RNA–Protein interactions for RNA: ENST00000636554.1

THUMPD1-206, Transcript of THUMP domain containing 1, humanhuman

TSL 5

Gene THUMPD1, Length 2,567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-206ENST00000636554 VCLP18206 1134 aa15.5■□□□□ 0.07
THUMPD1-206ENST00000636554 L1CAMP32004 1257 aa15.5■□□□□ 0.07
THUMPD1-206ENST00000636554 ARRB2P32121 409 aa15.5■□□□□ 0.07
THUMPD1-206ENST00000636554 SERPINB6P35237 376 aa15.5■□□□□ 0.07
THUMPD1-206ENST00000636554 LSAMPQ13449 338 aa15.5■□□□□ 0.07
THUMPD1-206ENST00000636554 TEDDM1Q5T9Z0 273 aa15.5■□□□□ 0.07
THUMPD1-206ENST00000636554 CDR2LQ86X02 465 aaPredicted RBP15.5■□□□□ 0.07
THUMPD1-206ENST00000636554 WDR75Q8IWA0 830 aaKnown RBP15.5■□□□□ 0.07
THUMPD1-206ENST00000636554 PLD5Q8N7P1 536 aa15.5■□□□□ 0.07
THUMPD1-206ENST00000636554 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.5■□□□□ 0.07
THUMPD1-206ENST00000636554 OPTNQ96CV9 577 aa15.5■□□□□ 0.07
THUMPD1-206ENST00000636554 NMD3Q96D46 503 aaKnown RBP15.5■□□□□ 0.07
THUMPD1-206ENST00000636554 ZNF302Q9NR11 478 aa15.5■□□□□ 0.07
THUMPD1-206ENST00000636554 CLIC5Q9NZA1 410 aa15.5■□□□□ 0.07
THUMPD1-206ENST00000636554 SLC4A7Q9Y6M7 1214 aa15.5■□□□□ 0.07
THUMPD1-206ENST00000636554 COMMD3-BMI1R4GMX3 469 aa15.5■□□□□ 0.07
THUMPD1-206ENST00000636554 LOC100653049A0A140TA62 436 aa15.5■□□□□ 0.07
THUMPD1-206ENST00000636554 KRT34O76011 436 aa15.5■□□□□ 0.07
THUMPD1-206ENST00000636554 KRT19P08727 400 aa15.5■□□□□ 0.07
THUMPD1-206ENST00000636554 FGF3P11487 239 aaPredicted RBP15.5■□□□□ 0.07
THUMPD1-206ENST00000636554 CDK18Q07002 472 aa15.5■□□□□ 0.07
THUMPD1-206ENST00000636554 DUOXA2Q1HG44 320 aa15.5■□□□□ 0.07
THUMPD1-206ENST00000636554 MMEL1Q495T6 779 aa15.5■□□□□ 0.07
THUMPD1-206ENST00000636554 WDR78Q5VTH9 848 aa15.5■□□□□ 0.07
THUMPD1-206ENST00000636554 SPATA24Q86W54 205 aa15.5■□□□□ 0.07
THUMPD1-206ENST00000636554 DEPDC1BQ8WUY9 529 aa15.5■□□□□ 0.07
THUMPD1-206ENST00000636554 ADPGKQ9BRR6 497 aa15.5■□□□□ 0.07
THUMPD1-206ENST00000636554 PNPOQ9NVS9 261 aa15.5■□□□□ 0.07
THUMPD1-206ENST00000636554 PGAP2Q9UHJ9 254 aa15.5■□□□□ 0.07
THUMPD1-206ENST00000636554 PACSIN3Q9UKS6 424 aa15.5■□□□□ 0.07
THUMPD1-206ENST00000636554 FAM159BA6NKW6 160 aa15.49■□□□□ 0.07
THUMPD1-206ENST00000636554 BIRC5O15392 142 aa15.49■□□□□ 0.07
THUMPD1-206ENST00000636554 ENDOD1O94919 500 aa15.49■□□□□ 0.07
THUMPD1-206ENST00000636554 METTL18O95568 372 aa15.49■□□□□ 0.07
THUMPD1-206ENST00000636554 HOXC6P09630 235 aa15.49■□□□□ 0.07
THUMPD1-206ENST00000636554 SLC1A6P48664 564 aa15.49■□□□□ 0.07
THUMPD1-206ENST00000636554 GRM2Q14416 872 aa15.49■□□□□ 0.07
THUMPD1-206ENST00000636554 LRRC23Q53EV4 343 aaPredicted RBP15.49■□□□□ 0.07
THUMPD1-206ENST00000636554 N4BP2L1Q5TBK1 243 aaPredicted RBP15.49■□□□□ 0.07
THUMPD1-206ENST00000636554 SNRNP48Q6IEG0 339 aaKnown RBP15.49■□□□□ 0.07
THUMPD1-206ENST00000636554 ARCQ7LC44 396 aa15.49■□□□□ 0.07
THUMPD1-206ENST00000636554 DEFB107AQ8IZN7 70 aa15.49■□□□□ 0.07
THUMPD1-206ENST00000636554 GSDMBQ8TAX9 411 aa15.49■□□□□ 0.07
THUMPD1-206ENST00000636554 RAB3IL1Q8TBN0 382 aa15.49■□□□□ 0.07
THUMPD1-206ENST00000636554 ZNF668Q96K58 619 aaPredicted RBP15.49■□□□□ 0.07
THUMPD1-206ENST00000636554 RNF157Q96PX1 679 aa15.49■□□□□ 0.07
THUMPD1-206ENST00000636554 KLC2Q9H0B6 622 aa15.49■□□□□ 0.07
THUMPD1-206ENST00000636554 LHX5Q9H2C1 402 aa15.49■□□□□ 0.07
THUMPD1-206ENST00000636554 POMPQ9Y244 141 aa15.49■□□□□ 0.07
THUMPD1-206ENST00000636554 LTBP4Q8N2S1 1624 aa15.49■□□□□ 0.07
THUMPD1-206ENST00000636554 UTRNP46939 3433 aa15.49■□□□□ 0.07
THUMPD1-206ENST00000636554 E2F8A0AVK6 867 aa15.49■□□□□ 0.07
THUMPD1-206ENST00000636554 M0QYV0 167 aa15.49■□□□□ 0.07
THUMPD1-206ENST00000636554 TRDMT1O14717 391 aaKnown RBP15.49■□□□□ 0.07
THUMPD1-206ENST00000636554 MAFGO15525 162 aa15.49■□□□□ 0.07
THUMPD1-206ENST00000636554 ADCY3O60266 1144 aa15.49■□□□□ 0.07
THUMPD1-206ENST00000636554 KRT81Q14533 505 aa15.49■□□□□ 0.07
THUMPD1-206ENST00000636554 PDK3Q15120 406 aa15.49■□□□□ 0.07
THUMPD1-206ENST00000636554 PGM2L1Q6PCE3 622 aa15.49■□□□□ 0.07
THUMPD1-206ENST00000636554 FRMD7Q6ZUT3 714 aa15.49■□□□□ 0.07
THUMPD1-206ENST00000636554 PHTF2Q8N3S3 785 aa15.49■□□□□ 0.07
THUMPD1-206ENST00000636554 PQLC3Q8N755 202 aa15.49■□□□□ 0.07
THUMPD1-206ENST00000636554 FAM81AQ8TBF8 368 aa15.49■□□□□ 0.07
THUMPD1-206ENST00000636554 SIGLEC10Q96LC7 697 aa15.49■□□□□ 0.07
THUMPD1-206ENST00000636554 PIH1D1Q9NWS0 290 aaKnown RBP15.49■□□□□ 0.07
THUMPD1-206ENST00000636554 APOBEC2Q9Y235 224 aaKnown RBP15.49■□□□□ 0.07
THUMPD1-206ENST00000636554 NR2E3Q9Y5X4 410 aa15.49■□□□□ 0.07
THUMPD1-206ENST00000636554 C15orf38-AP3S2A0A0A6YYH1 394 aa15.48■□□□□ 0.07
THUMPD1-206ENST00000636554 MSCO60682 206 aa15.48■□□□□ 0.07
THUMPD1-206ENST00000636554 MICAL2O94851 1124 aa15.48■□□□□ 0.07
THUMPD1-206ENST00000636554 VAV1P15498 845 aa15.48■□□□□ 0.07
THUMPD1-206ENST00000636554 ITGAXP20702 1163 aa15.48■□□□□ 0.07
THUMPD1-206ENST00000636554 IL4RP24394 825 aa15.48■□□□□ 0.07
THUMPD1-206ENST00000636554 CRADDP78560 199 aa15.48■□□□□ 0.07
THUMPD1-206ENST00000636554 GRAMD1BQ3KR37 738 aa15.48■□□□□ 0.07
THUMPD1-206ENST00000636554 ARPINQ7Z6K5 226 aa15.48■□□□□ 0.07
THUMPD1-206ENST00000636554 UBA3Q8TBC4 463 aa15.48■□□□□ 0.07
THUMPD1-206ENST00000636554 NSUN6Q8TEA1 469 aaKnown RBP15.48■□□□□ 0.07
THUMPD1-206ENST00000636554 GCNAQ96QF7 691 aa15.48■□□□□ 0.07
THUMPD1-206ENST00000636554 GMLQ99445 158 aa15.48■□□□□ 0.07
THUMPD1-206ENST00000636554 PCDHGB4Q9UN71 923 aa15.48■□□□□ 0.07
THUMPD1-206ENST00000636554 PCDHGB5Q9Y5G0 923 aa15.48■□□□□ 0.07
THUMPD1-206ENST00000636554 MAFBQ9Y5Q3 323 aaPredicted RBP15.48■□□□□ 0.07
THUMPD1-206ENST00000636554 MYO18AQ92614 2054 aaKnown RBP15.48■□□□□ 0.07
THUMPD1-206ENST00000636554 CAPN8A6NHC0 703 aa15.48■□□□□ 0.07
THUMPD1-206ENST00000636554 H3BNX3 289 aa15.48■□□□□ 0.07
THUMPD1-206ENST00000636554 ALDOAP04075 364 aaKnown RBP15.48■□□□□ 0.07
THUMPD1-206ENST00000636554 CD1EP15812 388 aa15.48■□□□□ 0.07
THUMPD1-206ENST00000636554 AP3M2P53677 418 aa15.48■□□□□ 0.07
THUMPD1-206ENST00000636554 FSTL1Q12841 308 aa15.48■□□□□ 0.07
THUMPD1-206ENST00000636554 PCLAFQ15004 111 aa15.48■□□□□ 0.07
THUMPD1-206ENST00000636554 CA9Q16790 459 aa15.48■□□□□ 0.07
THUMPD1-206ENST00000636554 XRRA1Q6P2D8 792 aa15.48■□□□□ 0.07
THUMPD1-206ENST00000636554 SCYL2Q6P3W7 929 aa15.48■□□□□ 0.07
THUMPD1-206ENST00000636554 UGT2A3Q6UWM9 527 aa15.48■□□□□ 0.07
THUMPD1-206ENST00000636554 NME8Q8N427 588 aa15.48■□□□□ 0.07
THUMPD1-206ENST00000636554 SLC4A11Q8NBS3 891 aa15.48■□□□□ 0.07
THUMPD1-206ENST00000636554 RXFP2Q8WXD0 754 aa15.48■□□□□ 0.07
THUMPD1-206ENST00000636554 MCRS1Q96EZ8 462 aa15.48■□□□□ 0.07
THUMPD1-206ENST00000636554 SORT1Q99523 831 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms