RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 PPANQ9NQ55 473 aaKnown RBP10.31□□□□□ -0.76
VTA1-205ENST00000620996 RGS18Q9NS28 235 aa10.31□□□□□ -0.76
VTA1-205ENST00000620996 CTNNAL1Q9UBT7 734 aa10.31□□□□□ -0.76
VTA1-205ENST00000620996 XPO7Q9UIA9 1087 aaKnown RBP10.31□□□□□ -0.76
VTA1-205ENST00000620996 NR2E3Q9Y5X4 410 aa10.31□□□□□ -0.76
VTA1-205ENST00000620996 THSD7BQ9C0I4 1608 aa10.31□□□□□ -0.76
VTA1-205ENST00000620996 B4GALT3O60512 393 aa10.31□□□□□ -0.76
VTA1-205ENST00000620996 UPP2O95045 317 aa10.31□□□□□ -0.76
VTA1-205ENST00000620996 TTC4O95801 387 aa10.31□□□□□ -0.76
VTA1-205ENST00000620996 NUDT17P0C025 328 aa10.31□□□□□ -0.76
VTA1-205ENST00000620996 SELPP16109 830 aa10.31□□□□□ -0.76
VTA1-205ENST00000620996 L1CAMP32004 1257 aa10.31□□□□□ -0.76
VTA1-205ENST00000620996 NOS2P35228 1153 aa10.31□□□□□ -0.76
VTA1-205ENST00000620996 PBX3P40426 434 aa10.31□□□□□ -0.76
VTA1-205ENST00000620996 NOMO1Q15155 1222 aa10.31□□□□□ -0.76
VTA1-205ENST00000620996 MTFR1Q15390 333 aa10.31□□□□□ -0.76
VTA1-205ENST00000620996 EFHC2Q5JST6 749 aa10.31□□□□□ -0.76
VTA1-205ENST00000620996 SDHAF4Q5VUM1 108 aa10.31□□□□□ -0.76
VTA1-205ENST00000620996 DEFB128Q7Z7B8 93 aa10.31□□□□□ -0.76
VTA1-205ENST00000620996 CCDC13Q8IYE1 715 aa10.31□□□□□ -0.76
VTA1-205ENST00000620996 PQLC3Q8N755 202 aa10.31□□□□□ -0.76
VTA1-205ENST00000620996 CCNYQ8ND76 341 aa10.31□□□□□ -0.76
VTA1-205ENST00000620996 ZMIZ2Q8NF64 920 aa10.31□□□□□ -0.76
VTA1-205ENST00000620996 MGARPQ8TDB4 240 aa10.31□□□□□ -0.76
VTA1-205ENST00000620996 TEKT4Q8WW24 435 aa10.31□□□□□ -0.76
VTA1-205ENST00000620996 LINC01599Q8WXQ3 324 aa10.31□□□□□ -0.76
VTA1-205ENST00000620996 TSEN34Q9BSV6 310 aaKnown RBP10.31□□□□□ -0.76
VTA1-205ENST00000620996 RAB6BQ9NRW1 208 aa10.31□□□□□ -0.76
VTA1-205ENST00000620996 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.31□□□□□ -0.762e-6■■■□□ 17.4
VTA1-205ENST00000620996 DSEQ9UL01 958 aa10.31□□□□□ -0.76
VTA1-205ENST00000620996 PCDHB7Q9Y5E2 793 aa10.31□□□□□ -0.76
VTA1-205ENST00000620996 FOXO6A8MYZ6 492 aa10.31□□□□□ -0.76
VTA1-205ENST00000620996 MDM4O15151 490 aa10.31□□□□□ -0.76
VTA1-205ENST00000620996 GNRH1P01148 92 aa10.31□□□□□ -0.76
VTA1-205ENST00000620996 LTFP02788 710 aa10.31□□□□□ -0.76
VTA1-205ENST00000620996 IL4RP24394 825 aa10.31□□□□□ -0.76
VTA1-205ENST00000620996 DAOAP59103 153 aa10.31□□□□□ -0.76
VTA1-205ENST00000620996 PPP2R2AP63151 447 aa10.31□□□□□ -0.76
VTA1-205ENST00000620996 MORF4L2Q15014 288 aa10.31□□□□□ -0.76
VTA1-205ENST00000620996 HIF1AQ16665 826 aa10.31□□□□□ -0.76
VTA1-205ENST00000620996 FAM26DQ5JW98 314 aa10.31□□□□□ -0.76
VTA1-205ENST00000620996 C6orf118Q5T5N4 469 aa10.31□□□□□ -0.76
VTA1-205ENST00000620996 LRRTM3Q86VH5 581 aa10.31□□□□□ -0.76
VTA1-205ENST00000620996 SCAMP5Q8TAC9 235 aa10.31□□□□□ -0.76
VTA1-205ENST00000620996 CCDC110Q8TBZ0 833 aa10.31□□□□□ -0.76
VTA1-205ENST00000620996 MDM1Q8TC05 714 aa10.31□□□□□ -0.76
VTA1-205ENST00000620996 CSPG4P5Q96PW8 444 aa10.31□□□□□ -0.76
VTA1-205ENST00000620996 RTP3Q9BQQ7 232 aa10.31□□□□□ -0.76
VTA1-205ENST00000620996 CCDC77Q9BR77 488 aa10.31□□□□□ -0.76
VTA1-205ENST00000620996 CYLDQ9NQC7 956 aa10.31□□□□□ -0.76
VTA1-205ENST00000620996 PIGVQ9NUD9 493 aa10.31□□□□□ -0.76
VTA1-205ENST00000620996 TBC1D13Q9NVG8 400 aa10.31□□□□□ -0.76
VTA1-205ENST00000620996 PSD3Q9NYI0 1048 aa10.31□□□□□ -0.76
VTA1-205ENST00000620996 CASP8AP2Q9UKL3 1982 aa10.3□□□□□ -0.76
VTA1-205ENST00000620996 PDCD11Q14690 1871 aaKnown RBP10.3□□□□□ -0.76
VTA1-205ENST00000620996 C9IYK1 514 aa10.3□□□□□ -0.76
VTA1-205ENST00000620996 NT5C1B-RDH14C9J2C7 533 aa10.3□□□□□ -0.76
VTA1-205ENST00000620996 FBXO21O94952 628 aa10.3□□□□□ -0.76
VTA1-205ENST00000620996 IRAK1P51617 712 aa10.3□□□□□ -0.76
VTA1-205ENST00000620996 BFSP2Q13515 415 aa10.3□□□□□ -0.76
VTA1-205ENST00000620996 RNASEH2BQ5TBB1 312 aaKnown RBP10.3□□□□□ -0.76
VTA1-205ENST00000620996 AGBL2Q5U5Z8 902 aa10.3□□□□□ -0.76
VTA1-205ENST00000620996 KDM7AQ6ZMT4 941 aa10.3□□□□□ -0.76
VTA1-205ENST00000620996 PPIL6Q8IXY8 311 aa10.3□□□□□ -0.76
VTA1-205ENST00000620996 UROC1Q96N76 676 aa10.3□□□□□ -0.76
VTA1-205ENST00000620996 ACBD6Q9BR61 282 aa10.3□□□□□ -0.76
VTA1-205ENST00000620996 ZNF670Q9BS34 389 aa10.3□□□□□ -0.76
VTA1-205ENST00000620996 CEP41Q9BYV8 373 aa10.3□□□□□ -0.76
VTA1-205ENST00000620996 FRMD8P1Q9BZ68 369 aaPredicted RBP10.3□□□□□ -0.76
VTA1-205ENST00000620996 KCNK9Q9NPC2 374 aa10.3□□□□□ -0.76
VTA1-205ENST00000620996 DMAP1Q9NPF5 467 aaPredicted RBP10.3□□□□□ -0.76
VTA1-205ENST00000620996 ETNK2Q9NVF9 386 aa10.3□□□□□ -0.76
VTA1-205ENST00000620996 HCSTQ9UBK5 93 aa10.3□□□□□ -0.76
VTA1-205ENST00000620996 NUDT5Q9UKK9 219 aa10.3□□□□□ -0.76
VTA1-205ENST00000620996 EXOC1LA0A1B0GW35 172 aa10.3□□□□□ -0.76
VTA1-205ENST00000620996 TCRBV7S3A2A0A539 114 aa10.3□□□□□ -0.76
VTA1-205ENST00000620996 E7EVH7 732 aa10.3□□□□□ -0.76
VTA1-205ENST00000620996 PIAS1O75925 651 aa10.3□□□□□ -0.76
VTA1-205ENST00000620996 TGM2P21980 687 aa10.3□□□□□ -0.76
VTA1-205ENST00000620996 ARL4CP56559 192 aa10.3□□□□□ -0.76
VTA1-205ENST00000620996 AP1B1Q10567 949 aa10.3□□□□□ -0.76
VTA1-205ENST00000620996 SF3A3Q12874 501 aaKnown RBP eCLIP10.3□□□□□ -0.76
VTA1-205ENST00000620996 TMED2Q15363 201 aa10.3□□□□□ -0.76
VTA1-205ENST00000620996 TAZQ16635 292 aa10.3□□□□□ -0.76
VTA1-205ENST00000620996 SPDYCQ5MJ68 293 aa10.3□□□□□ -0.76
VTA1-205ENST00000620996 STRADAQ7RTN6 431 aa10.3□□□□□ -0.76
VTA1-205ENST00000620996 PCGF5Q86SE9 256 aa10.3□□□□□ -0.76
VTA1-205ENST00000620996 ZNF598Q86UK7 904 aaKnown RBP10.3□□□□□ -0.76
VTA1-205ENST00000620996 KCTD13Q8WZ19 329 aa10.3□□□□□ -0.76
VTA1-205ENST00000620996 SNX10Q9Y5X0 201 aa10.3□□□□□ -0.76
VTA1-205ENST00000620996 H3BRJ5 948 aa10.29□□□□□ -0.76
VTA1-205ENST00000620996 EEF2KO00418 725 aaKnown RBP10.29□□□□□ -0.76
VTA1-205ENST00000620996 PEX19P40855 299 aa10.29□□□□□ -0.76
VTA1-205ENST00000620996 BCAS4Q8TDM0 211 aa10.29□□□□□ -0.76
VTA1-205ENST00000620996 PYROXD1Q8WU10 500 aa10.29□□□□□ -0.76
VTA1-205ENST00000620996 CPT1BQ92523 772 aa10.29□□□□□ -0.76
VTA1-205ENST00000620996 PRCCQ92733 491 aaPredicted RBP10.29□□□□□ -0.76
VTA1-205ENST00000620996 N4BP2L2Q92802 583 aaPredicted RBP10.29□□□□□ -0.76
VTA1-205ENST00000620996 CNGB3Q9NQW8 809 aa10.29□□□□□ -0.76
VTA1-205ENST00000620996 ARHGEF37A1IGU5 675 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms