RNA–Protein interactions for RNA: ENST00000624700.3

CDKL5-207, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 564 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-207ENST00000624700 CFHR3Q02985 330 aa4.83□□□□□ -1.64
CDKL5-207ENST00000624700 CCDC15Q0P6D6 951 aa4.83□□□□□ -1.64
CDKL5-207ENST00000624700 CBFBQ13951 182 aa4.83□□□□□ -1.64
CDKL5-207ENST00000624700 PWP2Q15269 919 aaKnown RBP4.83□□□□□ -1.64
CDKL5-207ENST00000624700 P3H1Q32P28 736 aa4.83□□□□□ -1.64
CDKL5-207ENST00000624700 TBRG1Q3YBR2 411 aa4.83□□□□□ -1.64
CDKL5-207ENST00000624700 TRIM60Q495X7 471 aa4.83□□□□□ -1.64
CDKL5-207ENST00000624700 AASDHQ4L235 1098 aaPredicted RBP4.83□□□□□ -1.64
CDKL5-207ENST00000624700 TMEM196Q5HYL7 178 aa4.83□□□□□ -1.64
CDKL5-207ENST00000624700 TSTD2Q5T7W7 516 aa4.83□□□□□ -1.64
CDKL5-207ENST00000624700 FAM90A2PQ658T7 463 aa4.83□□□□□ -1.64
CDKL5-207ENST00000624700 SUMO4Q6EEV6 95 aa4.83□□□□□ -1.64
CDKL5-207ENST00000624700 CCDC144NLQ6NUI1 221 aa4.83□□□□□ -1.64
CDKL5-207ENST00000624700 RAB11FIP2Q7L804 512 aa4.83□□□□□ -1.64
CDKL5-207ENST00000624700 RASAL3Q86YV0 1011 aa4.83□□□□□ -1.64
CDKL5-207ENST00000624700 GALNT15Q8N3T1 639 aa4.83□□□□□ -1.64
CDKL5-207ENST00000624700 MYCT1Q8N699 235 aa4.83□□□□□ -1.64
CDKL5-207ENST00000624700 ANKRD42Q8N9B4 389 aa4.83□□□□□ -1.64
CDKL5-207ENST00000624700 TERB1Q8NA31 727 aa4.83□□□□□ -1.64
CDKL5-207ENST00000624700 OTUD7AQ8TE49 926 aaPredicted RBP4.83□□□□□ -1.64
CDKL5-207ENST00000624700 ADAMTS18Q8TE60 1221 aa4.83□□□□□ -1.64
CDKL5-207ENST00000624700 STYXQ8WUJ0 223 aa4.83□□□□□ -1.64
CDKL5-207ENST00000624700 SDCCAG3Q96C92 435 aa4.83□□□□□ -1.64
CDKL5-207ENST00000624700 CCDC17Q96LX7 622 aa4.83□□□□□ -1.64
CDKL5-207ENST00000624700 RTKNQ9BST9 563 aa4.83□□□□□ -1.64
CDKL5-207ENST00000624700 TMEM120AQ9BXJ8 343 aa4.83□□□□□ -1.64
CDKL5-207ENST00000624700 AS3MTQ9HBK9 375 aa4.83□□□□□ -1.64
CDKL5-207ENST00000624700 SEMA4GQ9NTN9 838 aa4.83□□□□□ -1.64
CDKL5-207ENST00000624700 FBXO28Q9NVF7 368 aa4.83□□□□□ -1.64
CDKL5-207ENST00000624700 UBE2J1Q9Y385 318 aaPredicted RBP4.83□□□□□ -1.64
CDKL5-207ENST00000624700 WNT6Q9Y6F9 365 aa4.83□□□□□ -1.64
CDKL5-207ENST00000624700 AQP12BA6NM10 295 aa4.82□□□□□ -1.64
CDKL5-207ENST00000624700 UBE2Q2LH0YL09 131 aa4.82□□□□□ -1.64
CDKL5-207ENST00000624700 ACKR2O00590 384 aa4.82□□□□□ -1.64
CDKL5-207ENST00000624700 FCHO1O14526 889 aa4.82□□□□□ -1.64
CDKL5-207ENST00000624700 CTIFO43310 598 aaKnown RBP4.82□□□□□ -1.64
CDKL5-207ENST00000624700 DNPH1O43598 174 aa4.82□□□□□ -1.64
CDKL5-207ENST00000624700 ASNA1O43681 348 aa4.82□□□□□ -1.64
CDKL5-207ENST00000624700 TAF5LO75529 589 aa4.82□□□□□ -1.64
CDKL5-207ENST00000624700 ACTL6BO94805 426 aa4.82□□□□□ -1.64
CDKL5-207ENST00000624700 MT-CO3P00414 261 aa4.82□□□□□ -1.64
CDKL5-207ENST00000624700 HNRNPCP07910 306 aaKnown RBP eCLIP4.82□□□□□ -1.64
CDKL5-207ENST00000624700 TMIGD3P0DMS9 266 aaPredicted RBP4.82□□□□□ -1.64
CDKL5-207ENST00000624700 HSD3B1P14060 373 aa4.82□□□□□ -1.64
CDKL5-207ENST00000624700 ITPKBP27987 946 aa4.82□□□□□ -1.64
CDKL5-207ENST00000624700 DUSP1P28562 367 aa4.82□□□□□ -1.64
CDKL5-207ENST00000624700 PLA2G5P39877 138 aa4.82□□□□□ -1.64
CDKL5-207ENST00000624700 PBX1P40424 430 aa4.82□□□□□ -1.64
CDKL5-207ENST00000624700 PPM1FP49593 454 aaPredicted RBP4.82□□□□□ -1.64
CDKL5-207ENST00000624700 DIO1P49895 249 aa4.82□□□□□ -1.64
CDKL5-207ENST00000624700 ARL4CP56559 192 aa4.82□□□□□ -1.64
CDKL5-207ENST00000624700 AP2B1P63010 937 aa4.82□□□□□ -1.64
CDKL5-207ENST00000624700 PRKG1Q13976 671 aa4.82□□□□□ -1.64
CDKL5-207ENST00000624700 INO80DQ53TQ3 878 aaPredicted RBP4.82□□□□□ -1.64
CDKL5-207ENST00000624700 NFRKBQ6P4R8 1299 aa4.82□□□□□ -1.64
CDKL5-207ENST00000624700 TRIM72Q6ZMU5 477 aa4.82□□□□□ -1.64
CDKL5-207ENST00000624700 KRT27Q7Z3Y8 459 aa4.82□□□□□ -1.64
CDKL5-207ENST00000624700 TRABD2AQ86V40 505 aa4.82□□□□□ -1.64
CDKL5-207ENST00000624700 SMAP1Q8IYB5 467 aaPredicted RBP4.82□□□□□ -1.64
CDKL5-207ENST00000624700 WDYHV1Q96HA8 205 aa4.82□□□□□ -1.64
CDKL5-207ENST00000624700 FAR2Q96K12 515 aa4.82□□□□□ -1.64
CDKL5-207ENST00000624700 SCLT1Q96NL6 688 aa4.82□□□□□ -1.64
CDKL5-207ENST00000624700 MAGEH1Q9H213 219 aa4.82□□□□□ -1.64
CDKL5-207ENST00000624700 EPS8L2Q9H6S3 715 aa4.82□□□□□ -1.64
CDKL5-207ENST00000624700 RIOX1Q9H6W3 641 aa4.82□□□□□ -1.64
CDKL5-207ENST00000624700 CPNE5Q9HCH3 593 aa4.82□□□□□ -1.64
CDKL5-207ENST00000624700 SAYSD1Q9NPB0 183 aa4.82□□□□□ -1.64
CDKL5-207ENST00000624700 TMLHEQ9NVH6 421 aa4.82□□□□□ -1.64
CDKL5-207ENST00000624700 ZNHIT2Q9UHR6 403 aa4.82□□□□□ -1.64
CDKL5-207ENST00000624700 MORC2Q9Y6X9 1032 aaPredicted RBP4.82□□□□□ -1.64
CDKL5-207ENST00000624700 TARM1B6A8C7 271 aa4.81□□□□□ -1.64
CDKL5-207ENST00000624700 POC1B-GALNT4F8VUJ3 575 aa4.81□□□□□ -1.64
CDKL5-207ENST00000624700 H3BNC9 293 aa4.81□□□□□ -1.64
CDKL5-207ENST00000624700 PCDH17O14917 1159 aa4.81□□□□□ -1.64
CDKL5-207ENST00000624700 IRAK2O43187 625 aa4.81□□□□□ -1.64
CDKL5-207ENST00000624700 DHHO43323 396 aa4.81□□□□□ -1.64
CDKL5-207ENST00000624700 C1RP00736 705 aa4.81□□□□□ -1.64
CDKL5-207ENST00000624700 DRD1P21728 446 aa4.81□□□□□ -1.64
CDKL5-207ENST00000624700 MCM5P33992 734 aa4.81□□□□□ -1.64
CDKL5-207ENST00000624700 MRPS21P82921 87 aaKnown RBP4.81□□□□□ -1.64
CDKL5-207ENST00000624700 LMAN2Q12907 356 aa4.81□□□□□ -1.64
CDKL5-207ENST00000624700 BFSP2Q13515 415 aa4.81□□□□□ -1.64
CDKL5-207ENST00000624700 ACSM6Q6P461 480 aa4.81□□□□□ -1.64
CDKL5-207ENST00000624700 VSTM1Q6UX27 236 aa4.81□□□□□ -1.64
CDKL5-207ENST00000624700 DPY19L3Q6ZPD9 716 aa4.81□□□□□ -1.64
CDKL5-207ENST00000624700 PRIMA1Q86XR5 153 aa4.81□□□□□ -1.64
CDKL5-207ENST00000624700 ZNF354CQ86Y25 554 aa4.81□□□□□ -1.64
CDKL5-207ENST00000624700 ANKRD18AQ8IVF6 992 aa4.81□□□□□ -1.64
CDKL5-207ENST00000624700 SLC44A2Q8IWA5 706 aaPredicted RBP4.81□□□□□ -1.64
CDKL5-207ENST00000624700 GALNT4Q8N4A0 578 aa4.81□□□□□ -1.64
CDKL5-207ENST00000624700 OR52L2PQ8NGH6 319 aa4.81□□□□□ -1.64
CDKL5-207ENST00000624700 CPT1BQ92523 772 aa4.81□□□□□ -1.64
CDKL5-207ENST00000624700 SARAFQ96BY9 339 aa4.81□□□□□ -1.64
CDKL5-207ENST00000624700 HS6ST2Q96MM7 605 aa4.81□□□□□ -1.64
CDKL5-207ENST00000624700 DDX23Q9BUQ8 820 aaKnown RBP4.81□□□□□ -1.64
CDKL5-207ENST00000624700 RNF26Q9BY78 433 aaPredicted RBP4.81□□□□□ -1.64
CDKL5-207ENST00000624700 CIPCQ9C0C6 399 aa4.81□□□□□ -1.64
CDKL5-207ENST00000624700 PABPC3Q9H361 631 aaKnown RBP4.81□□□□□ -1.64
CDKL5-207ENST00000624700 WDR26Q9H7D7 661 aa4.81□□□□□ -1.64
CDKL5-207ENST00000624700 USP29Q9HBJ7 922 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms