RNA–Protein interactions for RNA: ENST00000636306.1

CHD2-223, Transcript of chromodomain helicase DNA binding protein 2, human

TSL 5

Gene CHD2, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD2-223	ENST00000636306	HSPBP1	Q9NZL4	362 aa		11.13	□□□□□ -0.63
CHD2-223	ENST00000636306	GABBR1	Q9UBS5	961 aa		11.13	□□□□□ -0.63
CHD2-223	ENST00000636306	KLHL3	Q9UH77	587 aa		11.13	□□□□□ -0.63
CHD2-223	ENST00000636306	RABGEF1	Q9UJ41	708 aa		11.13	□□□□□ -0.63
CHD2-223	ENST00000636306	DNAJC12	Q9UKB3	198 aa		11.13	□□□□□ -0.63
CHD2-223	ENST00000636306	PSMD13	Q9UNM6	376 aa		11.13	□□□□□ -0.63
CHD2-223	ENST00000636306	DOLK	Q9UPQ8	538 aa		11.13	□□□□□ -0.63
CHD2-223	ENST00000636306	INPP5F	Q9Y2H2	1132 aa		11.13	□□□□□ -0.63
CHD2-223	ENST00000636306	SI	P14410	1827 aa		11.13	□□□□□ -0.63
CHD2-223	ENST00000636306	MYH9	P35579	1960 aa	Known RBP	11.13	□□□□□ -0.63
CHD2-223	ENST00000636306	LRRC37A2	A6NM11	1700 aa		11.13	□□□□□ -0.63
CHD2-223	ENST00000636306	GSTTP1	A0A1W2PQM5	241 aa		11.13	□□□□□ -0.63
CHD2-223	ENST00000636306	SPATA31C2	B4DYI2	1134 aa		11.13	□□□□□ -0.63
CHD2-223	ENST00000636306		H0YJX3	145 aa		11.13	□□□□□ -0.63
CHD2-223	ENST00000636306		K7EPI3	171 aa		11.13	□□□□□ -0.63
CHD2-223	ENST00000636306	KMO	O15229	486 aa		11.13	□□□□□ -0.63
CHD2-223	ENST00000636306	SIN3B	O75182	1162 aa		11.13	□□□□□ -0.63
CHD2-223	ENST00000636306	SUPT20HL2	P0C7V6	817 aa		11.13	□□□□□ -0.63
CHD2-223	ENST00000636306	DHRS4L1	P0CG22	281 aa		11.13	□□□□□ -0.63
CHD2-223	ENST00000636306	ADCY8	P40145	1251 aa		11.13	□□□□□ -0.63
CHD2-223	ENST00000636306	MXI1	P50539	228 aa		11.13	□□□□□ -0.63
CHD2-223	ENST00000636306	HIRA	P54198	1017 aa	Predicted RBP	11.13	□□□□□ -0.63
CHD2-223	ENST00000636306	CENPC	Q03188	943 aa		11.13	□□□□□ -0.63
CHD2-223	ENST00000636306	OVGP1	Q12889	678 aa		11.13	□□□□□ -0.63
CHD2-223	ENST00000636306	CNGA3	Q16281	694 aa		11.13	□□□□□ -0.63
CHD2-223	ENST00000636306	MOG	Q16653	247 aa		11.13	□□□□□ -0.63
CHD2-223	ENST00000636306	UGCG	Q16739	394 aa		11.13	□□□□□ -0.63
CHD2-223	ENST00000636306	CCDC142	Q17RM4	750 aa		11.13	□□□□□ -0.63
CHD2-223	ENST00000636306	SGO2	Q562F6	1265 aa		11.13	□□□□□ -0.63
CHD2-223	ENST00000636306	RIOX2	Q8IUF8	465 aa		11.13	□□□□□ -0.63
CHD2-223	ENST00000636306	C4orf33	Q8N1A6	199 aa		11.13	□□□□□ -0.63
CHD2-223	ENST00000636306	NLGN2	Q8NFZ4	835 aa		11.13	□□□□□ -0.63
CHD2-223	ENST00000636306	SLC26A7	Q8TE54	656 aa		11.13	□□□□□ -0.63
CHD2-223	ENST00000636306	PYDC1	Q8WXC3	89 aa		11.13	□□□□□ -0.63
CHD2-223	ENST00000636306	GCNA	Q96QF7	691 aa		11.13	□□□□□ -0.63
CHD2-223	ENST00000636306	PHF12	Q96QT6	1004 aa		11.13	□□□□□ -0.63
CHD2-223	ENST00000636306	RANBP9	Q96S59	729 aa		11.13	□□□□□ -0.63
CHD2-223	ENST00000636306	PRPF18	Q99633	342 aa	Known RBP	11.13	□□□□□ -0.63
CHD2-223	ENST00000636306	CCDC106	Q9BWC9	280 aa		11.13	□□□□□ -0.63
CHD2-223	ENST00000636306	INO80B	Q9C086	356 aa	Predicted RBP	11.13	□□□□□ -0.63
CHD2-223	ENST00000636306	PAIP1	Q9H074	479 aa	Known RBP	11.13	□□□□□ -0.63
CHD2-223	ENST00000636306	IGF2BP1	Q9NZI8	577 aa	Known RBP eCLIP	11.13	□□□□□ -0.63
CHD2-223	ENST00000636306	SEPT9	Q9UHD8	586 aa	Predicted RBP	11.13	□□□□□ -0.63
CHD2-223	ENST00000636306	TBX20	Q9UMR3	447 aa		11.13	□□□□□ -0.63
CHD2-223	ENST00000636306	COG5	Q9UP83	839 aa		11.13	□□□□□ -0.63
CHD2-223	ENST00000636306	SATB2	Q9UPW6	733 aa		11.13	□□□□□ -0.63
CHD2-223	ENST00000636306	RIPK3	Q9Y572	518 aa		11.13	□□□□□ -0.63
CHD2-223	ENST00000636306	AP4B1	Q9Y6B7	739 aa		11.13	□□□□□ -0.63
CHD2-223	ENST00000636306	SNCAIP	Q9Y6H5	919 aa		11.13	□□□□□ -0.63
CHD2-223	ENST00000636306	SCIN	Q9Y6U3	715 aa		11.13	□□□□□ -0.63
CHD2-223	ENST00000636306	TTC34	A8MYJ7	566 aa		11.12	□□□□□ -0.63
CHD2-223	ENST00000636306	KPNA4	O00629	521 aa	Predicted RBP	11.12	□□□□□ -0.63
CHD2-223	ENST00000636306	SLC16A4	O15374	487 aa		11.12	□□□□□ -0.63
CHD2-223	ENST00000636306	XPOT	O43592	962 aa	Known RBP	11.12	□□□□□ -0.63
CHD2-223	ENST00000636306	TIMM44	O43615	452 aa		11.12	□□□□□ -0.63
CHD2-223	ENST00000636306	FBXO21	O94952	628 aa		11.12	□□□□□ -0.63
CHD2-223	ENST00000636306	BMP10	O95393	424 aa		11.12	□□□□□ -0.63
CHD2-223	ENST00000636306	C6orf222	P0C671	652 aa	Predicted RBP	11.12	□□□□□ -0.63
CHD2-223	ENST00000636306	TRIM49	P0CI25	452 aa		11.12	□□□□□ -0.63
CHD2-223	ENST00000636306	TRIM49C	P0CI26	452 aa		11.12	□□□□□ -0.63
CHD2-223	ENST00000636306	RAG1	P15918	1043 aa		11.12	□□□□□ -0.63
CHD2-223	ENST00000636306	COMT	P21964	271 aa		11.12	□□□□□ -0.63
CHD2-223	ENST00000636306	GART	P22102	1010 aa		11.12	□□□□□ -0.63
CHD2-223	ENST00000636306	CPOX	P36551	454 aa		11.12	□□□□□ -0.63
CHD2-223	ENST00000636306	CPA2	P48052	419 aa		11.12	□□□□□ -0.63
CHD2-223	ENST00000636306	PCYT1A	P49585	367 aa		11.12	□□□□□ -0.63
CHD2-223	ENST00000636306	ACTR2	P61160	394 aa		11.12	□□□□□ -0.63
CHD2-223	ENST00000636306	PRKCE	Q02156	737 aa		11.12	□□□□□ -0.63
CHD2-223	ENST00000636306	VGLL4	Q14135	290 aa		11.12	□□□□□ -0.63
CHD2-223	ENST00000636306	E2F2	Q14209	437 aa		11.12	□□□□□ -0.63
CHD2-223	ENST00000636306	NR1D2	Q14995	579 aa		11.12	□□□□□ -0.63
CHD2-223	ENST00000636306	CYTH1	Q15438	398 aa		11.12	□□□□□ -0.63
CHD2-223	ENST00000636306	LRRC36	Q1X8D7	754 aa		11.12	□□□□□ -0.63
CHD2-223	ENST00000636306	FAM160B1	Q5W0V3	765 aa		11.12	□□□□□ -0.63
CHD2-223	ENST00000636306	PLA2G4F	Q68DD2	849 aa		11.12	□□□□□ -0.63
CHD2-223	ENST00000636306	FAAH2	Q6GMR7	532 aa		11.12	□□□□□ -0.63
CHD2-223	ENST00000636306	LBX2	Q6XYB7	198 aa		11.12	□□□□□ -0.63
CHD2-223	ENST00000636306	GLYCTK	Q8IVS8	523 aa		11.12	□□□□□ -0.63
CHD2-223	ENST00000636306	WDR75	Q8IWA0	830 aa	Known RBP	11.12	□□□□□ -0.63
CHD2-223	ENST00000636306	TRIML2	Q8N7C3	387 aa		11.12	□□□□□ -0.63
CHD2-223	ENST00000636306	PCYOX1L	Q8NBM8	494 aa		11.12	□□□□□ -0.63
CHD2-223	ENST00000636306	TTC13	Q8NBP0	860 aa		11.12	□□□□□ -0.63
CHD2-223	ENST00000636306	GSTCD	Q8NEC7	633 aa		11.12	□□□□□ -0.63
CHD2-223	ENST00000636306	TSPAN14	Q8NG11	270 aa		11.12	□□□□□ -0.63
CHD2-223	ENST00000636306	TMC2	Q8TDI7	906 aa		11.12	□□□□□ -0.63
CHD2-223	ENST00000636306	CLPTM1L	Q96KA5	538 aa		11.12	□□□□□ -0.63
CHD2-223	ENST00000636306	NTPCR	Q9BSD7	190 aa	Known RBP	11.12	□□□□□ -0.63
CHD2-223	ENST00000636306	IMPG2	Q9BZV3	1241 aa		11.12	□□□□□ -0.63
CHD2-223	ENST00000636306	THAP2	Q9H0W7	228 aa		11.12	□□□□□ -0.63
CHD2-223	ENST00000636306	SPON1	Q9HCB6	807 aa		11.12	□□□□□ -0.63
CHD2-223	ENST00000636306	CNOT11	Q9UKZ1	510 aa	Known RBP	11.12	□□□□□ -0.63
CHD2-223	ENST00000636306	SF3B1	O75533	1304 aa	Known RBP eCLIP	11.11	□□□□□ -0.63	5e-7	■■■■■ 54.3
CHD2-223	ENST00000636306	EMSY	Q7Z589	1322 aa		11.11	□□□□□ -0.63
CHD2-223	ENST00000636306	TCRBV7S2A1N4T	A0A589	114 aa		11.11	□□□□□ -0.63
CHD2-223	ENST00000636306	ANKRD34B	A5PLL1	514 aa		11.11	□□□□□ -0.63
CHD2-223	ENST00000636306	ALOX15B	O15296	676 aa		11.11	□□□□□ -0.63
CHD2-223	ENST00000636306	USP2	O75604	605 aa	Predicted RBP	11.11	□□□□□ -0.63
CHD2-223	ENST00000636306	ZBTB11	O95625	1053 aa	Predicted RBP	11.11	□□□□□ -0.63
CHD2-223	ENST00000636306	SLC25A27	O95847	323 aa		11.11	□□□□□ -0.63
CHD2-223	ENST00000636306	APOE	P02649	317 aa		11.11	□□□□□ -0.63

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