RNA–Protein interactions for RNA: ENST00000625463.1

CHD2-204, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best)

Gene CHD2, Length 340 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-204ENST00000625463 HOXA1P49639 335 aaPredicted RBP5.33□□□□□ -1.56
CHD2-204ENST00000625463 TKTL1P51854 596 aa5.33□□□□□ -1.56
CHD2-204ENST00000625463 NEK4P51957 841 aa5.33□□□□□ -1.56
CHD2-204ENST00000625463 ARHGDIAP52565 204 aa5.33□□□□□ -1.56
CHD2-204ENST00000625463 ARFIP1P53367 373 aa5.33□□□□□ -1.56
CHD2-204ENST00000625463 ATP12AP54707 1039 aa5.33□□□□□ -1.56
CHD2-204ENST00000625463 EPHB1P54762 984 aa5.33□□□□□ -1.56
CHD2-204ENST00000625463 PSMD4P55036 377 aaKnown RBP5.33□□□□□ -1.56
CHD2-204ENST00000625463 NKX3-2P78367 333 aa5.33□□□□□ -1.56
CHD2-204ENST00000625463 AMPD2Q01433 879 aa5.33□□□□□ -1.56
CHD2-204ENST00000625463 IFITM2Q01629 132 aa5.33□□□□□ -1.56
CHD2-204ENST00000625463 IL1RL1Q01638 556 aa5.33□□□□□ -1.56
CHD2-204ENST00000625463 TARDBPQ13148 414 aaKnown RBP eCLIP5.33□□□□□ -1.56
CHD2-204ENST00000625463 HNRNPDQ14103 355 aaKnown RBP5.33□□□□□ -1.56
CHD2-204ENST00000625463 GALNT3Q14435 633 aa5.33□□□□□ -1.56
CHD2-204ENST00000625463 POU6F1Q14863 301 aa5.33□□□□□ -1.56
CHD2-204ENST00000625463 HERC3Q15034 1050 aa5.33□□□□□ -1.56
CHD2-204ENST00000625463 TRADDQ15628 312 aa5.33□□□□□ -1.56
CHD2-204ENST00000625463 CAMK4Q16566 473 aa5.33□□□□□ -1.56
CHD2-204ENST00000625463 AANATQ16613 207 aa5.33□□□□□ -1.56
CHD2-204ENST00000625463 DGKDQ16760 1214 aa5.33□□□□□ -1.56
CHD2-204ENST00000625463 ATAD3BQ5T9A4 648 aa5.33□□□□□ -1.56
CHD2-204ENST00000625463 PXDC1Q5TGL8 231 aa5.33□□□□□ -1.56
CHD2-204ENST00000625463 ALG1LQ6GMV1 187 aa5.33□□□□□ -1.56
CHD2-204ENST00000625463 FAM109BQ6ICB4 259 aaPredicted RBP5.33□□□□□ -1.56
CHD2-204ENST00000625463 STYK1Q6J9G0 422 aa5.33□□□□□ -1.56
CHD2-204ENST00000625463 PRMT9Q6P2P2 845 aa5.33□□□□□ -1.56
CHD2-204ENST00000625463 NSMFQ6X4W1 530 aa5.33□□□□□ -1.56
CHD2-204ENST00000625463 ZNF574Q6ZN55 896 aaPredicted RBP5.33□□□□□ -1.56
CHD2-204ENST00000625463 RGS9BPQ6ZS82 235 aa5.33□□□□□ -1.56
CHD2-204ENST00000625463 TMPRSS9Q7Z410 1059 aa5.33□□□□□ -1.56
CHD2-204ENST00000625463 ZNF589Q86UQ0 364 aaPredicted RBP5.33□□□□□ -1.56
CHD2-204ENST00000625463 LRRC6Q86X45 466 aa5.33□□□□□ -1.56
CHD2-204ENST00000625463 FBXO11Q86XK2 927 aa5.33□□□□□ -1.56
CHD2-204ENST00000625463 DCP1BQ8IZD4 617 aaKnown RBP5.33□□□□□ -1.56
CHD2-204ENST00000625463 IQCKQ8N0W5 287 aa5.33□□□□□ -1.56
CHD2-204ENST00000625463 AOPEPQ8N6M6 819 aa5.33□□□□□ -1.56
CHD2-204ENST00000625463 ARFGAP1Q8N6T3 406 aa5.33□□□□□ -1.56
CHD2-204ENST00000625463 ASCC1Q8N9N2 400 aaKnown RBP5.33□□□□□ -1.56
CHD2-204ENST00000625463 C12orf50Q8NA57 414 aaPredicted RBP5.33□□□□□ -1.56
CHD2-204ENST00000625463 PSD4Q8NDX1 1056 aa5.33□□□□□ -1.56
CHD2-204ENST00000625463 OR7D4Q8NG98 312 aa5.33□□□□□ -1.56
CHD2-204ENST00000625463 DEPDC1BQ8WUY9 529 aa5.33□□□□□ -1.56
CHD2-204ENST00000625463 HEXDCQ8WVB3 486 aa5.33□□□□□ -1.56
CHD2-204ENST00000625463 BSNDQ8WZ55 320 aa5.33□□□□□ -1.56
CHD2-204ENST00000625463 TANKQ92844 425 aa5.33□□□□□ -1.56
CHD2-204ENST00000625463 FOXJ1Q92949 421 aa5.33□□□□□ -1.56
CHD2-204ENST00000625463 LPPQ93052 612 aa5.33□□□□□ -1.56
CHD2-204ENST00000625463 RFKQ969G6 155 aa5.33□□□□□ -1.56
CHD2-204ENST00000625463 TRIM43Q96BQ3 446 aaPredicted RBP5.33□□□□□ -1.56
CHD2-204ENST00000625463 MTBPQ96DY7 904 aa5.33□□□□□ -1.56
CHD2-204ENST00000625463 PLEKHA8Q96JA3 519 aa5.33□□□□□ -1.56
CHD2-204ENST00000625463 MAP6Q96JE9 813 aa5.33□□□□□ -1.56
CHD2-204ENST00000625463 PHACTR3Q96KR7 559 aa5.33□□□□□ -1.56
CHD2-204ENST00000625463 AK8Q96MA6 479 aa5.33□□□□□ -1.56
CHD2-204ENST00000625463 ZNF641Q96N77 438 aaPredicted RBP5.33□□□□□ -1.56
CHD2-204ENST00000625463 PURBQ96QR8 312 aaKnown RBP5.33□□□□□ -1.56
CHD2-204ENST00000625463 WRNIP1Q96S55 665 aa5.33□□□□□ -1.56
CHD2-204ENST00000625463 ADPGKQ9BRR6 497 aa5.33□□□□□ -1.56
CHD2-204ENST00000625463 TUBB6Q9BUF5 446 aa5.33□□□□□ -1.56
CHD2-204ENST00000625463 TDRD1Q9BXT4 1180 aaKnown RBP5.33□□□□□ -1.56
CHD2-204ENST00000625463 GPR61Q9BZJ8 451 aa5.33□□□□□ -1.56
CHD2-204ENST00000625463 HOXD1Q9GZZ0 328 aa5.33□□□□□ -1.56
CHD2-204ENST00000625463 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.33□□□□□ -1.56
CHD2-204ENST00000625463 CCDC134Q9H6E4 229 aa5.33□□□□□ -1.56
CHD2-204ENST00000625463 RXFP1Q9HBX9 757 aa5.33□□□□□ -1.56
CHD2-204ENST00000625463 TM9SF3Q9HD45 589 aa5.33□□□□□ -1.56
CHD2-204ENST00000625463 RPRD1BQ9NQG5 326 aaKnown RBP5.33□□□□□ -1.56
CHD2-204ENST00000625463 EVA1BQ9NVM1 165 aa5.33□□□□□ -1.56
CHD2-204ENST00000625463 POLR3BQ9NW08 1133 aaPredicted RBP5.33□□□□□ -1.56
CHD2-204ENST00000625463 ZDHHC7Q9NXF8 308 aa5.33□□□□□ -1.56
CHD2-204ENST00000625463 SNTG2Q9NY99 539 aa5.33□□□□□ -1.56
CHD2-204ENST00000625463 HSPBP1Q9NZL4 362 aa5.33□□□□□ -1.56
CHD2-204ENST00000625463 NCKIPSDQ9NZQ3 722 aa5.33□□□□□ -1.56
CHD2-204ENST00000625463 SRP68Q9UHB9 627 aaKnown RBP5.33□□□□□ -1.56
CHD2-204ENST00000625463 SLC12A6Q9UHW9 1150 aa5.33□□□□□ -1.56
CHD2-204ENST00000625463 GGA1Q9UJY5 639 aa5.33□□□□□ -1.56
CHD2-204ENST00000625463 RPS6KA6Q9UK32 745 aa5.33□□□□□ -1.56
CHD2-204ENST00000625463 PADI4Q9UM07 663 aa5.33□□□□□ -1.56
CHD2-204ENST00000625463 CAPN11Q9UMQ6 739 aa5.33□□□□□ -1.56
CHD2-204ENST00000625463 PACSIN2Q9UNF0 486 aaPredicted RBP5.33□□□□□ -1.56
CHD2-204ENST00000625463 SNX6Q9UNH7 406 aa5.33□□□□□ -1.56
CHD2-204ENST00000625463 SIK3Q9Y2K2 1263 aa5.33□□□□□ -1.56
CHD2-204ENST00000625463 SNX14Q9Y5W7 946 aa5.33□□□□□ -1.56
CHD2-204ENST00000625463 CAPN6Q9Y6Q1 641 aa5.33□□□□□ -1.56
CHD2-204ENST00000625463 DGKBQ9Y6T7 804 aa5.33□□□□□ -1.56
CHD2-204ENST00000625463 ARAP1Q96P48 1450 aa5.32□□□□□ -1.56
CHD2-204ENST00000625463 A0A0G2JS52 829 aa5.32□□□□□ -1.56
CHD2-204ENST00000625463 FAM221AA4D161 298 aa5.32□□□□□ -1.56
CHD2-204ENST00000625463 SMIM23A6NLE4 172 aa5.32□□□□□ -1.56
CHD2-204ENST00000625463 A8MUI8 341 aa5.32□□□□□ -1.56
CHD2-204ENST00000625463 DCDC2CA8MYV0 355 aa5.32□□□□□ -1.56
CHD2-204ENST00000625463 HSBP1L1C9JCN9 74 aa5.32□□□□□ -1.56
CHD2-204ENST00000625463 F8W036 122 aa5.32□□□□□ -1.56
CHD2-204ENST00000625463 K7EPI3 171 aa5.32□□□□□ -1.56
CHD2-204ENST00000625463 WRBO00258 174 aa5.32□□□□□ -1.56
CHD2-204ENST00000625463 TXNDC9O14530 226 aa5.32□□□□□ -1.56
CHD2-204ENST00000625463 ZBTB24O43167 697 aaPredicted RBP5.32□□□□□ -1.56
CHD2-204ENST00000625463 NUAK1O60285 661 aa5.32□□□□□ -1.56
CHD2-204ENST00000625463 CTNND1O60716 968 aaKnown RBP5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms