RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 LCA5Q86VQ0 697 aa7.19□□□□□ -1.26
NEDD9-216ENST00000620854 TRPM4Q8TD43 1214 aa7.19□□□□□ -1.26
NEDD9-216ENST00000620854 MZB1Q8WU39 189 aa7.19□□□□□ -1.26
NEDD9-216ENST00000620854 TFAP2BQ92481 460 aa7.19□□□□□ -1.26
NEDD9-216ENST00000620854 SPATA33Q96N06 139 aa7.19□□□□□ -1.26
NEDD9-216ENST00000620854 PGLYRP2Q96PD5 576 aa7.19□□□□□ -1.26
NEDD9-216ENST00000620854 KLHL4Q9C0H6 718 aa7.19□□□□□ -1.26
NEDD9-216ENST00000620854 POLR3FQ9H1D9 316 aaPredicted RBP7.19□□□□□ -1.26
NEDD9-216ENST00000620854 RRAGCQ9HB90 399 aa7.19□□□□□ -1.26
NEDD9-216ENST00000620854 STRIP2Q9ULQ0 834 aa7.19□□□□□ -1.26
NEDD9-216ENST00000620854 ZNF536O15090 1300 aa7.19□□□□□ -1.26
NEDD9-216ENST00000620854 GOLGA8QA0A0J9YX86 632 aa7.19□□□□□ -1.26
NEDD9-216ENST00000620854 GOLGA8OA6NCC3 632 aa7.19□□□□□ -1.26
NEDD9-216ENST00000620854 TTC36A6NLP5 189 aa7.19□□□□□ -1.26
NEDD9-216ENST00000620854 E9PBE3 544 aa7.19□□□□□ -1.26
NEDD9-216ENST00000620854 GOLGA8NF8WBI6 632 aa7.19□□□□□ -1.26
NEDD9-216ENST00000620854 AIM2O14862 343 aa7.19□□□□□ -1.26
NEDD9-216ENST00000620854 MAFGO15525 162 aa7.19□□□□□ -1.26
NEDD9-216ENST00000620854 DCXO43602 365 aa7.19□□□□□ -1.26
NEDD9-216ENST00000620854 KLHL41O60662 606 aa7.19□□□□□ -1.26
NEDD9-216ENST00000620854 ACO1P21399 889 aaKnown RBP7.19□□□□□ -1.26
NEDD9-216ENST00000620854 GARSP41250 739 aaKnown RBP7.19□□□□□ -1.26
NEDD9-216ENST00000620854 TNFSF9P41273 254 aa7.19□□□□□ -1.26
NEDD9-216ENST00000620854 GRIA1P42261 906 aa7.19□□□□□ -1.26
NEDD9-216ENST00000620854 NCKAP1LP55160 1127 aa7.19□□□□□ -1.26
NEDD9-216ENST00000620854 PDK3Q15120 406 aa7.19□□□□□ -1.26
NEDD9-216ENST00000620854 EFHC1Q5JVL4 640 aa7.19□□□□□ -1.26
NEDD9-216ENST00000620854 XRRA1Q6P2D8 792 aa7.19□□□□□ -1.26
NEDD9-216ENST00000620854 RBM44Q6ZP01 1051 aaKnown RBP7.19□□□□□ -1.26
NEDD9-216ENST00000620854 C12orf56Q8IXR9 622 aa7.19□□□□□ -1.26
NEDD9-216ENST00000620854 RYBPQ8N488 228 aaPredicted RBP7.19□□□□□ -1.26
NEDD9-216ENST00000620854 GABPB2Q8TAK5 448 aaPredicted RBP7.19□□□□□ -1.26
NEDD9-216ENST00000620854 TMC2Q8TDI7 906 aa7.19□□□□□ -1.26
NEDD9-216ENST00000620854 DEPDC1BQ8WUY9 529 aa7.19□□□□□ -1.26
NEDD9-216ENST00000620854 CDCA5Q96FF9 252 aa7.19□□□□□ -1.26
NEDD9-216ENST00000620854 MTMR12Q9C0I1 747 aa7.19□□□□□ -1.26
NEDD9-216ENST00000620854 FAM49AQ9H0Q0 323 aaPredicted RBP7.19□□□□□ -1.26
NEDD9-216ENST00000620854 XPNPEP1Q9NQW7 623 aa7.19□□□□□ -1.26
NEDD9-216ENST00000620854 PNPOQ9NVS9 261 aa7.19□□□□□ -1.26
NEDD9-216ENST00000620854 TLK1Q9UKI8 766 aa7.19□□□□□ -1.26
NEDD9-216ENST00000620854 SYNPO2Q9UMS6 1093 aa7.19□□□□□ -1.26
NEDD9-216ENST00000620854 SOX13Q9UN79 622 aa7.19□□□□□ -1.26
NEDD9-216ENST00000620854 APOBEC2Q9Y235 224 aaKnown RBP7.19□□□□□ -1.26
NEDD9-216ENST00000620854 FARP1Q9Y4F1 1045 aaPredicted RBP7.19□□□□□ -1.26
NEDD9-216ENST00000620854 HEMK1Q9Y5R4 338 aaPredicted RBP7.19□□□□□ -1.26
NEDD9-216ENST00000620854 SPDYE16A6NNV3 312 aaPredicted RBP7.19□□□□□ -1.26
NEDD9-216ENST00000620854 CXCL11O14625 94 aa7.19□□□□□ -1.26
NEDD9-216ENST00000620854 SNRPAP09012 282 aaKnown RBP7.19□□□□□ -1.26
NEDD9-216ENST00000620854 FAM200BP0CF97 657 aa7.19□□□□□ -1.26
NEDD9-216ENST00000620854 CD1EP15812 388 aa7.19□□□□□ -1.26
NEDD9-216ENST00000620854 ARL4AP40617 200 aa7.19□□□□□ -1.26
NEDD9-216ENST00000620854 ABCG1P45844 678 aa7.19□□□□□ -1.26
NEDD9-216ENST00000620854 SLC18A1P54219 525 aa7.19□□□□□ -1.26
NEDD9-216ENST00000620854 FOXD4Q12950 439 aaPredicted RBP7.19□□□□□ -1.26
NEDD9-216ENST00000620854 CYTH1Q15438 398 aa7.19□□□□□ -1.26
NEDD9-216ENST00000620854 ATG16L1Q676U5 607 aa7.19□□□□□ -1.26
NEDD9-216ENST00000620854 KRT80Q6KB66 452 aa7.19□□□□□ -1.26
NEDD9-216ENST00000620854 ENOSF1Q7L5Y1 443 aa7.19□□□□□ -1.26
NEDD9-216ENST00000620854 NET1Q7Z628 596 aaPredicted RBP7.19□□□□□ -1.26
NEDD9-216ENST00000620854 DHDDSQ86SQ9 333 aa7.19□□□□□ -1.26
NEDD9-216ENST00000620854 WDR75Q8IWA0 830 aaKnown RBP7.19□□□□□ -1.26
NEDD9-216ENST00000620854 SLC35B2Q8TB61 432 aa7.19□□□□□ -1.26
NEDD9-216ENST00000620854 NAT14Q8WUY8 206 aa7.19□□□□□ -1.26
NEDD9-216ENST00000620854 SLC44A1Q8WWI5 657 aa7.19□□□□□ -1.26
NEDD9-216ENST00000620854 NR1H4Q96RI1 486 aaPredicted RBP7.19□□□□□ -1.26
NEDD9-216ENST00000620854 FAM192AQ9GZU8 254 aa7.19□□□□□ -1.26
NEDD9-216ENST00000620854 ZFYVE28Q9HCC9 887 aa7.19□□□□□ -1.26
NEDD9-216ENST00000620854 RPL26L1Q9UNX3 145 aaKnown RBP7.19□□□□□ -1.26
NEDD9-216ENST00000620854 FZD1Q9UP38 647 aa7.19□□□□□ -1.26
NEDD9-216ENST00000620854 DRG1Q9Y295 367 aaKnown RBP7.19□□□□□ -1.26
NEDD9-216ENST00000620854 A0A088AWK7 358 aa7.18□□□□□ -1.26
NEDD9-216ENST00000620854 TTLL13PA6NNM8 815 aa7.18□□□□□ -1.26
NEDD9-216ENST00000620854 NFKBIEO00221 500 aa7.18□□□□□ -1.26
NEDD9-216ENST00000620854 NEMP1O14524 444 aa7.18□□□□□ -1.26
NEDD9-216ENST00000620854 TBC1D12O60347 775 aa7.18□□□□□ -1.26
NEDD9-216ENST00000620854 DNAJC6O75061 913 aa7.18□□□□□ -1.26
NEDD9-216ENST00000620854 LRCH4O75427 683 aa7.18□□□□□ -1.26
NEDD9-216ENST00000620854 MYCP01106 439 aaPredicted RBP7.18□□□□□ -1.26
NEDD9-216ENST00000620854 C4BPAP04003 597 aaKnown RBP7.18□□□□□ -1.26
NEDD9-216ENST00000620854 MAPTP10636 758 aaKnown RBP7.18□□□□□ -1.26
NEDD9-216ENST00000620854 PTPRAP18433 802 aa7.18□□□□□ -1.26
NEDD9-216ENST00000620854 KDELR1P24390 212 aa7.18□□□□□ -1.26
NEDD9-216ENST00000620854 HOXD10P28358 340 aa7.18□□□□□ -1.26
NEDD9-216ENST00000620854 MRPS5P82675 430 aaKnown RBP7.18□□□□□ -1.26
NEDD9-216ENST00000620854 FOLH1Q04609 750 aa7.18□□□□□ -1.26
NEDD9-216ENST00000620854 PTP4A2Q12974 167 aa7.18□□□□□ -1.26
NEDD9-216ENST00000620854 KRT72Q14CN4 511 aa7.18□□□□□ -1.26
NEDD9-216ENST00000620854 ZNF667Q5HYK9 610 aa7.18□□□□□ -1.26
NEDD9-216ENST00000620854 CES3Q6UWW8 571 aa7.18□□□□□ -1.26
NEDD9-216ENST00000620854 PTAR1Q7Z6K3 402 aaPredicted RBP7.18□□□□□ -1.26
NEDD9-216ENST00000620854 TRIM74Q86UV6 250 aa7.18□□□□□ -1.26
NEDD9-216ENST00000620854 TRIM73Q86UV7 250 aa7.18□□□□□ -1.26
NEDD9-216ENST00000620854 SLC26A11Q86WA9 606 aa7.18□□□□□ -1.26
NEDD9-216ENST00000620854 TRIM42Q8IWZ5 723 aa7.18□□□□□ -1.26
NEDD9-216ENST00000620854 ICA1LQ8NDH6 482 aa7.18□□□□□ -1.26
NEDD9-216ENST00000620854 ADAM32Q8TC27 787 aa7.18□□□□□ -1.26
NEDD9-216ENST00000620854 EXT2Q93063 718 aa7.18□□□□□ -1.26
NEDD9-216ENST00000620854 PRPF18Q99633 342 aaKnown RBP7.18□□□□□ -1.26
NEDD9-216ENST00000620854 MIS12Q9H081 205 aa7.18□□□□□ -1.26
NEDD9-216ENST00000620854 MRPL46Q9H2W6 279 aaKnown RBP7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms