RNA–Protein interactions for RNA: ENST00000625293.1

TREX1-205, Transcript of three prime repair exonuclease 1, humanhuman

BASIC

Gene TREX1, Length 1,783 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-205ENST00000625293 LONRF1Q17RB8 773 aa20.42■□□□□ 0.86
TREX1-205ENST00000625293 SYPL2Q5VXT5 272 aa20.42■□□□□ 0.86
TREX1-205ENST00000625293 METTL23Q86XA0 190 aa20.42■□□□□ 0.86
TREX1-205ENST00000625293 CSPG4P5Q96PW8 444 aa20.42■□□□□ 0.86
TREX1-205ENST00000625293 RCOR3Q9P2K3 495 aaPredicted RBP20.42■□□□□ 0.86
TREX1-205ENST00000625293 CFAP69A5D8W1 941 aa20.41■□□□□ 0.86
TREX1-205ENST00000625293 B4GALT3O60512 393 aa20.41■□□□□ 0.86
TREX1-205ENST00000625293 ITGB1P05556 798 aa20.41■□□□□ 0.86
TREX1-205ENST00000625293 ZFXP17010 805 aaPredicted RBP20.41■□□□□ 0.86
TREX1-205ENST00000625293 TYMPP19971 482 aa20.41■□□□□ 0.86
TREX1-205ENST00000625293 RDXP35241 583 aaKnown RBP20.41■□□□□ 0.86
TREX1-205ENST00000625293 MMP13P45452 471 aa20.41■□□□□ 0.86
TREX1-205ENST00000625293 NRLP54845 237 aa20.41■□□□□ 0.86
TREX1-205ENST00000625293 TLE2Q04725 743 aa20.41■□□□□ 0.86
TREX1-205ENST00000625293 DSC1Q08554 894 aa20.41■□□□□ 0.86
TREX1-205ENST00000625293 FASTKD3Q14CZ7 662 aaKnown RBP20.41■□□□□ 0.86
TREX1-205ENST00000625293 SLC24A5Q71RS6 500 aa20.41■□□□□ 0.86
TREX1-205ENST00000625293 FAM131BQ86XD5 332 aa20.41■□□□□ 0.86
TREX1-205ENST00000625293 TTC25Q96NG3 672 aa20.41■□□□□ 0.86
TREX1-205ENST00000625293 CWC15Q9P013 229 aaKnown RBP20.41■□□□□ 0.86
TREX1-205ENST00000625293 STAP1Q9ULZ2 295 aa20.41■□□□□ 0.86
TREX1-205ENST00000625293 YJEFN3A6XGL0 299 aa20.41■□□□□ 0.86
TREX1-205ENST00000625293 E7ENQ6 273 aa20.41■□□□□ 0.86
TREX1-205ENST00000625293 E7ESA3 106 aa20.41■□□□□ 0.86
TREX1-205ENST00000625293 H7C0C1 242 aa20.41■□□□□ 0.86
TREX1-205ENST00000625293 ARVCFO00192 962 aa20.41■□□□□ 0.86
TREX1-205ENST00000625293 PQBP1O60828 265 aaKnown RBP20.41■□□□□ 0.86
TREX1-205ENST00000625293 TMEM63AO94886 807 aa20.41■□□□□ 0.86
TREX1-205ENST00000625293 ATP5OP48047 213 aa20.41■□□□□ 0.86
TREX1-205ENST00000625293 GAD2Q05329 585 aa20.41■□□□□ 0.86
TREX1-205ENST00000625293 STAT4Q14765 748 aa20.41■□□□□ 0.86
TREX1-205ENST00000625293 SKIDA1Q1XH10 827 aa20.41■□□□□ 0.86
TREX1-205ENST00000625293 CLLU1OSQ5K130 101 aa20.41■□□□□ 0.86
TREX1-205ENST00000625293 CENPUQ71F23 418 aa20.41■□□□□ 0.86
TREX1-205ENST00000625293 B4GALNT4Q76KP1 1039 aa20.41■□□□□ 0.86
TREX1-205ENST00000625293 OR10T2Q8NGX3 314 aa20.41■□□□□ 0.86
TREX1-205ENST00000625293 HASPINQ8TF76 798 aa20.41■□□□□ 0.86
TREX1-205ENST00000625293 STMN4Q9H169 189 aaPredicted RBP20.41■□□□□ 0.86
TREX1-205ENST00000625293 CNOT10Q9H9A5 744 aaKnown RBP20.41■□□□□ 0.86
TREX1-205ENST00000625293 TMLHEQ9NVH6 421 aa20.41■□□□□ 0.86
TREX1-205ENST00000625293 EURLQ9NYK6 297 aa20.41■□□□□ 0.86
TREX1-205ENST00000625293 TDRD15B5MCY1 1934 aaKnown RBP20.4■□□□□ 0.86
TREX1-205ENST00000625293 TCRBV7S3A2A0A539 114 aa20.4■□□□□ 0.86
TREX1-205ENST00000625293 F8W810 466 aa20.4■□□□□ 0.86
TREX1-205ENST00000625293 CBLBQ13191 982 aa20.4■□□□□ 0.86
TREX1-205ENST00000625293 PYROXD2Q8N2H3 581 aa20.4■□□□□ 0.86
TREX1-205ENST00000625293 RHOBTB2Q9BYZ6 727 aa20.4■□□□□ 0.86
TREX1-205ENST00000625293 LGALS13Q9UHV8 139 aa20.4■□□□□ 0.86
TREX1-205ENST00000625293 NAALADL1Q9UQQ1 740 aa20.4■□□□□ 0.86
TREX1-205ENST00000625293 HEY1Q9Y5J3 304 aa20.4■□□□□ 0.86
TREX1-205ENST00000625293 DDHD2O94830 711 aa20.39■□□□□ 0.86
TREX1-205ENST00000625293 RBL1P28749 1068 aa20.39■□□□□ 0.86
TREX1-205ENST00000625293 NR2C2P49116 596 aa20.39■□□□□ 0.86
TREX1-205ENST00000625293 CDK7P50613 346 aa20.39■□□□□ 0.86
TREX1-205ENST00000625293 GBE1Q04446 702 aa20.39■□□□□ 0.86
TREX1-205ENST00000625293 SLC10A2Q12908 348 aaPredicted RBP20.39■□□□□ 0.86
TREX1-205ENST00000625293 XRCC4Q13426 336 aa20.39■□□□□ 0.86
TREX1-205ENST00000625293 HIF1AQ16665 826 aa20.39■□□□□ 0.86
TREX1-205ENST00000625293 NCBP2-AS2Q69YL0 99 aa20.39■□□□□ 0.86
TREX1-205ENST00000625293 GLB1LQ6UWU2 654 aa20.39■□□□□ 0.86
TREX1-205ENST00000625293 LRRTM3Q86VH5 581 aa20.39■□□□□ 0.86
TREX1-205ENST00000625293 SCML4Q8N228 414 aa20.39■□□□□ 0.86
TREX1-205ENST00000625293 PGAP3Q96FM1 320 aaPredicted RBP20.39■□□□□ 0.86
TREX1-205ENST00000625293 TMEM209Q96SK2 561 aa20.39■□□□□ 0.86
TREX1-205ENST00000625293 SLC9A7Q96T83 725 aa20.39■□□□□ 0.86
TREX1-205ENST00000625293 WDR83Q9BRX9 315 aaKnown RBP20.39■□□□□ 0.86
TREX1-205ENST00000625293 PRDM16Q9HAZ2 1276 aa20.39■□□□□ 0.86
TREX1-205ENST00000625293 A0A087WUV0 522 aaPredicted RBP20.39■□□□□ 0.85
TREX1-205ENST00000625293 TMEM189-UBE2V1I3L0A0 370 aa20.39■□□□□ 0.85
TREX1-205ENST00000625293 M0QYT0 321 aa20.39■□□□□ 0.85
TREX1-205ENST00000625293 ZBED1O96006 694 aa20.39■□□□□ 0.85
TREX1-205ENST00000625293 IVLP07476 585 aa20.39■□□□□ 0.85
TREX1-205ENST00000625293 GOT1P17174 413 aa20.39■□□□□ 0.85
TREX1-205ENST00000625293 KCNJ11Q14654 390 aa20.39■□□□□ 0.85
TREX1-205ENST00000625293 FNBP1LQ5T0N5 605 aa20.39■□□□□ 0.85
TREX1-205ENST00000625293 OVOS1Q6IE37 1185 aa20.39■□□□□ 0.85
TREX1-205ENST00000625293 ZNF280BQ86YH2 543 aa20.39■□□□□ 0.85
TREX1-205ENST00000625293 WDR6Q9NNW5 1121 aaKnown RBP20.39■□□□□ 0.85
TREX1-205ENST00000625293 PIGVQ9NUD9 493 aa20.39■□□□□ 0.85
TREX1-205ENST00000625293 PAK5Q9P286 719 aa20.39■□□□□ 0.85
TREX1-205ENST00000625293 PCDHB8Q9UN66 801 aa20.39■□□□□ 0.85
TREX1-205ENST00000625293 ARHGEF37A1IGU5 675 aa20.38■□□□□ 0.85
TREX1-205ENST00000625293 GOLGA8MH3BSY2 632 aa20.38■□□□□ 0.85
TREX1-205ENST00000625293 KCNN4O15554 427 aa20.38■□□□□ 0.85
TREX1-205ENST00000625293 USP17L7P0C7H9 530 aa20.38■□□□□ 0.85
TREX1-205ENST00000625293 HNRNPH2P55795 449 aaKnown RBP20.38■□□□□ 0.85
TREX1-205ENST00000625293 ARL4CP56559 192 aa20.38■□□□□ 0.85
TREX1-205ENST00000625293 DEUP1Q05D60 604 aa20.38■□□□□ 0.85
TREX1-205ENST00000625293 PDIA2Q13087 525 aaKnown RBP20.38■□□□□ 0.85
TREX1-205ENST00000625293 MSS51Q4VC12 460 aa20.38■□□□□ 0.85
TREX1-205ENST00000625293 PM20D1Q6GTS8 502 aa20.38■□□□□ 0.85
TREX1-205ENST00000625293 EXOC3L1Q86VI1 746 aa20.38■□□□□ 0.85
TREX1-205ENST00000625293 CDKL3Q8IVW4 592 aaPredicted RBP20.38■□□□□ 0.85
TREX1-205ENST00000625293 IRGQQ8WZA9 623 aa20.38■□□□□ 0.85
TREX1-205ENST00000625293 NTAN1Q96AB6 310 aa20.38■□□□□ 0.85
TREX1-205ENST00000625293 OLFM3Q96PB7 478 aa20.38■□□□□ 0.85
TREX1-205ENST00000625293 EPN3Q9H201 632 aa20.38■□□□□ 0.85
TREX1-205ENST00000625293 PNPLA8Q9NP80 782 aa20.38■□□□□ 0.85
TREX1-205ENST00000625293 ETNK2Q9NVF9 386 aa20.38■□□□□ 0.85
TREX1-205ENST00000625293 LAMA2P24043 3122 aaKnown RBP20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms