RNA–Protein interactions for RNA: ENST00000628734.1

UBE2A-208, Transcript of ubiquitin conjugating enzyme E2 A, human

TSL 2

Gene UBE2A, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2A-208	ENST00000628734	HDAC4	P56524	1084 aa		4.1	□□□□□ -1.75
UBE2A-208	ENST00000628734	POLR2F	P61218	127 aa	Known RBP	4.1	□□□□□ -1.75
UBE2A-208	ENST00000628734	ROR1	Q01973	937 aa		4.1	□□□□□ -1.75
UBE2A-208	ENST00000628734	ITK	Q08881	620 aa		4.1	□□□□□ -1.75
UBE2A-208	ENST00000628734	DDX10	Q13206	875 aa	Known RBP	4.1	□□□□□ -1.75
UBE2A-208	ENST00000628734	NOG	Q13253	232 aa		4.1	□□□□□ -1.75
UBE2A-208	ENST00000628734	FHL1	Q13642	323 aa		4.1	□□□□□ -1.75
UBE2A-208	ENST00000628734	TBCC	Q15814	346 aa		4.1	□□□□□ -1.75
UBE2A-208	ENST00000628734	NFE2	Q16621	373 aa	Predicted RBP	4.1	□□□□□ -1.75
UBE2A-208	ENST00000628734	MTX3	Q5HYI7	312 aa		4.1	□□□□□ -1.75
UBE2A-208	ENST00000628734	MORN5	Q5VZ52	161 aa		4.1	□□□□□ -1.75
UBE2A-208	ENST00000628734	ANO1	Q5XXA6	986 aa		4.1	□□□□□ -1.75
UBE2A-208	ENST00000628734	ZNF626	Q68DY1	528 aa		4.1	□□□□□ -1.75
UBE2A-208	ENST00000628734	PLBD1	Q6P4A8	553 aa		4.1	□□□□□ -1.75
UBE2A-208	ENST00000628734	SASS6	Q6UVJ0	657 aa		4.1	□□□□□ -1.75
UBE2A-208	ENST00000628734	SEPT14	Q6ZU15	432 aa		4.1	□□□□□ -1.75
UBE2A-208	ENST00000628734	CATSPER4	Q7RTX7	472 aa		4.1	□□□□□ -1.75
UBE2A-208	ENST00000628734	DTX2	Q86UW9	622 aa		4.1	□□□□□ -1.75
UBE2A-208	ENST00000628734	ERC1	Q8IUD2	1116 aa		4.1	□□□□□ -1.75
UBE2A-208	ENST00000628734	CPXCR1	Q8N123	301 aa		4.1	□□□□□ -1.75
UBE2A-208	ENST00000628734	ANKRD42	Q8N9B4	389 aa		4.1	□□□□□ -1.75
UBE2A-208	ENST00000628734	ATP11C	Q8NB49	1132 aa		4.1	□□□□□ -1.75
UBE2A-208	ENST00000628734	BRSK1	Q8TDC3	778 aa		4.1	□□□□□ -1.75
UBE2A-208	ENST00000628734	TEKT4	Q8WW24	435 aa		4.1	□□□□□ -1.75
UBE2A-208	ENST00000628734	JPH3	Q8WXH2	748 aa	Predicted RBP	4.1	□□□□□ -1.75
UBE2A-208	ENST00000628734	DDX17	Q92841	729 aa	Known RBP	4.1	□□□□□ -1.75
UBE2A-208	ENST00000628734	ARHGEF2	Q92974	986 aa	Known RBP	4.1	□□□□□ -1.75
UBE2A-208	ENST00000628734	JAKMIP2	Q96AA8	810 aa		4.1	□□□□□ -1.75
UBE2A-208	ENST00000628734	MTMR8	Q96EF0	704 aa		4.1	□□□□□ -1.75
UBE2A-208	ENST00000628734	RBM17	Q96I25	401 aa	Known RBP	4.1	□□□□□ -1.75
UBE2A-208	ENST00000628734	C1orf43	Q9BWL3	253 aa		4.1	□□□□□ -1.75
UBE2A-208	ENST00000628734	AP1M1	Q9BXS5	423 aa		4.1	□□□□□ -1.75
UBE2A-208	ENST00000628734	ZNF700	Q9H0M5	742 aa		4.1	□□□□□ -1.75
UBE2A-208	ENST00000628734	CCDC8	Q9H0W5	538 aa	Predicted RBP	4.1	□□□□□ -1.75
UBE2A-208	ENST00000628734	TNMD	Q9H2S6	317 aa		4.1	□□□□□ -1.75
UBE2A-208	ENST00000628734	DBNDD1	Q9H9R9	158 aa		4.1	□□□□□ -1.75
UBE2A-208	ENST00000628734	ARHGEF3	Q9NR81	526 aa		4.1	□□□□□ -1.75
UBE2A-208	ENST00000628734	HOMER2	Q9NSB8	354 aa		4.1	□□□□□ -1.75
UBE2A-208	ENST00000628734	PIH1D1	Q9NWS0	290 aa	Known RBP	4.1	□□□□□ -1.75
UBE2A-208	ENST00000628734	ZNF580	Q9UK33	172 aa		4.1	□□□□□ -1.75
UBE2A-208	ENST00000628734	GTF2A1L	Q9UNN4	478 aa		4.1	□□□□□ -1.75
UBE2A-208	ENST00000628734	SH2B3	Q9UQQ2	575 aa		4.1	□□□□□ -1.75
UBE2A-208	ENST00000628734	LUC7L2	Q9Y383	392 aa	Known RBP	4.1	□□□□□ -1.75
UBE2A-208	ENST00000628734	DAAM1	Q9Y4D1	1078 aa		4.1	□□□□□ -1.75
UBE2A-208	ENST00000628734	EVC2	Q86UK5	1308 aa		4.1	□□□□□ -1.75
UBE2A-208	ENST00000628734	FAM170A	A1A519	330 aa		4.09	□□□□□ -1.75
UBE2A-208	ENST00000628734	TRIM64	A6NGJ6	449 aa		4.09	□□□□□ -1.75
UBE2A-208	ENST00000628734	TRIM64B	A6NI03	449 aa		4.09	□□□□□ -1.75
UBE2A-208	ENST00000628734	TISP43	B9A030	160 aa		4.09	□□□□□ -1.75
UBE2A-208	ENST00000628734	AKR1B15	C9JRZ8	316 aa	Predicted RBP	4.09	□□□□□ -1.75
UBE2A-208	ENST00000628734		H0YIZ8	118 aa		4.09	□□□□□ -1.75
UBE2A-208	ENST00000628734		M0QX08	132 aa		4.09	□□□□□ -1.75
UBE2A-208	ENST00000628734	MYO1F	O00160	1098 aa		4.09	□□□□□ -1.75
UBE2A-208	ENST00000628734	PIP5K1C	O60331	668 aa		4.09	□□□□□ -1.75
UBE2A-208	ENST00000628734	KLHL41	O60662	606 aa		4.09	□□□□□ -1.75
UBE2A-208	ENST00000628734	NEBL	O76041	1014 aa		4.09	□□□□□ -1.75
UBE2A-208	ENST00000628734	CSPG5	O95196	566 aa		4.09	□□□□□ -1.75
UBE2A-208	ENST00000628734	BMP15	O95972	392 aa		4.09	□□□□□ -1.75
UBE2A-208	ENST00000628734	NHLRC4	P0CG21	123 aa	Predicted RBP	4.09	□□□□□ -1.75
UBE2A-208	ENST00000628734	SFTPC	P11686	197 aa		4.09	□□□□□ -1.75
UBE2A-208	ENST00000628734	XRCC6	P12956	609 aa	Known RBP eCLIP	4.09	□□□□□ -1.75
UBE2A-208	ENST00000628734	ATF3	P18847	181 aa		4.09	□□□□□ -1.75
UBE2A-208	ENST00000628734	CHRM3	P20309	590 aa		4.09	□□□□□ -1.75
UBE2A-208	ENST00000628734	CD9	P21926	228 aa		4.09	□□□□□ -1.75
UBE2A-208	ENST00000628734	KEL	P23276	732 aa		4.09	□□□□□ -1.75
UBE2A-208	ENST00000628734	HSPA1L	P34931	641 aa		4.09	□□□□□ -1.75
UBE2A-208	ENST00000628734	SKIV2L2	P42285	1042 aa	Known RBP	4.09	□□□□□ -1.75
UBE2A-208	ENST00000628734	STT3A	P46977	705 aa		4.09	□□□□□ -1.75
UBE2A-208	ENST00000628734	GCLC	P48506	637 aa	Predicted RBP	4.09	□□□□□ -1.75
UBE2A-208	ENST00000628734	PPM1F	P49593	454 aa	Predicted RBP	4.09	□□□□□ -1.75
UBE2A-208	ENST00000628734	MXI1	P50539	228 aa		4.09	□□□□□ -1.75
UBE2A-208	ENST00000628734	HK3	P52790	923 aa		4.09	□□□□□ -1.75
UBE2A-208	ENST00000628734	AP2B1	P63010	937 aa		4.09	□□□□□ -1.75
UBE2A-208	ENST00000628734	TUBA4A	P68366	448 aa		4.09	□□□□□ -1.75
UBE2A-208	ENST00000628734	RCN1	Q15293	331 aa		4.09	□□□□□ -1.75
UBE2A-208	ENST00000628734	PUM3	Q15397	648 aa	Known RBP	4.09	□□□□□ -1.75
UBE2A-208	ENST00000628734	SMUG1	Q53HV7	270 aa		4.09	□□□□□ -1.75
UBE2A-208	ENST00000628734	AARS2	Q5JTZ9	985 aa	Known RBP	4.09	□□□□□ -1.75
UBE2A-208	ENST00000628734	THEMIS2	Q5TEJ8	643 aa		4.09	□□□□□ -1.75
UBE2A-208	ENST00000628734	HIBCH	Q6NVY1	386 aa	Predicted RBP	4.09	□□□□□ -1.75
UBE2A-208	ENST00000628734	ZNF804A	Q7Z570	1209 aa		4.09	□□□□□ -1.75
UBE2A-208	ENST00000628734	WDR53	Q7Z5U6	358 aa	Predicted RBP	4.09	□□□□□ -1.75
UBE2A-208	ENST00000628734	PNMA8A	Q86V59	439 aa	Predicted RBP	4.09	□□□□□ -1.75
UBE2A-208	ENST00000628734	LRRC43	Q8N309	656 aa		4.09	□□□□□ -1.75
UBE2A-208	ENST00000628734	TNIP2	Q8NFZ5	429 aa		4.09	□□□□□ -1.75
UBE2A-208	ENST00000628734	KIAA1524	Q8TCG1	905 aa		4.09	□□□□□ -1.75
UBE2A-208	ENST00000628734	MIPOL1	Q8TD10	442 aa		4.09	□□□□□ -1.75
UBE2A-208	ENST00000628734	DNAAF4	Q8WXU2	420 aa		4.09	□□□□□ -1.75
UBE2A-208	ENST00000628734	LRRC45	Q96CN5	670 aa		4.09	□□□□□ -1.75
UBE2A-208	ENST00000628734	NAP1L3	Q99457	506 aa	Predicted RBP	4.09	□□□□□ -1.75
UBE2A-208	ENST00000628734	OSBPL10	Q9BXB5	764 aa		4.09	□□□□□ -1.75
UBE2A-208	ENST00000628734	MRPL46	Q9H2W6	279 aa	Known RBP	4.09	□□□□□ -1.75
UBE2A-208	ENST00000628734	SPATS2L	Q9NUQ6	558 aa	Known RBP	4.09	□□□□□ -1.75
UBE2A-208	ENST00000628734	STAP2	Q9UGK3	403 aa		4.09	□□□□□ -1.75
UBE2A-208	ENST00000628734	RAD54B	Q9Y620	910 aa		4.09	□□□□□ -1.75
UBE2A-208	ENST00000628734	SOS1	Q07889	1333 aa	Predicted RBP	4.09	□□□□□ -1.75
UBE2A-208	ENST00000628734	KIF2A	O00139	706 aa	Predicted RBP	4.08	□□□□□ -1.76
UBE2A-208	ENST00000628734	RTCA	O00442	366 aa	Known RBP	4.08	□□□□□ -1.76
UBE2A-208	ENST00000628734	PPM1D	O15297	605 aa		4.08	□□□□□ -1.76
UBE2A-208	ENST00000628734	NEMF	O60524	1076 aa		4.08	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms