RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 RPL5P46777 297 aaKnown RBP7.37□□□□□ -1.23
COLCA1-205ENST00000620864 NAB1Q13506 487 aa7.37□□□□□ -1.23
COLCA1-205ENST00000620864 INO80DQ53TQ3 878 aaPredicted RBP7.37□□□□□ -1.23
COLCA1-205ENST00000620864 ZNF605Q86T29 641 aa7.37□□□□□ -1.23
COLCA1-205ENST00000620864 EGFL6Q8IUX8 553 aa7.37□□□□□ -1.23
COLCA1-205ENST00000620864 DEFB123Q8N688 67 aa7.37□□□□□ -1.23
COLCA1-205ENST00000620864 ZNF784Q8NCA9 323 aaPredicted RBP7.37□□□□□ -1.23
COLCA1-205ENST00000620864 EEF1AKMT1Q8WVE0 214 aa7.37□□□□□ -1.23
COLCA1-205ENST00000620864 GLIS2Q9BZE0 524 aaPredicted RBP7.37□□□□□ -1.23
COLCA1-205ENST00000620864 PRDM16Q9HAZ2 1276 aa7.37□□□□□ -1.23
COLCA1-205ENST00000620864 TMBIM4Q9HC24 238 aa7.37□□□□□ -1.23
COLCA1-205ENST00000620864 CPA4Q9UI42 421 aa7.37□□□□□ -1.23
COLCA1-205ENST00000620864 L1RE1Q9UN81 338 aa7.37□□□□□ -1.23
COLCA1-205ENST00000620864 ABCB11O95342 1321 aa7.37□□□□□ -1.23
COLCA1-205ENST00000620864 CD2BP2O95400 341 aaKnown RBP7.37□□□□□ -1.23
COLCA1-205ENST00000620864 RARGP13631 454 aa7.37□□□□□ -1.23
COLCA1-205ENST00000620864 ALDH6A1Q02252 535 aaKnown RBP7.37□□□□□ -1.23
COLCA1-205ENST00000620864 ZSWIM7Q19AV6 140 aa7.37□□□□□ -1.23
COLCA1-205ENST00000620864 TTC23Q5W5X9 447 aa7.37□□□□□ -1.23
COLCA1-205ENST00000620864 MACC1Q6ZN28 852 aa7.37□□□□□ -1.23
COLCA1-205ENST00000620864 ADHFE1Q8IWW8 467 aa7.37□□□□□ -1.23
COLCA1-205ENST00000620864 SH2D3CQ8N5H7 860 aa7.37□□□□□ -1.23
COLCA1-205ENST00000620864 DHRSXQ8N5I4 330 aa7.37□□□□□ -1.23
COLCA1-205ENST00000620864 LATS2Q9NRM7 1088 aa7.37□□□□□ -1.23
COLCA1-205ENST00000620864 TSR3Q9UJK0 312 aaKnown RBP7.37□□□□□ -1.23
COLCA1-205ENST00000620864 H3BNX3 289 aa7.36□□□□□ -1.23
COLCA1-205ENST00000620864 RPS6KA5O75582 802 aa7.36□□□□□ -1.23
COLCA1-205ENST00000620864 HSMCR30P0CW71 290 aa7.36□□□□□ -1.23
COLCA1-205ENST00000620864 SRGNP10124 158 aa7.36□□□□□ -1.23
COLCA1-205ENST00000620864 ATP6V1B2P21281 511 aa7.36□□□□□ -1.23
COLCA1-205ENST00000620864 HSD17B3P37058 310 aa7.36□□□□□ -1.23
COLCA1-205ENST00000620864 GP5P40197 560 aa7.36□□□□□ -1.23
COLCA1-205ENST00000620864 SLC26A3P40879 764 aa7.36□□□□□ -1.23
COLCA1-205ENST00000620864 PPP3CCP48454 512 aa7.36□□□□□ -1.23
COLCA1-205ENST00000620864 MTA1Q13330 715 aa7.36□□□□□ -1.23
COLCA1-205ENST00000620864 ATP6AP1LQ52LC2 224 aa7.36□□□□□ -1.23
COLCA1-205ENST00000620864 TBCELQ5QJ74 424 aa7.36□□□□□ -1.23
COLCA1-205ENST00000620864 ANKRD40Q6AI12 368 aa7.36□□□□□ -1.23
COLCA1-205ENST00000620864 GRAMD1CQ8IYS0 662 aa7.36□□□□□ -1.23
COLCA1-205ENST00000620864 PJA1Q8NG27 643 aa7.36□□□□□ -1.23
COLCA1-205ENST00000620864 BLOC1S5Q8TDH9 187 aa7.36□□□□□ -1.23
COLCA1-205ENST00000620864 SH3RF3Q8TEJ3 882 aaPredicted RBP7.36□□□□□ -1.23
COLCA1-205ENST00000620864 BHMTQ93088 406 aa7.36□□□□□ -1.23
COLCA1-205ENST00000620864 SPON2Q9BUD6 331 aa7.36□□□□□ -1.23
COLCA1-205ENST00000620864 POLR1BQ9H9Y6 1135 aa7.36□□□□□ -1.23
COLCA1-205ENST00000620864 GDAQ9Y2T3 454 aa7.36□□□□□ -1.23
COLCA1-205ENST00000620864 SQORQ9Y6N5 450 aa7.36□□□□□ -1.23
COLCA1-205ENST00000620864 PRDM15P57071 1507 aaPredicted RBP7.36□□□□□ -1.23
COLCA1-205ENST00000620864 TCN1P20061 433 aaPredicted RBP7.36□□□□□ -1.23
COLCA1-205ENST00000620864 ATP4AP20648 1035 aa7.36□□□□□ -1.23
COLCA1-205ENST00000620864 ADD2P35612 726 aa7.36□□□□□ -1.23
COLCA1-205ENST00000620864 ZNF211Q13398 564 aaPredicted RBP7.36□□□□□ -1.23
COLCA1-205ENST00000620864 NR1D2Q14995 579 aa7.36□□□□□ -1.23
COLCA1-205ENST00000620864 PREPLQ4J6C6 727 aaPredicted RBP7.36□□□□□ -1.23
COLCA1-205ENST00000620864 AGR3Q8TD06 166 aa7.36□□□□□ -1.23
COLCA1-205ENST00000620864 DCBLD2Q96PD2 775 aa7.36□□□□□ -1.23
COLCA1-205ENST00000620864 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.36□□□□□ -1.23
COLCA1-205ENST00000620864 PCDHB6Q9Y5E3 794 aa7.36□□□□□ -1.23
COLCA1-205ENST00000620864 MDM4O15151 490 aa7.36□□□□□ -1.23
COLCA1-205ENST00000620864 NDUFB5O43674 189 aa7.36□□□□□ -1.23
COLCA1-205ENST00000620864 MPOP05164 745 aa7.36□□□□□ -1.23
COLCA1-205ENST00000620864 ADSLP30566 484 aaPredicted RBP7.36□□□□□ -1.23
COLCA1-205ENST00000620864 USP11P51784 963 aa7.36□□□□□ -1.23
COLCA1-205ENST00000620864 DNAJC3Q13217 504 aa7.36□□□□□ -1.23
COLCA1-205ENST00000620864 MTMR2Q13614 643 aa7.36□□□□□ -1.23
COLCA1-205ENST00000620864 TTLL4Q14679 1199 aa7.36□□□□□ -1.23
COLCA1-205ENST00000620864 MRNIPQ6NTE8 343 aa7.36□□□□□ -1.23
COLCA1-205ENST00000620864 HAUS6Q7Z4H7 955 aa7.36□□□□□ -1.23
COLCA1-205ENST00000620864 DEPDC4Q8N2C3 294 aa7.36□□□□□ -1.23
COLCA1-205ENST00000620864 ACOT12Q8WYK0 555 aa7.36□□□□□ -1.23
COLCA1-205ENST00000620864 DYNLL2Q96FJ2 89 aa7.36□□□□□ -1.23
COLCA1-205ENST00000620864 CRAMP1Q96RY5 1269 aa7.36□□□□□ -1.23
COLCA1-205ENST00000620864 WDR24Q96S15 920 aa7.36□□□□□ -1.23
COLCA1-205ENST00000620864 APEX2Q9UBZ4 518 aa7.36□□□□□ -1.23
COLCA1-205ENST00000620864 DBR1Q9UK59 544 aaKnown RBP7.36□□□□□ -1.23
COLCA1-205ENST00000620864 ANKRD6Q9Y2G4 727 aa7.36□□□□□ -1.23
COLCA1-205ENST00000620864 CDHR2Q9BYE9 1310 aa7.36□□□□□ -1.23
COLCA1-205ENST00000620864 DHFRP00374 187 aa7.36□□□□□ -1.23
COLCA1-205ENST00000620864 CYP21A2P08686 494 aa7.36□□□□□ -1.23
COLCA1-205ENST00000620864 NFIAQ12857 509 aa7.36□□□□□ -1.23
COLCA1-205ENST00000620864 NFYCQ13952 458 aa7.36□□□□□ -1.23
COLCA1-205ENST00000620864 ANKS6Q68DC2 871 aa7.36□□□□□ -1.23
COLCA1-205ENST00000620864 DENND1BQ6P3S1 775 aa7.36□□□□□ -1.23
COLCA1-205ENST00000620864 POLNQ7Z5Q5 900 aa7.36□□□□□ -1.23
COLCA1-205ENST00000620864 ADCK2Q7Z695 626 aa7.36□□□□□ -1.23
COLCA1-205ENST00000620864 THNSL1Q8IYQ7 743 aa7.36□□□□□ -1.23
COLCA1-205ENST00000620864 IZUMO1Q8IYV9 350 aa7.36□□□□□ -1.23
COLCA1-205ENST00000620864 C4orf33Q8N1A6 199 aa7.36□□□□□ -1.23
COLCA1-205ENST00000620864 SLC35G2Q8TBE7 412 aa7.36□□□□□ -1.23
COLCA1-205ENST00000620864 NSMCE2Q96MF7 247 aa7.36□□□□□ -1.23
COLCA1-205ENST00000620864 RHOBTB2Q9BYZ6 727 aa7.36□□□□□ -1.23
COLCA1-205ENST00000620864 JMJD4Q9H9V9 463 aa7.36□□□□□ -1.23
COLCA1-205ENST00000620864 ARHGEF40Q8TER5 1519 aa7.36□□□□□ -1.23
COLCA1-205ENST00000620864 MATN2O00339 956 aa7.36□□□□□ -1.23
COLCA1-205ENST00000620864 NCK2O43639 380 aa7.36□□□□□ -1.23
COLCA1-205ENST00000620864 SNX4O95219 450 aa7.36□□□□□ -1.23
COLCA1-205ENST00000620864 FEN1P39748 380 aaKnown RBP7.36□□□□□ -1.23
COLCA1-205ENST00000620864 BTN3A2P78410 334 aa7.36□□□□□ -1.23
COLCA1-205ENST00000620864 ENPEPQ07075 957 aa7.36□□□□□ -1.23
COLCA1-205ENST00000620864 MAPK11Q15759 364 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms