RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 LAMA1P25391 3075 aa16.38■□□□□ 0.21
SNRNP48-203ENST00000634363 SPAARA0A1B0GVQ0 90 aa16.38■□□□□ 0.21
SNRNP48-203ENST00000634363 P4HA2O15460 535 aa16.38■□□□□ 0.21
SNRNP48-203ENST00000634363 AP5Z1O43299 807 aa16.38■□□□□ 0.21
SNRNP48-203ENST00000634363 HOXB2P14652 356 aa16.38■□□□□ 0.21
SNRNP48-203ENST00000634363 GABRG2P18507 467 aa16.38■□□□□ 0.21
SNRNP48-203ENST00000634363 GFPT1Q06210 699 aaPredicted RBP16.38■□□□□ 0.21
SNRNP48-203ENST00000634363 TYRO3Q06418 890 aa16.38■□□□□ 0.21
SNRNP48-203ENST00000634363 KCNH2Q12809 1159 aa16.38■□□□□ 0.21
SNRNP48-203ENST00000634363 ORC1Q13415 861 aa16.38■□□□□ 0.21
SNRNP48-203ENST00000634363 SPDYCQ5MJ68 293 aa16.38■□□□□ 0.21
SNRNP48-203ENST00000634363 SDE2Q6IQ49 451 aa16.38■□□□□ 0.21
SNRNP48-203ENST00000634363 SLC23A3Q6PIS1 610 aa16.38■□□□□ 0.21
SNRNP48-203ENST00000634363 TPGS1Q6ZTW0 290 aa16.38■□□□□ 0.21
SNRNP48-203ENST00000634363 ETFBKMTQ8IXQ9 262 aa16.38■□□□□ 0.21
SNRNP48-203ENST00000634363 HDDC3Q8N4P3 179 aa16.38■□□□□ 0.21
SNRNP48-203ENST00000634363 TERB1Q8NA31 727 aa16.38■□□□□ 0.21
SNRNP48-203ENST00000634363 SMARCD1Q96GM5 515 aa16.38■□□□□ 0.21
SNRNP48-203ENST00000634363 DNAI2Q9GZS0 605 aa16.38■□□□□ 0.21
SNRNP48-203ENST00000634363 CYP3A43Q9HB55 503 aa16.38■□□□□ 0.21
SNRNP48-203ENST00000634363 APOBEC3GQ9HC16 384 aaKnown RBP16.38■□□□□ 0.21
SNRNP48-203ENST00000634363 KRT82Q9NSB4 513 aa16.38■□□□□ 0.21
SNRNP48-203ENST00000634363 DNAJC17Q9NVM6 304 aaKnown RBP16.38■□□□□ 0.21
SNRNP48-203ENST00000634363 PLXND1Q9Y4D7 1925 aa16.37■□□□□ 0.21
SNRNP48-203ENST00000634363 NEDD8-MDP1E9PL57 170 aa16.37■□□□□ 0.21
SNRNP48-203ENST00000634363 PMM2O15305 246 aa16.37■□□□□ 0.21
SNRNP48-203ENST00000634363 HOXC11O43248 304 aaPredicted RBP16.37■□□□□ 0.21
SNRNP48-203ENST00000634363 HYAL3O43820 417 aaPredicted RBP16.37■□□□□ 0.21
SNRNP48-203ENST00000634363 BEST1O76090 585 aa16.37■□□□□ 0.21
SNRNP48-203ENST00000634363 LETM1O95202 739 aaPredicted RBP16.37■□□□□ 0.21
SNRNP48-203ENST00000634363 TBX18O95935 607 aa16.37■□□□□ 0.21
SNRNP48-203ENST00000634363 CCDC130P13994 396 aa16.37■□□□□ 0.21
SNRNP48-203ENST00000634363 NTSR1P30989 418 aa16.37■□□□□ 0.21
SNRNP48-203ENST00000634363 DPP6P42658 865 aa16.37■□□□□ 0.21
SNRNP48-203ENST00000634363 PGFP49763 221 aa16.37■□□□□ 0.21
SNRNP48-203ENST00000634363 MAP3K7CLP57077 242 aa16.37■□□□□ 0.21
SNRNP48-203ENST00000634363 SIM1P81133 766 aaPredicted RBP16.37■□□□□ 0.21
SNRNP48-203ENST00000634363 DUOXA1Q1HG43 343 aa16.37■□□□□ 0.21
SNRNP48-203ENST00000634363 SKOR2Q2VWA4 1001 aaPredicted RBP16.37■□□□□ 0.21
SNRNP48-203ENST00000634363 SNX30Q5VWJ9 437 aa16.37■□□□□ 0.21
SNRNP48-203ENST00000634363 SLC36A4Q6YBV0 504 aa16.37■□□□□ 0.21
SNRNP48-203ENST00000634363 C11orf57Q6ZUT1 292 aaPredicted RBP16.37■□□□□ 0.21
SNRNP48-203ENST00000634363 CHPFQ8IZ52 775 aa16.37■□□□□ 0.21
SNRNP48-203ENST00000634363 FUKQ8N0W3 1084 aa16.37■□□□□ 0.21
SNRNP48-203ENST00000634363 KDF1Q8NAX2 398 aaPredicted RBP16.37■□□□□ 0.21
SNRNP48-203ENST00000634363 ENOX1Q8TC92 643 aaKnown RBP16.37■□□□□ 0.21
SNRNP48-203ENST00000634363 KCNV2Q8TDN2 545 aa16.37■□□□□ 0.21
SNRNP48-203ENST00000634363 FAXDC2Q96IV6 333 aa16.37■□□□□ 0.21
SNRNP48-203ENST00000634363 ACOX2Q99424 681 aa16.37■□□□□ 0.21
SNRNP48-203ENST00000634363 BBS2Q9BXC9 721 aa16.37■□□□□ 0.21
SNRNP48-203ENST00000634363 NAT10Q9H0A0 1025 aaKnown RBP16.37■□□□□ 0.21
SNRNP48-203ENST00000634363 SDCBP2Q9H190 292 aa16.37■□□□□ 0.21
SNRNP48-203ENST00000634363 IL37Q9NZH6 218 aa16.37■□□□□ 0.21
SNRNP48-203ENST00000634363 CALCOCO1Q9P1Z2 691 aa16.37■□□□□ 0.21
SNRNP48-203ENST00000634363 SLC6A14Q9UN76 642 aa16.37■□□□□ 0.21
SNRNP48-203ENST00000634363 NFE2L3Q9Y4A8 694 aa16.37■□□□□ 0.21
SNRNP48-203ENST00000634363 PCNX2A6NKB5 2137 aa16.36■□□□□ 0.21
SNRNP48-203ENST00000634363 TLR5O60602 858 aa16.36■□□□□ 0.21
SNRNP48-203ENST00000634363 CD58P19256 250 aa16.36■□□□□ 0.21
SNRNP48-203ENST00000634363 TUBP50607 506 aa16.36■□□□□ 0.21
SNRNP48-203ENST00000634363 ZNF33AQ06730 810 aa16.36■□□□□ 0.21
SNRNP48-203ENST00000634363 HSP90AA4PQ58FG1 418 aa16.36■□□□□ 0.21
SNRNP48-203ENST00000634363 EGFLAMQ63HQ2 1017 aa16.36■□□□□ 0.21
SNRNP48-203ENST00000634363 GRAMD4Q6IC98 578 aa16.36■□□□□ 0.21
SNRNP48-203ENST00000634363 UNC93AQ86WB7 457 aa16.36■□□□□ 0.21
SNRNP48-203ENST00000634363 MIB1Q86YT6 1006 aa16.36■□□□□ 0.21
SNRNP48-203ENST00000634363 TTC39CQ8N584 583 aa16.36■□□□□ 0.21
SNRNP48-203ENST00000634363 OR2I1PQ8NGU4 316 aa16.36■□□□□ 0.21
SNRNP48-203ENST00000634363 CEP76Q8TAP6 659 aa16.36■□□□□ 0.21
SNRNP48-203ENST00000634363 SLC2A14Q8TDB8 520 aa16.36■□□□□ 0.21
SNRNP48-203ENST00000634363 JAKMIP2Q96AA8 810 aa16.36■□□□□ 0.21
SNRNP48-203ENST00000634363 NT5C1BQ96P26 610 aa16.36■□□□□ 0.21
SNRNP48-203ENST00000634363 XPO6Q96QU8 1125 aaKnown RBP16.36■□□□□ 0.21
SNRNP48-203ENST00000634363 SMOQ99835 787 aa16.36■□□□□ 0.21
SNRNP48-203ENST00000634363 TLR8Q9NR97 1041 aaKnown RBP16.36■□□□□ 0.21
SNRNP48-203ENST00000634363 FAM49BQ9NUQ9 324 aa16.36■□□□□ 0.21
SNRNP48-203ENST00000634363 COMMD8Q9NX08 183 aa16.36■□□□□ 0.21
SNRNP48-203ENST00000634363 HCN2Q9UL51 889 aa16.36■□□□□ 0.21
SNRNP48-203ENST00000634363 CYP8B1Q9UNU6 501 aa16.36■□□□□ 0.21
SNRNP48-203ENST00000634363 ZFHX4Q86UP3 3567 aa16.35■□□□□ 0.21
SNRNP48-203ENST00000634363 KCNJ18B7U540 433 aa16.35■□□□□ 0.21
SNRNP48-203ENST00000634363 OPHN1O60890 802 aa16.35■□□□□ 0.21
SNRNP48-203ENST00000634363 SERPINF2P08697 491 aa16.35■□□□□ 0.21
SNRNP48-203ENST00000634363 PRKCSHP14314 528 aaPredicted RBP16.35■□□□□ 0.21
SNRNP48-203ENST00000634363 TYRP14679 529 aa16.35■□□□□ 0.21
SNRNP48-203ENST00000634363 ADORA2BP29275 332 aa16.35■□□□□ 0.21
SNRNP48-203ENST00000634363 ATP5C1P36542 298 aaKnown RBP16.35■□□□□ 0.21
SNRNP48-203ENST00000634363 NDST1P52848 882 aa16.35■□□□□ 0.21
SNRNP48-203ENST00000634363 MYL5Q02045 173 aa16.35■□□□□ 0.21
SNRNP48-203ENST00000634363 INCA1Q0VD86 236 aa16.35■□□□□ 0.21
SNRNP48-203ENST00000634363 LRMPQ12912 555 aa16.35■□□□□ 0.21
SNRNP48-203ENST00000634363 SEMA3BQ13214 749 aa16.35■□□□□ 0.21
SNRNP48-203ENST00000634363 KCNJ12Q14500 433 aa16.35■□□□□ 0.21
SNRNP48-203ENST00000634363 MAN2A1Q16706 1144 aa16.35■□□□□ 0.21
SNRNP48-203ENST00000634363 HTR3DQ70Z44 454 aa16.35■□□□□ 0.21
SNRNP48-203ENST00000634363 IRF2BP1Q8IU81 584 aa16.35■□□□□ 0.21
SNRNP48-203ENST00000634363 RGL4Q8IZJ4 473 aa16.35■□□□□ 0.21
SNRNP48-203ENST00000634363 C12orf29Q8N999 325 aa16.35■□□□□ 0.21
SNRNP48-203ENST00000634363 ZMIZ2Q8NF64 920 aa16.35■□□□□ 0.21
SNRNP48-203ENST00000634363 GATA6Q92908 595 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms