RNA–Protein interactions for RNA: ENST00000629036.2

DDX41-219, Transcript of DEAD-box helicase 41, humanhuman

TSL 4 BASIC

Gene DDX41, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-219ENST00000629036 PTPN20Q4JDL3 420 aa11.63□□□□□ -0.55
DDX41-219ENST00000629036 CC2D1AQ6P1N0 951 aaPredicted RBP11.63□□□□□ -0.55
DDX41-219ENST00000629036 C1orf228Q6PIY5 440 aa11.63□□□□□ -0.55
DDX41-219ENST00000629036 MAMSTRQ6ZN01 415 aa11.63□□□□□ -0.55
DDX41-219ENST00000629036 LUZP1Q86V48 1076 aa11.63□□□□□ -0.55
DDX41-219ENST00000629036 PASD1Q8IV76 773 aa11.63□□□□□ -0.55
DDX41-219ENST00000629036 ARHGAP18Q8N392 663 aa11.63□□□□□ -0.55
DDX41-219ENST00000629036 CPA6Q8N4T0 437 aa11.63□□□□□ -0.55
DDX41-219ENST00000629036 C1orf131Q8NDD1 294 aaKnown RBP11.63□□□□□ -0.55
DDX41-219ENST00000629036 BAP1Q92560 729 aa11.63□□□□□ -0.55
DDX41-219ENST00000629036 EDEM1Q92611 657 aa11.63□□□□□ -0.55
DDX41-219ENST00000629036 NELL1Q92832 810 aa11.63□□□□□ -0.55
DDX41-219ENST00000629036 NAP1L5Q96NT1 182 aaPredicted RBP11.63□□□□□ -0.55
DDX41-219ENST00000629036 NELL2Q99435 816 aa11.63□□□□□ -0.55
DDX41-219ENST00000629036 SYT11Q9BT88 431 aa11.63□□□□□ -0.55
DDX41-219ENST00000629036 TTYH3Q9C0H2 523 aa11.63□□□□□ -0.55
DDX41-219ENST00000629036 TNRC6BQ9UPQ9 1833 aaKnown RBP11.63□□□□□ -0.55
DDX41-219ENST00000629036 PES1O00541 588 aaKnown RBP11.62□□□□□ -0.55
DDX41-219ENST00000629036 MSI1O43347 362 aaKnown RBP11.62□□□□□ -0.55
DDX41-219ENST00000629036 MED7O43513 233 aa11.62□□□□□ -0.55
DDX41-219ENST00000629036 FBXO21O94952 628 aa11.62□□□□□ -0.55
DDX41-219ENST00000629036 NFATC1O95644 943 aa11.62□□□□□ -0.55
DDX41-219ENST00000629036 EGFP01133 1207 aa11.62□□□□□ -0.55
DDX41-219ENST00000629036 LTFP02788 710 aa11.62□□□□□ -0.55
DDX41-219ENST00000629036 ERBB2P04626 1255 aa11.62□□□□□ -0.55
DDX41-219ENST00000629036 PBX1P40424 430 aa11.62□□□□□ -0.55
DDX41-219ENST00000629036 USP8P40818 1118 aa11.62□□□□□ -0.55
DDX41-219ENST00000629036 MAGEA9P43362 315 aa11.62□□□□□ -0.55
DDX41-219ENST00000629036 POLR2FP61218 127 aaKnown RBP11.62□□□□□ -0.55
DDX41-219ENST00000629036 PITX1P78337 314 aaPredicted RBP11.62□□□□□ -0.55
DDX41-219ENST00000629036 EFEMP1Q12805 493 aa11.62□□□□□ -0.55
DDX41-219ENST00000629036 MTAPQ13126 283 aa11.62□□□□□ -0.55
DDX41-219ENST00000629036 TAF5Q15542 800 aa11.62□□□□□ -0.55
DDX41-219ENST00000629036 LY6G5CQ5SRR4 150 aa11.62□□□□□ -0.55
DDX41-219ENST00000629036 OTUD1Q5VV17 481 aaPredicted RBP11.62□□□□□ -0.55
DDX41-219ENST00000629036 E4F1Q66K89 784 aaPredicted RBP11.62□□□□□ -0.55
DDX41-219ENST00000629036 RNF43Q68DV7 783 aa11.62□□□□□ -0.55
DDX41-219ENST00000629036 OLFML1Q6UWY5 402 aa11.62□□□□□ -0.55
DDX41-219ENST00000629036 BEND5Q7L4P6 421 aa11.62□□□□□ -0.55
DDX41-219ENST00000629036 TMEM25Q86YD3 366 aa11.62□□□□□ -0.55
DDX41-219ENST00000629036 MIB1Q86YT6 1006 aa11.62□□□□□ -0.55
DDX41-219ENST00000629036 SCUBE3Q8IX30 993 aa11.62□□□□□ -0.55
DDX41-219ENST00000629036 SIX6OS1Q8N1H7 587 aa11.62□□□□□ -0.55
DDX41-219ENST00000629036 SLC20A1Q8WUM9 679 aa11.62□□□□□ -0.55
DDX41-219ENST00000629036 RUBCNQ92622 972 aa11.62□□□□□ -0.55
DDX41-219ENST00000629036 OTUB2Q96DC9 234 aa11.62□□□□□ -0.55
DDX41-219ENST00000629036 CDK5RAP1Q96SZ6 601 aaKnown RBP11.62□□□□□ -0.55
DDX41-219ENST00000629036 ADAM33Q9BZ11 813 aa11.62□□□□□ -0.55
DDX41-219ENST00000629036 NAT10Q9H0A0 1025 aaKnown RBP11.62□□□□□ -0.55
DDX41-219ENST00000629036 SEMA4AQ9H3S1 761 aa11.62□□□□□ -0.55
DDX41-219ENST00000629036 MARK1Q9P0L2 795 aa11.62□□□□□ -0.55
DDX41-219ENST00000629036 MARCH2Q9P0N8 246 aa11.62□□□□□ -0.55
DDX41-219ENST00000629036 RASAL2Q9UJF2 1139 aa11.62□□□□□ -0.55
DDX41-219ENST00000629036 HCN2Q9UL51 889 aa11.62□□□□□ -0.55
DDX41-219ENST00000629036 DAAM1Q9Y4D1 1078 aa11.62□□□□□ -0.55
DDX41-219ENST00000629036 ATRXP46100 2492 aa11.61□□□□□ -0.55
DDX41-219ENST00000629036 SLC9A3R1O14745 358 aaPredicted RBP11.61□□□□□ -0.55
DDX41-219ENST00000629036 MMEP08473 750 aa11.61□□□□□ -0.55
DDX41-219ENST00000629036 RALAP11233 206 aa11.61□□□□□ -0.55
DDX41-219ENST00000629036 SOX5P35711 763 aa11.61□□□□□ -0.55
DDX41-219ENST00000629036 GALK1P51570 392 aa11.61□□□□□ -0.55
DDX41-219ENST00000629036 NOMO3P69849 1222 aa11.61□□□□□ -0.55
DDX41-219ENST00000629036 FMO1Q01740 532 aa11.61□□□□□ -0.55
DDX41-219ENST00000629036 UBXN1Q04323 297 aa11.61□□□□□ -0.55
DDX41-219ENST00000629036 PTK2Q05397 1052 aa11.61□□□□□ -0.55
DDX41-219ENST00000629036 NFKBIBQ15653 356 aa11.61□□□□□ -0.55
DDX41-219ENST00000629036 FKBP15Q5T1M5 1219 aa11.61□□□□□ -0.55
DDX41-219ENST00000629036 SYPL2Q5VXT5 272 aa11.61□□□□□ -0.55
DDX41-219ENST00000629036 FMNL3Q8IVF7 1028 aa11.61□□□□□ -0.55
DDX41-219ENST00000629036 C1orf210Q8IVY1 113 aa11.61□□□□□ -0.55
DDX41-219ENST00000629036 TTC16Q8NEE8 873 aa11.61□□□□□ -0.55
DDX41-219ENST00000629036 DQX1Q8TE96 717 aaKnown RBP11.61□□□□□ -0.55
DDX41-219ENST00000629036 SLC39A13Q96H72 371 aa11.61□□□□□ -0.55
DDX41-219ENST00000629036 SLC2A13Q96QE2 648 aa11.61□□□□□ -0.55
DDX41-219ENST00000629036 MIS12Q9H081 205 aa11.61□□□□□ -0.55
DDX41-219ENST00000629036 LMAN1LQ9HAT1 526 aa11.61□□□□□ -0.55
DDX41-219ENST00000629036 NLRC4Q9NPP4 1024 aa11.61□□□□□ -0.55
DDX41-219ENST00000629036 SPHK2Q9NRA0 654 aa11.61□□□□□ -0.55
DDX41-219ENST00000629036 ABCC13Q9NSE7 274 aa11.61□□□□□ -0.55
DDX41-219ENST00000629036 TBC1D14Q9P2M4 693 aa11.61□□□□□ -0.55
DDX41-219ENST00000629036 SFMBT1Q9UHJ3 866 aa11.61□□□□□ -0.55
DDX41-219ENST00000629036 STOML2Q9UJZ1 356 aa11.61□□□□□ -0.55
DDX41-219ENST00000629036 AGO1Q9UL18 857 aaKnown RBP11.61□□□□□ -0.55
DDX41-219ENST00000629036 MRPS17Q9Y2R5 130 aaKnown RBP11.61□□□□□ -0.55
DDX41-219ENST00000629036 HBS1LQ9Y450 684 aaKnown RBP11.61□□□□□ -0.55
DDX41-219ENST00000629036 CEP192Q8TEP8 1941 aa11.6□□□□□ -0.55
DDX41-219ENST00000629036 RALGAPA1Q6GYQ0 2036 aa11.6□□□□□ -0.55
DDX41-219ENST00000629036 A0A0A0MRY4 1105 aa11.6□□□□□ -0.55
DDX41-219ENST00000629036 SMTNL1A8MU46 457 aa11.6□□□□□ -0.55
DDX41-219ENST00000629036 K7EQS6 105 aa11.6□□□□□ -0.55
DDX41-219ENST00000629036 K7ESF4 209 aa11.6□□□□□ -0.55
DDX41-219ENST00000629036 TRIM24O15164 1050 aa11.6□□□□□ -0.55
DDX41-219ENST00000629036 CACNG3O60359 315 aa11.6□□□□□ -0.55
DDX41-219ENST00000629036 GFPT2O94808 682 aa11.6□□□□□ -0.55
DDX41-219ENST00000629036 PAPSS2O95340 614 aaPredicted RBP11.6□□□□□ -0.55
DDX41-219ENST00000629036 PENKP01210 267 aaPredicted RBP11.6□□□□□ -0.55
DDX41-219ENST00000629036 CYP1A1P04798 512 aaPredicted RBP11.6□□□□□ -0.55
DDX41-219ENST00000629036 ADH5P11766 374 aa11.6□□□□□ -0.55
DDX41-219ENST00000629036 CORO1AP31146 461 aaKnown RBP11.6□□□□□ -0.55
DDX41-219ENST00000629036 EIF2DP41214 584 aaKnown RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms