□□ -0.25
CHRNA7-223	ENST00000637033	KRT72	Q14CN4	511 aa		13.47	□□□□□ -0.25
CHRNA7-223	ENST00000637033	PHF12	Q96QT6	1004 aa		13.47	□□□□□ -0.25
CHRNA7-223	ENST00000637033	SNRNP25	Q9BV90	132 aa	Known RBP	13.47	□□□□□ -0.25
CHRNA7-223	ENST00000637033	CCDC106	Q9BWC9	280 aa		13.47	□□□□□ -0.25
CHRNA7-223	ENST00000637033	ACAD9	Q9H845	621 aa		13.47	□□□□□ -0.25
CHRNA7-223	ENST00000637033	KCNG1	Q9UIX4	513 aa		13.47	□□□□□ -0.25
CHRNA7-223	ENST00000637033	HACL1	Q9UJ83	578 aa		13.47	□□□□□ -0.25
CHRNA7-223	ENST00000637033	MAFB	Q9Y5Q3	323 aa	Predicted RBP	13.47	□□□□□ -0.25
CHRNA7-223	ENST00000637033	BPTF	Q12830	3046 aa		13.47	□□□□□ -0.25
CHRNA7-223	ENST00000637033	CAPN8	A6NHC0	703 aa		13.47	□□□□□ -0.25
CHRNA7-223	ENST00000637033	NOP56	O00567	594 aa	Known RBP	13.47	□□□□□ -0.25
CHRNA7-223	ENST00000637033	APOL1	O14791	398 aa		13.47	□□□□□ -0.25
CHRNA7-223	ENST00000637033	FAM189A1	O60320	539 aa		13.47	□□□□□ -0.25
CHRNA7-223	ENST00000637033	TBC1D12	O60347	775 aa		13.47	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms