RNA–Protein interactions for RNA: ENST00000621453.4

FMR1-219, Transcript of fragile X mental retardation 1, humanhuman

TSL 1 (best) BASIC

Gene FMR1, Length 1,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-219ENST00000621453 SHOC2Q9UQ13 582 aa28.88■■■□□ 2.21
FMR1-219ENST00000621453 COL4A4P53420 1690 aaPredicted RBP28.88■■■□□ 2.21
FMR1-219ENST00000621453 ALDH2P05091 517 aa28.87■■■□□ 2.21
FMR1-219ENST00000621453 GOT1P17174 413 aa28.87■■■□□ 2.21
FMR1-219ENST00000621453 GRIK1P39086 918 aa28.87■■■□□ 2.21
FMR1-219ENST00000621453 AIF1P55008 147 aa28.87■■■□□ 2.21
FMR1-219ENST00000621453 VARS2Q5ST30 1063 aaKnown RBP28.87■■■□□ 2.21
FMR1-219ENST00000621453 RELL1Q8IUW5 271 aa28.87■■■□□ 2.21
FMR1-219ENST00000621453 ADAM32Q8TC27 787 aa28.87■■■□□ 2.21
FMR1-219ENST00000621453 COLEC11Q9BWP8 271 aa28.87■■■□□ 2.21
FMR1-219ENST00000621453 WDR6Q9NNW5 1121 aaKnown RBP28.87■■■□□ 2.21
FMR1-219ENST00000621453 CTCFP49711 727 aaPredicted RBP28.87■■■□□ 2.21
FMR1-219ENST00000621453 B4GALNT4Q76KP1 1039 aa28.87■■■□□ 2.21
FMR1-219ENST00000621453 HOOK3Q86VS8 718 aa28.87■■■□□ 2.21
FMR1-219ENST00000621453 TOX2Q96NM4 488 aa28.87■■■□□ 2.21
FMR1-219ENST00000621453 MRPL9Q9BYD2 267 aaKnown RBP28.87■■■□□ 2.21
FMR1-219ENST00000621453 CRISPLD2Q9H0B8 497 aa28.87■■■□□ 2.21
FMR1-219ENST00000621453 FARP1Q9Y4F1 1045 aaPredicted RBP28.87■■■□□ 2.21
FMR1-219ENST00000621453 FNDC1Q4ZHG4 1894 aaPredicted RBP28.86■■■□□ 2.21
FMR1-219ENST00000621453 CFAP69A5D8W1 941 aa28.86■■■□□ 2.21
FMR1-219ENST00000621453 TRIM60Q495X7 471 aa28.86■■■□□ 2.21
FMR1-219ENST00000621453 EFHC2Q5JST6 749 aa28.86■■■□□ 2.21
FMR1-219ENST00000621453 AGBL2Q5U5Z8 902 aa28.86■■■□□ 2.21
FMR1-219ENST00000621453 BSPRYQ5W0U4 402 aa28.86■■■□□ 2.21
FMR1-219ENST00000621453 EDEM1Q92611 657 aa28.86■■■□□ 2.21
FMR1-219ENST00000621453 NTAN1Q96AB6 310 aa28.86■■■□□ 2.21
FMR1-219ENST00000621453 RBM15Q96T37 977 aaKnown RBP eCLIP28.86■■■□□ 2.21
FMR1-219ENST00000621453 LRRC4CQ9HCJ2 640 aa28.86■■■□□ 2.21
FMR1-219ENST00000621453 TMPRSS4Q9NRS4 437 aa28.86■■■□□ 2.21
FMR1-219ENST00000621453 MICAL3Q7RTP6 2002 aa28.85■■■□□ 2.21
FMR1-219ENST00000621453 TTC4O95801 387 aa28.85■■■□□ 2.21
FMR1-219ENST00000621453 NR2C2P49116 596 aa28.85■■■□□ 2.21
FMR1-219ENST00000621453 SLC11A1P49279 550 aa28.85■■■□□ 2.21
FMR1-219ENST00000621453 SLC5A3P53794 718 aa28.85■■■□□ 2.21
FMR1-219ENST00000621453 TLE2Q04725 743 aa28.85■■■□□ 2.21
FMR1-219ENST00000621453 FAM171A1Q5VUB5 890 aa28.85■■■□□ 2.21
FMR1-219ENST00000621453 PPIL6Q8IXY8 311 aa28.85■■■□□ 2.21
FMR1-219ENST00000621453 SCAMP5Q8TAC9 235 aa28.85■■■□□ 2.21
FMR1-219ENST00000621453 UHMK1Q8TAS1 419 aaKnown RBP28.85■■■□□ 2.21
FMR1-219ENST00000621453 PRDM16Q9HAZ2 1276 aa28.85■■■□□ 2.21
FMR1-219ENST00000621453 USP29Q9HBJ7 922 aa28.85■■■□□ 2.21
FMR1-219ENST00000621453 DDIT4Q9NX09 232 aa28.85■■■□□ 2.21
FMR1-219ENST00000621453 MARCH5Q9NX47 278 aa28.85■■■□□ 2.21
FMR1-219ENST00000621453 ABI2Q9NYB9 513 aaPredicted RBP28.85■■■□□ 2.21
FMR1-219ENST00000621453 ZNF638Q14966 1978 aaKnown RBP28.85■■■□□ 2.21
FMR1-219ENST00000621453 BCLAF3A2AJT9 711 aaKnown RBP28.85■■■□□ 2.21
FMR1-219ENST00000621453 ACSL3O95573 720 aa28.85■■■□□ 2.21
FMR1-219ENST00000621453 F9P00740 461 aa28.85■■■□□ 2.21
FMR1-219ENST00000621453 AMPD1P23109 780 aa28.85■■■□□ 2.21
FMR1-219ENST00000621453 CYP2C18P33260 490 aa28.85■■■□□ 2.21
FMR1-219ENST00000621453 ADRA1BP35368 520 aa28.85■■■□□ 2.21
FMR1-219ENST00000621453 NFE2Q16621 373 aaPredicted RBP28.85■■■□□ 2.21
FMR1-219ENST00000621453 NCBP2-AS2Q69YL0 99 aa28.85■■■□□ 2.21
FMR1-219ENST00000621453 CEP57Q86XR8 500 aa28.85■■■□□ 2.21
FMR1-219ENST00000621453 RNF139Q8WU17 664 aa28.85■■■□□ 2.21
FMR1-219ENST00000621453 CPT1BQ92523 772 aa28.85■■■□□ 2.21
FMR1-219ENST00000621453 PRCCQ92733 491 aaPredicted RBP28.85■■■□□ 2.21
FMR1-219ENST00000621453 FUBP3Q96I24 572 aaKnown RBP eCLIP28.85■■■□□ 2.21
FMR1-219ENST00000621453 TRIM62Q9BVG3 475 aa28.85■■■□□ 2.21
FMR1-219ENST00000621453 GPR62Q9BZJ7 368 aa28.85■■■□□ 2.21
FMR1-219ENST00000621453 NINJ2Q9NZG7 142 aa28.85■■■□□ 2.21
FMR1-219ENST00000621453 HCSTQ9UBK5 93 aa28.85■■■□□ 2.21
FMR1-219ENST00000621453 TBKBP1A7MCY6 615 aa28.84■■■□□ 2.21
FMR1-219ENST00000621453 H3BRJ5 948 aa28.84■■■□□ 2.21
FMR1-219ENST00000621453 TNFRSF10BO14763 440 aa28.84■■■□□ 2.21
FMR1-219ENST00000621453 MAP3K6O95382 1288 aa28.84■■■□□ 2.21
FMR1-219ENST00000621453 GBE1Q04446 702 aa28.84■■■□□ 2.21
FMR1-219ENST00000621453 MRPL58Q14197 206 aaKnown RBP28.84■■■□□ 2.21
FMR1-219ENST00000621453 KYNUQ16719 465 aa28.84■■■□□ 2.21
FMR1-219ENST00000621453 DEFB128Q7Z7B8 93 aa28.84■■■□□ 2.21
FMR1-219ENST00000621453 TMEM109Q9BVC6 243 aa28.84■■■□□ 2.21
FMR1-219ENST00000621453 WBP1LQ9NX94 342 aa28.84■■■□□ 2.21
FMR1-219ENST00000621453 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP28.84■■■□□ 2.21
FMR1-219ENST00000621453 KCNN4O15554 427 aa28.83■■■□□ 2.21
FMR1-219ENST00000621453 RBL1P28749 1068 aa28.83■■■□□ 2.21
FMR1-219ENST00000621453 NRLP54845 237 aa28.83■■■□□ 2.21
FMR1-219ENST00000621453 SCAPQ12770 1279 aa28.83■■■□□ 2.21
FMR1-219ENST00000621453 SLC10A2Q12908 348 aaPredicted RBP28.83■■■□□ 2.21
FMR1-219ENST00000621453 XRCC4Q13426 336 aa28.83■■■□□ 2.21
FMR1-219ENST00000621453 CTXN3Q4LDR2 81 aa28.83■■■□□ 2.21
FMR1-219ENST00000621453 BEND5Q7L4P6 421 aa28.83■■■□□ 2.21
FMR1-219ENST00000621453 CROCCP2Q86T23 111 aa28.83■■■□□ 2.21
FMR1-219ENST00000621453 RTP4Q96DX8 246 aa28.83■■■□□ 2.21
FMR1-219ENST00000621453 TMEM175Q9BSA9 504 aa28.83■■■□□ 2.21
FMR1-219ENST00000621453 BCCIPQ9P287 314 aaKnown RBP eCLIP28.83■■■□□ 2.21
FMR1-219ENST00000621453 FBXW11Q9UKB1 542 aa28.83■■■□□ 2.21
FMR1-219ENST00000621453 ACTN2P35609 894 aa28.83■■■□□ 2.2
FMR1-219ENST00000621453 C1orf53Q5VUE5 145 aa28.83■■■□□ 2.2
FMR1-219ENST00000621453 ZNF280DQ6N043 979 aa28.83■■■□□ 2.2
FMR1-219ENST00000621453 CDKL3Q8IVW4 592 aaPredicted RBP28.83■■■□□ 2.2
FMR1-219ENST00000621453 SCN4BQ8IWT1 228 aa28.83■■■□□ 2.2
FMR1-219ENST00000621453 NAT8LQ8N9F0 302 aa28.83■■■□□ 2.2
FMR1-219ENST00000621453 ARHGEF4Q9NR80 690 aa28.83■■■□□ 2.2
FMR1-219ENST00000621453 ETNK2Q9NVF9 386 aa28.83■■■□□ 2.2
FMR1-219ENST00000621453 SF3B1O75533 1304 aaKnown RBP eCLIP28.82■■■□□ 2.25e-10■■■■■ 55.1
FMR1-219ENST00000621453 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP28.82■■■□□ 2.2
FMR1-219ENST00000621453 CREB3O43889 395 aa28.82■■■□□ 2.2
FMR1-219ENST00000621453 MAGEA4P43358 317 aa28.82■■■□□ 2.2
FMR1-219ENST00000621453 LMAN1P49257 510 aa28.82■■■□□ 2.2
FMR1-219ENST00000621453 IFRD2Q12894 506 aaPredicted RBP28.82■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms