RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 NCOA4Q13772 614 aa15.47■□□□□ 0.07
PNKP-218ENST00000625299 GEN1Q17RS7 908 aa15.47■□□□□ 0.07
PNKP-218ENST00000625299 FAM26FQ5R3K3 315 aa15.47■□□□□ 0.07
PNKP-218ENST00000625299 C10orf120Q5SQS8 335 aa15.47■□□□□ 0.07
PNKP-218ENST00000625299 EPM2AIP1Q7L775 607 aaPredicted RBP15.47■□□□□ 0.07
PNKP-218ENST00000625299 METTL3Q86U44 580 aaKnown RBP15.47■□□□□ 0.07
PNKP-218ENST00000625299 ZNF507Q8TCN5 953 aa15.47■□□□□ 0.07
PNKP-218ENST00000625299 UCMAQ8WVF2 138 aa15.47■□□□□ 0.07
PNKP-218ENST00000625299 TMEM131Q92545 1883 aa15.47■□□□□ 0.07
PNKP-218ENST00000625299 DCBLD2Q96PD2 775 aa15.47■□□□□ 0.07
PNKP-218ENST00000625299 CDC6Q99741 560 aa15.47■□□□□ 0.07
PNKP-218ENST00000625299 LRRC27Q9C0I9 530 aa15.47■□□□□ 0.07
PNKP-218ENST00000625299 CYLDQ9NQC7 956 aa15.47■□□□□ 0.07
PNKP-218ENST00000625299 HMGXB4Q9UGU5 601 aa15.47■□□□□ 0.07
PNKP-218ENST00000625299 NFE2L3Q9Y4A8 694 aa15.47■□□□□ 0.07
PNKP-218ENST00000625299 SETXQ7Z333 2677 aaKnown RBP15.47■□□□□ 0.07
PNKP-218ENST00000625299 A0A1W2PQH9 124 aa15.46■□□□□ 0.07
PNKP-218ENST00000625299 TRABD2BA6NFA1 517 aa15.46■□□□□ 0.07
PNKP-218ENST00000625299 EXOC3O60645 756 aa15.46■□□□□ 0.07
PNKP-218ENST00000625299 FAM200BP0CF97 657 aa15.46■□□□□ 0.07
PNKP-218ENST00000625299 RARGP13631 454 aa15.46■□□□□ 0.07
PNKP-218ENST00000625299 ACO1P21399 889 aaKnown RBP15.46■□□□□ 0.07
PNKP-218ENST00000625299 CSNK1EP49674 416 aaKnown RBP15.46■□□□□ 0.07
PNKP-218ENST00000625299 NDST1P52848 882 aa15.46■□□□□ 0.07
PNKP-218ENST00000625299 MFAP3P55082 362 aa15.46■□□□□ 0.07
PNKP-218ENST00000625299 C12orf29Q8N999 325 aa15.46■□□□□ 0.07
PNKP-218ENST00000625299 BAHD1Q8TBE0 780 aaPredicted RBP15.46■□□□□ 0.07
PNKP-218ENST00000625299 DHX58Q96C10 678 aa15.46■□□□□ 0.07
PNKP-218ENST00000625299 P2RY11Q96G91 374 aa15.46■□□□□ 0.07
PNKP-218ENST00000625299 NMUR1Q9HB89 426 aa15.46■□□□□ 0.07
PNKP-218ENST00000625299 THAP10Q9P2Z0 257 aaPredicted RBP15.46■□□□□ 0.07
PNKP-218ENST00000625299 DNMT3LQ9UJW3 386 aa15.46■□□□□ 0.07
PNKP-218ENST00000625299 NAGPAQ9UK23 515 aa15.46■□□□□ 0.07
PNKP-218ENST00000625299 SCML2Q9UQR0 700 aa15.46■□□□□ 0.07
PNKP-218ENST00000625299 BTBD3Q9Y2F9 522 aa15.46■□□□□ 0.07
PNKP-218ENST00000625299 ASXL3Q9C0F0 2248 aa15.45■□□□□ 0.06
PNKP-218ENST00000625299 UBE4BO95155 1302 aa15.45■□□□□ 0.06
PNKP-218ENST00000625299 KNL1Q8NG31 2342 aa15.45■□□□□ 0.06
PNKP-218ENST00000625299 EPHX1P07099 455 aa15.45■□□□□ 0.06
PNKP-218ENST00000625299 HMBSP08397 361 aa15.45■□□□□ 0.06
PNKP-218ENST00000625299 PLA2G4AP47712 749 aa15.45■□□□□ 0.06
PNKP-218ENST00000625299 Q6ZNB5 142 aa15.45■□□□□ 0.06
PNKP-218ENST00000625299 GALNT15Q8N3T1 639 aa15.45■□□□□ 0.06
PNKP-218ENST00000625299 PLEKHO2Q8TD55 490 aa15.45■□□□□ 0.06
PNKP-218ENST00000625299 USP28Q96RU2 1077 aa15.45■□□□□ 0.06
PNKP-218ENST00000625299 NUP58Q9BVL2 599 aa15.45■□□□□ 0.06
PNKP-218ENST00000625299 CIPCQ9C0C6 399 aa15.45■□□□□ 0.06
PNKP-218ENST00000625299 VRTNQ9H8Y1 702 aa15.45■□□□□ 0.06
PNKP-218ENST00000625299 CSNK1G1Q9HCP0 422 aa15.45■□□□□ 0.06
PNKP-218ENST00000625299 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.45■□□□□ 0.06
PNKP-218ENST00000625299 RASAL2Q9UJF2 1139 aa15.45■□□□□ 0.06
PNKP-218ENST00000625299 SLC27A6Q9Y2P4 619 aa15.45■□□□□ 0.06
PNKP-218ENST00000625299 PCDHGB2Q9Y5G2 931 aa15.45■□□□□ 0.06
PNKP-218ENST00000625299 CKAP5Q14008 2032 aa15.44■□□□□ 0.06
PNKP-218ENST00000625299 NUMA1Q14980 2115 aa15.44■□□□□ 0.06
PNKP-218ENST00000625299 CABIN1Q9Y6J0 2220 aa15.44■□□□□ 0.06
PNKP-218ENST00000625299 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.44■□□□□ 0.06
PNKP-218ENST00000625299 LRRIQ3A6PVS8 624 aaPredicted RBP15.44■□□□□ 0.06
PNKP-218ENST00000625299 STC2O76061 302 aa15.44■□□□□ 0.06
PNKP-218ENST00000625299 KIF20AO95235 890 aa15.44■□□□□ 0.06
PNKP-218ENST00000625299 P4HA1P13674 534 aa15.44■□□□□ 0.06
PNKP-218ENST00000625299 PDCP20941 246 aa15.44■□□□□ 0.06
PNKP-218ENST00000625299 PRKCHP24723 683 aa15.44■□□□□ 0.06
PNKP-218ENST00000625299 AFF3P51826 1226 aaKnown RBP15.44■□□□□ 0.06
PNKP-218ENST00000625299 COPAP53621 1224 aa15.44■□□□□ 0.06
PNKP-218ENST00000625299 AMPD3Q01432 767 aa15.44■□□□□ 0.06
PNKP-218ENST00000625299 ARID5AQ03989 594 aa15.44■□□□□ 0.06
PNKP-218ENST00000625299 ZNF234Q14588 700 aa15.44■□□□□ 0.06
PNKP-218ENST00000625299 SUZ12Q15022 739 aaKnown RBP15.44■□□□□ 0.06
PNKP-218ENST00000625299 SLC39A14Q15043 492 aa15.44■□□□□ 0.06
PNKP-218ENST00000625299 KIF19Q2TAC6 998 aa15.44■□□□□ 0.06
PNKP-218ENST00000625299 FYB2Q5VWT5 728 aa15.44■□□□□ 0.06
PNKP-218ENST00000625299 CLEC20AQ6ZU45 233 aa15.44■□□□□ 0.06
PNKP-218ENST00000625299 ANKS1BQ7Z6G8 1248 aa15.44■□□□□ 0.06
PNKP-218ENST00000625299 PIP4K2CQ8TBX8 421 aa15.44■□□□□ 0.06
PNKP-218ENST00000625299 SORCS1Q8WY21 1168 aa15.44■□□□□ 0.06
PNKP-218ENST00000625299 KBTBD4Q9NVX7 518 aa15.44■□□□□ 0.06
PNKP-218ENST00000625299 DKK4Q9UBT3 224 aa15.44■□□□□ 0.06
PNKP-218ENST00000625299 FBXO10Q9UK96 956 aa15.44■□□□□ 0.06
PNKP-218ENST00000625299 SNX11Q9Y5W9 270 aa15.44■□□□□ 0.06
PNKP-218ENST00000625299 SLCO1B1Q9Y6L6 691 aa15.44■□□□□ 0.06
PNKP-218ENST00000625299 KCNK3O14649 394 aa15.43■□□□□ 0.06
PNKP-218ENST00000625299 NPC1O15118 1278 aa15.43■□□□□ 0.06
PNKP-218ENST00000625299 VNN1O95497 513 aa15.43■□□□□ 0.06
PNKP-218ENST00000625299 PENKP01210 267 aaPredicted RBP15.43■□□□□ 0.06
PNKP-218ENST00000625299 KLKB1P03952 638 aa15.43■□□□□ 0.06
PNKP-218ENST00000625299 PRB1P04280 392 aa15.43■□□□□ 0.06
PNKP-218ENST00000625299 TRIM21P19474 475 aaKnown RBP15.43■□□□□ 0.06
PNKP-218ENST00000625299 CASP1P29466 404 aa15.43■□□□□ 0.06
PNKP-218ENST00000625299 ABCG1P45844 678 aa15.43■□□□□ 0.06
PNKP-218ENST00000625299 ZNF132P52740 706 aa15.43■□□□□ 0.06
PNKP-218ENST00000625299 SNRPFP62306 86 aaKnown RBP15.43■□□□□ 0.06
PNKP-218ENST00000625299 IL9RQ01113 521 aa15.43■□□□□ 0.06
PNKP-218ENST00000625299 STK38Q15208 465 aa15.43■□□□□ 0.06
PNKP-218ENST00000625299 BMT2Q1RMZ1 405 aa15.43■□□□□ 0.06
PNKP-218ENST00000625299 SPOPLQ6IQ16 392 aa15.43■□□□□ 0.06
PNKP-218ENST00000625299 LAYNQ6UX15 382 aa15.43■□□□□ 0.06
PNKP-218ENST00000625299 SERPINA13PQ6UXR4 307 aa15.43■□□□□ 0.06
PNKP-218ENST00000625299 TADA2BQ86TJ2 420 aa15.43■□□□□ 0.06
PNKP-218ENST00000625299 C6orf106Q9H6K1 298 aaPredicted RBP15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms