RNA–Protein interactions for RNA: ENST00000625171.3

LINC00963-220, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 830 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-220ENST00000625171 HMGA1P17096 107 aaKnown RBP12.24□□□□□ -0.45
LINC00963-220ENST00000625171 ATF6P18850 670 aa12.24□□□□□ -0.45
LINC00963-220ENST00000625171 TFE3P19532 575 aaPredicted RBP12.24□□□□□ -0.45
LINC00963-220ENST00000625171 L1CAMP32004 1257 aa12.24□□□□□ -0.45
LINC00963-220ENST00000625171 HTR7P34969 479 aa12.24□□□□□ -0.45
LINC00963-220ENST00000625171 SSR1P43307 286 aaKnown RBP12.24□□□□□ -0.45
LINC00963-220ENST00000625171 SULT1E1P49888 294 aa12.24□□□□□ -0.45
LINC00963-220ENST00000625171 DRG2P55039 364 aaKnown RBP12.24□□□□□ -0.45
LINC00963-220ENST00000625171 ERVK-21P61565 698 aa12.24□□□□□ -0.45
LINC00963-220ENST00000625171 DEUP1Q05D60 604 aa12.24□□□□□ -0.45
LINC00963-220ENST00000625171 PLD1Q13393 1074 aa12.24□□□□□ -0.45
LINC00963-220ENST00000625171 DHX34Q14147 1143 aaKnown RBP12.24□□□□□ -0.45
LINC00963-220ENST00000625171 TFDP2Q14188 446 aa12.24□□□□□ -0.45
LINC00963-220ENST00000625171 PPP2R5DQ14738 602 aa12.24□□□□□ -0.45
LINC00963-220ENST00000625171 PTPROQ16827 1216 aa12.24□□□□□ -0.45
LINC00963-220ENST00000625171 ARL13BQ3SXY8 428 aa12.24□□□□□ -0.45
LINC00963-220ENST00000625171 DAB2IPQ5VWQ8 1189 aa12.24□□□□□ -0.45
LINC00963-220ENST00000625171 BTBD8Q5XKL5 378 aa12.24□□□□□ -0.45
LINC00963-220ENST00000625171 SYDE1Q6ZW31 735 aaPredicted RBP12.24□□□□□ -0.45
LINC00963-220ENST00000625171 KCTD6Q8NC69 237 aa12.24□□□□□ -0.45
LINC00963-220ENST00000625171 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.24□□□□□ -0.45
LINC00963-220ENST00000625171 SEC14L1Q92503 715 aa12.24□□□□□ -0.45
LINC00963-220ENST00000625171 NDRG1Q92597 394 aaKnown RBP12.24□□□□□ -0.45
LINC00963-220ENST00000625171 PGLYRP2Q96PD5 576 aa12.24□□□□□ -0.45
LINC00963-220ENST00000625171 HAPLN3Q96S86 360 aa12.24□□□□□ -0.45
LINC00963-220ENST00000625171 SNRNP25Q9BV90 132 aaKnown RBP12.24□□□□□ -0.45
LINC00963-220ENST00000625171 C1QTNF1Q9BXJ1 281 aa12.24□□□□□ -0.45
LINC00963-220ENST00000625171 EMILIN2Q9BXX0 1053 aa12.24□□□□□ -0.45
LINC00963-220ENST00000625171 OSBPL2Q9H1P3 480 aa12.24□□□□□ -0.45
LINC00963-220ENST00000625171 PRDM12Q9H4Q4 367 aa12.24□□□□□ -0.45
LINC00963-220ENST00000625171 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.24□□□□□ -0.45
LINC00963-220ENST00000625171 CALCOCO1Q9P1Z2 691 aa12.24□□□□□ -0.45
LINC00963-220ENST00000625171 PCSK1NQ9UHG2 260 aa12.24□□□□□ -0.45
LINC00963-220ENST00000625171 MSRAQ9UJ68 235 aa12.24□□□□□ -0.45
LINC00963-220ENST00000625171 SLC27A5Q9Y2P5 690 aa12.24□□□□□ -0.45
LINC00963-220ENST00000625171 LRRD1A4D1F6 860 aa12.23□□□□□ -0.45
LINC00963-220ENST00000625171 LCHNA4D1U4 455 aa12.23□□□□□ -0.45
LINC00963-220ENST00000625171 FAM187AA6NFU0 413 aa12.23□□□□□ -0.45
LINC00963-220ENST00000625171 SOBPA7XYQ1 873 aa12.23□□□□□ -0.45
LINC00963-220ENST00000625171 IRAK2O43187 625 aa12.23□□□□□ -0.45
LINC00963-220ENST00000625171 CXCL14O95715 111 aa12.23□□□□□ -0.45
LINC00963-220ENST00000625171 KRT1P04264 644 aa12.23□□□□□ -0.45
LINC00963-220ENST00000625171 ADH1AP07327 375 aa12.23□□□□□ -0.45
LINC00963-220ENST00000625171 POU2F2P09086 479 aa12.23□□□□□ -0.45
LINC00963-220ENST00000625171 CNPP09543 421 aaKnown RBP12.23□□□□□ -0.45
LINC00963-220ENST00000625171 SLC2A3P11169 496 aa12.23□□□□□ -0.45
LINC00963-220ENST00000625171 ZFXP17010 805 aaPredicted RBP12.23□□□□□ -0.45
LINC00963-220ENST00000625171 PFKLP17858 780 aa12.23□□□□□ -0.45
LINC00963-220ENST00000625171 RPL17P18621 184 aaKnown RBP12.23□□□□□ -0.45
LINC00963-220ENST00000625171 TNFRSF8P28908 595 aa12.23□□□□□ -0.45
LINC00963-220ENST00000625171 ELF1P32519 619 aa12.23□□□□□ -0.45
LINC00963-220ENST00000625171 PBX2P40425 430 aa12.23□□□□□ -0.45
LINC00963-220ENST00000625171 ALDH1A3P47895 512 aa12.23□□□□□ -0.45
LINC00963-220ENST00000625171 DNA2P51530 1060 aa12.23□□□□□ -0.45
LINC00963-220ENST00000625171 KPNA1P52294 538 aaPredicted RBP12.23□□□□□ -0.45
LINC00963-220ENST00000625171 ARPP19P56211 112 aa12.23□□□□□ -0.45
LINC00963-220ENST00000625171 USP46P62068 366 aa12.23□□□□□ -0.45
LINC00963-220ENST00000625171 NRG1Q02297 640 aaPredicted RBP12.23□□□□□ -0.45
LINC00963-220ENST00000625171 LMNB2Q03252 620 aa12.23□□□□□ -0.45
LINC00963-220ENST00000625171 RING1Q06587 406 aa12.23□□□□□ -0.45
LINC00963-220ENST00000625171 SEMA3BQ13214 749 aa12.23□□□□□ -0.45
LINC00963-220ENST00000625171 DPYSL3Q14195 570 aa12.23□□□□□ -0.45
LINC00963-220ENST00000625171 SMC1AQ14683 1233 aaKnown RBP12.23□□□□□ -0.45
LINC00963-220ENST00000625171 ODF2Q5BJF6 829 aa12.23□□□□□ -0.45
LINC00963-220ENST00000625171 SLC9A4Q6AI14 798 aa12.23□□□□□ -0.45
LINC00963-220ENST00000625171 AADACL2Q6P093 401 aa12.23□□□□□ -0.45
LINC00963-220ENST00000625171 CCDC149Q6ZUS6 474 aa12.23□□□□□ -0.45
LINC00963-220ENST00000625171 SND1Q7KZF4 910 aaKnown RBP eCLIP12.23□□□□□ -0.45
LINC00963-220ENST00000625171 ANKS1BQ7Z6G8 1248 aa12.23□□□□□ -0.45
LINC00963-220ENST00000625171 TADA2BQ86TJ2 420 aa12.23□□□□□ -0.45
LINC00963-220ENST00000625171 TTC9BQ8N6N2 239 aa12.23□□□□□ -0.45
LINC00963-220ENST00000625171 DQX1Q8TE96 717 aaKnown RBP12.23□□□□□ -0.45
LINC00963-220ENST00000625171 HNRNPLLQ8WVV9 542 aaKnown RBP12.23□□□□□ -0.45
LINC00963-220ENST00000625171 NKD2Q969F2 451 aaPredicted RBP12.23□□□□□ -0.45
LINC00963-220ENST00000625171 PSMG2Q969U7 264 aa12.23□□□□□ -0.45
LINC00963-220ENST00000625171 RNF25Q96BH1 459 aaPredicted RBP12.23□□□□□ -0.45
LINC00963-220ENST00000625171 SLC39A13Q96H72 371 aa12.23□□□□□ -0.45
LINC00963-220ENST00000625171 C1orf74Q96LT6 269 aa12.23□□□□□ -0.45
LINC00963-220ENST00000625171 SERPINB11Q96P15 392 aa12.23□□□□□ -0.45
LINC00963-220ENST00000625171 KLHL5Q96PQ7 755 aa12.23□□□□□ -0.45
LINC00963-220ENST00000625171 RNF157Q96PX1 679 aa12.23□□□□□ -0.45
LINC00963-220ENST00000625171 LRRC1Q9BTT6 524 aa12.23□□□□□ -0.45
LINC00963-220ENST00000625171 RETREG1Q9H6L5 497 aa12.23□□□□□ -0.45
LINC00963-220ENST00000625171 ANKZF1Q9H8Y5 726 aa12.23□□□□□ -0.45
LINC00963-220ENST00000625171 ZWILCHQ9H900 591 aa12.23□□□□□ -0.45
LINC00963-220ENST00000625171 PCDH18Q9HCL0 1135 aa12.23□□□□□ -0.45
LINC00963-220ENST00000625171 PIGVQ9NUD9 493 aa12.23□□□□□ -0.45
LINC00963-220ENST00000625171 ARHGEF38Q9NXL2 777 aa12.23□□□□□ -0.45
LINC00963-220ENST00000625171 UXTQ9UBK9 157 aaPredicted RBP12.23□□□□□ -0.45
LINC00963-220ENST00000625171 TLR6Q9Y2C9 796 aa12.23□□□□□ -0.45
LINC00963-220ENST00000625171 NR2E1Q9Y466 385 aa12.23□□□□□ -0.45
LINC00963-220ENST00000625171 XIRP2A4UGR9 3374 aa12.23□□□□□ -0.45
LINC00963-220ENST00000625171 PLXNA3P51805 1871 aa12.23□□□□□ -0.45
LINC00963-220ENST00000625171 C2orf71A6NGG8 1288 aa12.22□□□□□ -0.45
LINC00963-220ENST00000625171 H3BNC9 293 aa12.22□□□□□ -0.45
LINC00963-220ENST00000625171 APOC4-APOC2K7ER74 178 aa12.22□□□□□ -0.45
LINC00963-220ENST00000625171 ZNF189O75820 626 aaPredicted RBP12.22□□□□□ -0.45
LINC00963-220ENST00000625171 APOC2P02655 101 aa12.22□□□□□ -0.45
LINC00963-220ENST00000625171 HOXA9P31269 272 aa12.22□□□□□ -0.45
LINC00963-220ENST00000625171 HOXD11P31277 338 aaPredicted RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms