RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 STT3AP46977 705 aa5.17□□□□□ -1.58
BRCA1-229ENST00000621897 JAK3P52333 1124 aa5.17□□□□□ -1.58
BRCA1-229ENST00000621897 WDR5P61964 334 aaKnown RBP5.17□□□□□ -1.58
BRCA1-229ENST00000621897 KCNJ12Q14500 433 aa5.17□□□□□ -1.58
BRCA1-229ENST00000621897 FAXCQ5TGI0 409 aa5.17□□□□□ -1.58
BRCA1-229ENST00000621897 RAP1GAP2Q684P5 730 aa5.17□□□□□ -1.58
BRCA1-229ENST00000621897 AWAT2Q6E213 333 aa5.17□□□□□ -1.58
BRCA1-229ENST00000621897 TECPR1Q7Z6L1 1165 aa5.17□□□□□ -1.58
BRCA1-229ENST00000621897 PIP4P1Q86T03 277 aa5.17□□□□□ -1.58
BRCA1-229ENST00000621897 CCDC28AQ8IWP9 274 aa5.17□□□□□ -1.58
BRCA1-229ENST00000621897 WIPF2Q8TF74 440 aaPredicted RBP5.17□□□□□ -1.58
BRCA1-229ENST00000621897 NAA15Q9BXJ9 866 aaKnown RBP5.17□□□□□ -1.58
BRCA1-229ENST00000621897 ADGRE3Q9BY15 652 aa5.17□□□□□ -1.58
BRCA1-229ENST00000621897 NUAK2Q9H093 628 aa5.17□□□□□ -1.58
BRCA1-229ENST00000621897 ZBTB26Q9HCK0 441 aa5.17□□□□□ -1.58
BRCA1-229ENST00000621897 AGO4Q9HCK5 861 aaKnown RBP5.17□□□□□ -1.58
BRCA1-229ENST00000621897 MYO1AQ9UBC5 1043 aa5.17□□□□□ -1.58
BRCA1-229ENST00000621897 LY6G6EA0A0G2JKS1 128 aa5.16□□□□□ -1.58
BRCA1-229ENST00000621897 SOCS2O14508 198 aa5.16□□□□□ -1.58
BRCA1-229ENST00000621897 APOL1O14791 398 aa5.16□□□□□ -1.58
BRCA1-229ENST00000621897 PMM2O15305 246 aa5.16□□□□□ -1.58
BRCA1-229ENST00000621897 TLR2O60603 784 aa5.16□□□□□ -1.58
BRCA1-229ENST00000621897 NDST3O95803 873 aa5.16□□□□□ -1.58
BRCA1-229ENST00000621897 CTSAP10619 480 aa5.16□□□□□ -1.58
BRCA1-229ENST00000621897 MYL4P12829 197 aa5.16□□□□□ -1.58
BRCA1-229ENST00000621897 DRD1P21728 446 aa5.16□□□□□ -1.58
BRCA1-229ENST00000621897 GABRB3P28472 473 aa5.16□□□□□ -1.58
BRCA1-229ENST00000621897 TACR3P29371 465 aa5.16□□□□□ -1.58
BRCA1-229ENST00000621897 SAFBQ15424 915 aaKnown RBP eCLIP5.16□□□□□ -1.58
BRCA1-229ENST00000621897 PFKFB3Q16875 520 aaPredicted RBP5.16□□□□□ -1.58
BRCA1-229ENST00000621897 ZNF260Q3ZCT1 412 aa5.16□□□□□ -1.58
BRCA1-229ENST00000621897 IRF2BP2Q7Z5L9 587 aa5.16□□□□□ -1.58
BRCA1-229ENST00000621897 C16orf71Q8IYS4 520 aaPredicted RBP5.16□□□□□ -1.58
BRCA1-229ENST00000621897 HMCESQ96FZ2 354 aa5.16□□□□□ -1.58
BRCA1-229ENST00000621897 MAGEB5Q9BZ81 275 aa5.16□□□□□ -1.58
BRCA1-229ENST00000621897 TMEM8AQ9HCN3 771 aa5.16□□□□□ -1.58
BRCA1-229ENST00000621897 ABHD10Q9NUJ1 306 aa5.16□□□□□ -1.58
BRCA1-229ENST00000621897 PI4KBQ9UBF8 816 aa5.16□□□□□ -1.58
BRCA1-229ENST00000621897 ZMYND8Q9ULU4 1186 aaPredicted RBP5.16□□□□□ -1.58
BRCA1-229ENST00000621897 SPATA31A1Q5TZJ5 1347 aa5.16□□□□□ -1.58
BRCA1-229ENST00000621897 INPPL1O15357 1258 aa5.15□□□□□ -1.59
BRCA1-229ENST00000621897 CCNT2O60583 730 aaKnown RBP5.15□□□□□ -1.59
BRCA1-229ENST00000621897 CNOT3O75175 753 aaKnown RBP5.15□□□□□ -1.59
BRCA1-229ENST00000621897 COQ9O75208 318 aa5.15□□□□□ -1.59
BRCA1-229ENST00000621897 NTN1O95631 604 aa5.15□□□□□ -1.59
BRCA1-229ENST00000621897 IDUAP35475 653 aa5.15□□□□□ -1.59
BRCA1-229ENST00000621897 DGKQP52824 942 aa5.15□□□□□ -1.59
BRCA1-229ENST00000621897 ID2Q02363 134 aa5.15□□□□□ -1.59
BRCA1-229ENST00000621897 GAB1Q13480 694 aa5.15□□□□□ -1.59
BRCA1-229ENST00000621897 PMS2P11Q13670 270 aa5.15□□□□□ -1.59
BRCA1-229ENST00000621897 LAMB3Q13751 1172 aa5.15□□□□□ -1.59
BRCA1-229ENST00000621897 TMEM196Q5HYL7 178 aa5.15□□□□□ -1.59
BRCA1-229ENST00000621897 FAM90A2PQ658T7 463 aa5.15□□□□□ -1.59
BRCA1-229ENST00000621897 ANO7Q6IWH7 933 aa5.15□□□□□ -1.59
BRCA1-229ENST00000621897 MRNIPQ6NTE8 343 aa5.15□□□□□ -1.59
BRCA1-229ENST00000621897 DEF8Q6ZN54 512 aa5.15□□□□□ -1.59
BRCA1-229ENST00000621897 MRPL10Q7Z7H8 261 aaKnown RBP5.15□□□□□ -1.59
BRCA1-229ENST00000621897 ABHD5Q8WTS1 349 aa5.15□□□□□ -1.59
BRCA1-229ENST00000621897 C8orf48Q96LL4 319 aa5.15□□□□□ -1.59
BRCA1-229ENST00000621897 GDF15Q99988 308 aa5.15□□□□□ -1.59
BRCA1-229ENST00000621897 PCDHAC1Q9H158 963 aa5.15□□□□□ -1.59
BRCA1-229ENST00000621897 ARL8BQ9NVJ2 186 aa5.15□□□□□ -1.59
BRCA1-229ENST00000621897 HEY2Q9UBP5 337 aa5.15□□□□□ -1.59
BRCA1-229ENST00000621897 MAFFQ9ULX9 164 aa5.15□□□□□ -1.59
BRCA1-229ENST00000621897 MAN2B2Q9Y2E5 1009 aa5.15□□□□□ -1.59
BRCA1-229ENST00000621897 ZMYM2Q9UBW7 1377 aa5.15□□□□□ -1.59
BRCA1-229ENST00000621897 TTC3P53804 2025 aa5.14□□□□□ -1.59
BRCA1-229ENST00000621897 NCK2O43639 380 aa5.14□□□□□ -1.59
BRCA1-229ENST00000621897 MYL3P08590 195 aa5.14□□□□□ -1.59
BRCA1-229ENST00000621897 HARSP12081 509 aaKnown RBP5.14□□□□□ -1.59
BRCA1-229ENST00000621897 TRIM27P14373 513 aa5.14□□□□□ -1.59
BRCA1-229ENST00000621897 PECAM1P16284 738 aaPredicted RBP5.14□□□□□ -1.59
BRCA1-229ENST00000621897 SLC5A2P31639 672 aa5.14□□□□□ -1.59
BRCA1-229ENST00000621897 CCT4P50991 539 aaKnown RBP5.14□□□□□ -1.59
BRCA1-229ENST00000621897 PLCD1P51178 756 aa5.14□□□□□ -1.59
BRCA1-229ENST00000621897 RPS13P62277 151 aaKnown RBP5.14□□□□□ -1.59
BRCA1-229ENST00000621897 BFSP2Q13515 415 aa5.14□□□□□ -1.59
BRCA1-229ENST00000621897 ARHGAP15Q53QZ3 475 aa5.14□□□□□ -1.59
BRCA1-229ENST00000621897 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.14□□□□□ -1.59
BRCA1-229ENST00000621897 BEND5Q7L4P6 421 aa5.14□□□□□ -1.59
BRCA1-229ENST00000621897 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.14□□□□□ -1.59
BRCA1-229ENST00000621897 FCRL5Q96RD9 977 aa5.14□□□□□ -1.59
BRCA1-229ENST00000621897 SCNM1Q9BWG6 230 aa5.14□□□□□ -1.59
BRCA1-229ENST00000621897 COLEC11Q9BWP8 271 aa5.14□□□□□ -1.59
BRCA1-229ENST00000621897 GATA5Q9BWX5 397 aaPredicted RBP5.14□□□□□ -1.59
BRCA1-229ENST00000621897 TMOD4Q9NZQ9 345 aa5.14□□□□□ -1.59
BRCA1-229ENST00000621897 HEMK1Q9Y5R4 338 aaPredicted RBP5.14□□□□□ -1.59
BRCA1-229ENST00000621897 SIRT4Q9Y6E7 314 aaPredicted RBP5.14□□□□□ -1.59
BRCA1-229ENST00000621897 C2CD4BA6NLJ0 364 aa5.13□□□□□ -1.59
BRCA1-229ENST00000621897 PRYO14603 147 aa5.13□□□□□ -1.59
BRCA1-229ENST00000621897 PLAUP00749 431 aa5.13□□□□□ -1.59
BRCA1-229ENST00000621897 ITGB6P18564 788 aa5.13□□□□□ -1.59
BRCA1-229ENST00000621897 SRSF1Q07955 248 aaKnown RBP eCLIP5.13□□□□□ -1.59
BRCA1-229ENST00000621897 IFIT5Q13325 482 aaKnown RBP5.13□□□□□ -1.59
BRCA1-229ENST00000621897 SLC9C1Q4G0N8 1177 aa5.13□□□□□ -1.59
BRCA1-229ENST00000621897 HIBCHQ6NVY1 386 aaPredicted RBP5.13□□□□□ -1.59
BRCA1-229ENST00000621897 USP17L6PQ6QN14 398 aa5.13□□□□□ -1.59
BRCA1-229ENST00000621897 GLIS1Q8NBF1 620 aa5.13□□□□□ -1.59
BRCA1-229ENST00000621897 CCDC150Q8NCX0 1101 aa5.13□□□□□ -1.59
BRCA1-229ENST00000621897 ZNF548Q8NEK5 533 aaPredicted RBP5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms