RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 NKRFO15226 690 aaKnown RBP eCLIP12.07□□□□□ -0.48
SHPRH-211ENST00000629427 CYP2A7P20853 494 aa12.07□□□□□ -0.48
SHPRH-211ENST00000629427 CYP2F1P24903 491 aa12.07□□□□□ -0.48
SHPRH-211ENST00000629427 CLYBLQ8N0X4 340 aa12.07□□□□□ -0.48
SHPRH-211ENST00000629427 TRPC4APQ8TEL6 797 aa12.07□□□□□ -0.48
SHPRH-211ENST00000629427 ACTR8Q9H981 624 aa12.07□□□□□ -0.48
SHPRH-211ENST00000629427 HEY2Q9UBP5 337 aa12.07□□□□□ -0.48
SHPRH-211ENST00000629427 TBX4P57082 545 aa12.07□□□□□ -0.48
SHPRH-211ENST00000629427 BST2Q10589 180 aaKnown RBP12.07□□□□□ -0.48
SHPRH-211ENST00000629427 NFE2Q16621 373 aaPredicted RBP12.07□□□□□ -0.48
SHPRH-211ENST00000629427 PHF21BQ96EK2 531 aa12.07□□□□□ -0.48
SHPRH-211ENST00000629427 CNPY3Q9BT09 278 aa12.07□□□□□ -0.48
SHPRH-211ENST00000629427 EFCAB1Q9HAE3 211 aa12.07□□□□□ -0.48
SHPRH-211ENST00000629427 PCDHB5Q9Y5E4 795 aa12.07□□□□□ -0.48
SHPRH-211ENST00000629427 PDZK1P1A8MUH7 402 aa12.07□□□□□ -0.48
SHPRH-211ENST00000629427 SREBF1P36956 1147 aa12.07□□□□□ -0.48
SHPRH-211ENST00000629427 NR6A1Q15406 480 aa12.07□□□□□ -0.48
SHPRH-211ENST00000629427 PPM1LQ5SGD2 360 aa12.07□□□□□ -0.48
SHPRH-211ENST00000629427 DEFB132Q7Z7B7 95 aa12.07□□□□□ -0.48
SHPRH-211ENST00000629427 TXNRD3Q86VQ6 643 aa12.07□□□□□ -0.48
SHPRH-211ENST00000629427 CDK20Q8IZL9 346 aa12.07□□□□□ -0.48
SHPRH-211ENST00000629427 ITGA11Q9UKX5 1188 aa12.07□□□□□ -0.48
SHPRH-211ENST00000629427 PARNO95453 639 aaKnown RBP12.07□□□□□ -0.48
SHPRH-211ENST00000629427 HSMCR30P0CW71 290 aa12.07□□□□□ -0.48
SHPRH-211ENST00000629427 SERPINB1P30740 379 aa12.07□□□□□ -0.48
SHPRH-211ENST00000629427 GLMNQ92990 594 aa12.07□□□□□ -0.48
SHPRH-211ENST00000629427 RAD54BQ9Y620 910 aa12.07□□□□□ -0.48
SHPRH-211ENST00000629427 GOLGA4Q13439 2230 aaKnown RBP12.06□□□□□ -0.48
SHPRH-211ENST00000629427 ANTXR2P58335 489 aa12.06□□□□□ -0.48
SHPRH-211ENST00000629427 CCZ1BP86790 482 aa12.06□□□□□ -0.48
SHPRH-211ENST00000629427 CCZ1P86791 482 aaPredicted RBP12.06□□□□□ -0.48
SHPRH-211ENST00000629427 ILDR2Q71H61 639 aa12.06□□□□□ -0.48
SHPRH-211ENST00000629427 RGL4Q8IZJ4 473 aa12.06□□□□□ -0.48
SHPRH-211ENST00000629427 TPD52L3Q96J77 140 aa12.06□□□□□ -0.48
SHPRH-211ENST00000629427 SH3GL1Q99961 368 aa12.06□□□□□ -0.48
SHPRH-211ENST00000629427 UNKQ9C0B0 810 aaKnown RBP12.06□□□□□ -0.48
SHPRH-211ENST00000629427 PHTF1Q9UMS5 762 aa12.06□□□□□ -0.48
SHPRH-211ENST00000629427 C1orf167Q5SNV9 1468 aa12.06□□□□□ -0.48
SHPRH-211ENST00000629427 NEXMIFQ5QGS0 1516 aa12.06□□□□□ -0.48
SHPRH-211ENST00000629427 THRAP10827 490 aa12.06□□□□□ -0.48
SHPRH-211ENST00000629427 GHRP10912 638 aa12.06□□□□□ -0.48
SHPRH-211ENST00000629427 HSD17B3P37058 310 aa12.06□□□□□ -0.48
SHPRH-211ENST00000629427 NUP62P37198 522 aaPredicted RBP12.06□□□□□ -0.48
SHPRH-211ENST00000629427 TRAF2Q12933 501 aa12.06□□□□□ -0.48
SHPRH-211ENST00000629427 EXD1Q8NHP7 514 aa12.06□□□□□ -0.48
SHPRH-211ENST00000629427 PHACTR1Q9C0D0 580 aa12.06□□□□□ -0.48
SHPRH-211ENST00000629427 ARHGEF3Q9NR81 526 aa12.06□□□□□ -0.48
SHPRH-211ENST00000629427 SPG21Q9NZD8 308 aa12.06□□□□□ -0.48
SHPRH-211ENST00000629427 PXDNLA1KZ92 1463 aa12.06□□□□□ -0.48
SHPRH-211ENST00000629427 PPP4CP60510 307 aa12.06□□□□□ -0.48
SHPRH-211ENST00000629427 TGFB2P61812 414 aa12.06□□□□□ -0.48
SHPRH-211ENST00000629427 MAPK7Q13164 816 aa12.06□□□□□ -0.48
SHPRH-211ENST00000629427 GRB10Q13322 594 aa12.06□□□□□ -0.48
SHPRH-211ENST00000629427 COL23A1Q86Y22 540 aaPredicted RBP12.06□□□□□ -0.48
SHPRH-211ENST00000629427 CCNJLQ8IV13 435 aa12.06□□□□□ -0.48
SHPRH-211ENST00000629427 CELF6Q96J87 481 aaKnown RBP12.06□□□□□ -0.48
SHPRH-211ENST00000629427 ZSWIM1Q9BR11 485 aa12.06□□□□□ -0.48
SHPRH-211ENST00000629427 AHSPQ9NZD4 102 aa12.06□□□□□ -0.48
SHPRH-211ENST00000629427 IGF2BP3O00425 579 aaKnown RBP eCLIP12.06□□□□□ -0.48
SHPRH-211ENST00000629427 SOX10P56693 466 aa12.06□□□□□ -0.48
SHPRH-211ENST00000629427 CYP24A1Q07973 514 aa12.06□□□□□ -0.48
SHPRH-211ENST00000629427 ITGA9Q13797 1035 aa12.06□□□□□ -0.48
SHPRH-211ENST00000629427 MARC1Q5VT66 337 aa12.06□□□□□ -0.48
SHPRH-211ENST00000629427 HLA-DQA1Q5Y7H0 255 aa12.06□□□□□ -0.48
SHPRH-211ENST00000629427 DOK6Q6PKX4 331 aa12.06□□□□□ -0.48
SHPRH-211ENST00000629427 CYP20A1Q6UW02 462 aa12.06□□□□□ -0.48
SHPRH-211ENST00000629427 GLT6D1Q7Z4J2 308 aa12.06□□□□□ -0.48
SHPRH-211ENST00000629427 ATG16L2Q8NAA4 619 aa12.06□□□□□ -0.48
SHPRH-211ENST00000629427 C3orf20Q8ND61 904 aa12.06□□□□□ -0.48
SHPRH-211ENST00000629427 LPCAT1Q8NF37 534 aa12.06□□□□□ -0.48
SHPRH-211ENST00000629427 DNERQ8NFT8 737 aa12.06□□□□□ -0.48
SHPRH-211ENST00000629427 ADI1Q9BV57 179 aa12.06□□□□□ -0.48
SHPRH-211ENST00000629427 TRIM8Q9BZR9 551 aa12.06□□□□□ -0.48
SHPRH-211ENST00000629427 PDGFDQ9GZP0 370 aaPredicted RBP12.06□□□□□ -0.48
SHPRH-211ENST00000629427 WHRNQ9P202 907 aa12.06□□□□□ -0.48
SHPRH-211ENST00000629427 GTF3C4Q9UKN8 822 aa12.06□□□□□ -0.48
SHPRH-211ENST00000629427 MADDQ8WXG6 1647 aa12.06□□□□□ -0.48
SHPRH-211ENST00000629427 TECPR2O15040 1411 aa12.06□□□□□ -0.48
SHPRH-211ENST00000629427 CCT8L1PA6NM43 557 aa12.06□□□□□ -0.48
SHPRH-211ENST00000629427 O00370 1275 aa12.06□□□□□ -0.48
SHPRH-211ENST00000629427 CTSEP14091 401 aa12.06□□□□□ -0.48
SHPRH-211ENST00000629427 SLC2A4P14672 509 aa12.06□□□□□ -0.48
SHPRH-211ENST00000629427 CCT8P50990 548 aa12.06□□□□□ -0.48
SHPRH-211ENST00000629427 BOP1Q14137 746 aaKnown RBP12.06□□□□□ -0.48
SHPRH-211ENST00000629427 EPS8L3Q8TE67 593 aaKnown RBP12.06□□□□□ -0.48
SHPRH-211ENST00000629427 DNAJC9Q8WXX5 260 aa12.06□□□□□ -0.48
SHPRH-211ENST00000629427 SENP6Q9GZR1 1112 aaPredicted RBP12.06□□□□□ -0.48
SHPRH-211ENST00000629427 KCNF1Q9H3M0 494 aa12.06□□□□□ -0.48
SHPRH-211ENST00000629427 MRPL42Q9Y6G3 142 aaKnown RBP12.06□□□□□ -0.48
SHPRH-211ENST00000629427 RIMS1Q86UR5 1692 aaKnown RBP12.06□□□□□ -0.48
SHPRH-211ENST00000629427 IFNA14P01570 189 aa12.06□□□□□ -0.48
SHPRH-211ENST00000629427 PKN2Q16513 984 aaKnown RBP12.06□□□□□ -0.48
SHPRH-211ENST00000629427 ATAD3BQ5T9A4 648 aa12.06□□□□□ -0.48
SHPRH-211ENST00000629427 EMC1Q8N766 993 aa12.06□□□□□ -0.48
SHPRH-211ENST00000629427 TMEM159Q96B96 161 aa12.06□□□□□ -0.48
SHPRH-211ENST00000629427 C1QTNF7Q9BXJ2 289 aa12.06□□□□□ -0.48
SHPRH-211ENST00000629427 RAMP2O60895 175 aa12.05□□□□□ -0.48
SHPRH-211ENST00000629427 MICAL2O94851 1124 aa12.05□□□□□ -0.48
SHPRH-211ENST00000629427 RENBPP51606 427 aa12.05□□□□□ -0.48
SHPRH-211ENST00000629427 MPP3Q13368 585 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms