RNA–Protein interactions for RNA: ENST00000618538.1

SEC22B-202, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

TSL 3

Gene SEC22B, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-202ENST00000618538 APOBEC3FQ8IUX4 373 aaKnown RBP4.49□□□□□ -1.69
SEC22B-202ENST00000618538 ZBTB8OSQ8IWT0 167 aa4.49□□□□□ -1.69
SEC22B-202ENST00000618538 ENDOVQ8N8Q3 282 aaKnown RBP4.49□□□□□ -1.69
SEC22B-202ENST00000618538 NETO2Q8NC67 525 aa4.49□□□□□ -1.69
SEC22B-202ENST00000618538 CCDC110Q8TBZ0 833 aa4.49□□□□□ -1.69
SEC22B-202ENST00000618538 CLEC4CQ8WTT0 213 aa4.49□□□□□ -1.69
SEC22B-202ENST00000618538 PPP1R13LQ8WUF5 828 aa4.49□□□□□ -1.69
SEC22B-202ENST00000618538 WDR60Q8WVS4 1066 aa4.49□□□□□ -1.69
SEC22B-202ENST00000618538 CFAP36Q96G28 342 aa4.49□□□□□ -1.69
SEC22B-202ENST00000618538 SPATA33Q96N06 139 aa4.49□□□□□ -1.69
SEC22B-202ENST00000618538 USB1Q9BQ65 265 aaKnown RBP4.49□□□□□ -1.69
SEC22B-202ENST00000618538 MRPL45Q9BRJ2 306 aaKnown RBP4.49□□□□□ -1.69
SEC22B-202ENST00000618538 FDXACB1Q9BRP7 624 aaPredicted RBP4.49□□□□□ -1.69
SEC22B-202ENST00000618538 ADPGKQ9BRR6 497 aa4.49□□□□□ -1.69
SEC22B-202ENST00000618538 CNPY3Q9BT09 278 aa4.49□□□□□ -1.69
SEC22B-202ENST00000618538 C11orf84Q9BUA3 381 aaPredicted RBP4.49□□□□□ -1.69
SEC22B-202ENST00000618538 SNRNP25Q9BV90 132 aaKnown RBP4.49□□□□□ -1.69
SEC22B-202ENST00000618538 TMEM120AQ9BXJ8 343 aa4.49□□□□□ -1.69
SEC22B-202ENST00000618538 VPS11Q9H270 941 aa4.49□□□□□ -1.69
SEC22B-202ENST00000618538 MANSC1Q9H8J5 431 aa4.49□□□□□ -1.69
SEC22B-202ENST00000618538 VRTNQ9H8Y1 702 aa4.49□□□□□ -1.69
SEC22B-202ENST00000618538 PPCSQ9HAB8 311 aa4.49□□□□□ -1.69
SEC22B-202ENST00000618538 MTMR10Q9NXD2 777 aa4.49□□□□□ -1.69
SEC22B-202ENST00000618538 ARMCX1Q9P291 453 aa4.49□□□□□ -1.69
SEC22B-202ENST00000618538 RBPJLQ9UBG7 517 aa4.49□□□□□ -1.69
SEC22B-202ENST00000618538 HEY2Q9UBP5 337 aa4.49□□□□□ -1.69
SEC22B-202ENST00000618538 LNPEPQ9UIQ6 1025 aa4.49□□□□□ -1.69
SEC22B-202ENST00000618538 ZFP69BQ9UJL9 534 aa4.49□□□□□ -1.69
SEC22B-202ENST00000618538 TSPAN16Q9UKR8 245 aa4.49□□□□□ -1.69
SEC22B-202ENST00000618538 CEP83Q9Y592 693 aa4.49□□□□□ -1.69
SEC22B-202ENST00000618538 CCDC195A0A1B0GUA6 201 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 SLC15A5A6NIM6 579 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.48□□□□□ -1.69
SEC22B-202ENST00000618538 TRIM49D1C9J1S8 452 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 F5H423 210 aaPredicted RBP4.48□□□□□ -1.69
SEC22B-202ENST00000618538 KCNN4O15554 427 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 PAPSS1O43252 624 aaPredicted RBP4.48□□□□□ -1.69
SEC22B-202ENST00000618538 LPXNO60711 386 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 PRKCGP05129 697 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 ZNF286BP0CG31 522 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 TGFB3P10600 412 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 INSRRP14616 1297 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 PDGFRAP16234 1089 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 GPD1P21695 349 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 CALB2P22676 271 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 PRKCHP24723 683 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 PTPN4P29074 926 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 GBP2P32456 591 aaPredicted RBP4.48□□□□□ -1.69
SEC22B-202ENST00000618538 PHBP35232 272 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 IRS1P35568 1242 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 CCNFP41002 786 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 MAGEA6P43360 314 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 SERPINB4P48594 390 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 YWHAGP61981 247 aaKnown RBP eCLIP4.48□□□□□ -1.69
SEC22B-202ENST00000618538 IGBP1P78318 339 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 ZNF200P98182 395 aaPredicted RBP4.48□□□□□ -1.69
SEC22B-202ENST00000618538 GBE1Q04446 702 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 ARHGAP1Q07960 439 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 SETDB1Q15047 1291 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 SURF1Q15526 300 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 HADHQ16836 314 aaKnown RBP4.48□□□□□ -1.69
SEC22B-202ENST00000618538 GOLGA7BQ2TAP0 167 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 ACSBG2Q5FVE4 666 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 SPDYAQ5MJ70 313 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 PPP1R26Q5T8A7 1209 aaPredicted RBP4.48□□□□□ -1.69
SEC22B-202ENST00000618538 SLC9A4Q6AI14 798 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 DARS2Q6PI48 645 aaKnown RBP4.48□□□□□ -1.69
SEC22B-202ENST00000618538 UNC5AQ6ZN44 842 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 GADL1Q6ZQY3 521 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 C4orf50Q6ZRC1 276 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 PCGF5Q86SE9 256 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 PALM2Q8IXS6 379 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 PDIK1LQ8N165 341 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.48□□□□□ -1.69
SEC22B-202ENST00000618538 NLGN2Q8NFZ4 835 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 ZNF398Q8TD17 642 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 STK32AQ8WU08 396 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 TTC17Q96AE7 1141 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 FAF2Q96CS3 445 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 OXNAD1Q96HP4 312 aaPredicted RBP4.48□□□□□ -1.69
SEC22B-202ENST00000618538 HPDLQ96IR7 371 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 FAM167AQ96KS9 214 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 HEXIM2Q96MH2 286 aaKnown RBP4.48□□□□□ -1.69
SEC22B-202ENST00000618538 ZNF778Q96MU6 729 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 ZMAT2Q96NC0 199 aaKnown RBP4.48□□□□□ -1.69
SEC22B-202ENST00000618538 SRPK1Q96SB4 655 aaKnown RBP4.48□□□□□ -1.69
SEC22B-202ENST00000618538 CYTH2Q99418 400 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 FAM167BQ9BTA0 163 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 TSSK1BQ9BXA7 367 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 FRMD8P1Q9BZ68 369 aaPredicted RBP4.48□□□□□ -1.69
SEC22B-202ENST00000618538 NMUR2Q9GZQ4 415 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 MAF1Q9H063 256 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 DPEP3Q9H4B8 488 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 SYNCQ9H7C4 482 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 RPF1Q9H9Y2 349 aaKnown RBP4.48□□□□□ -1.69
SEC22B-202ENST00000618538 RSAD1Q9HA92 442 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 PNPLA8Q9NP80 782 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 TMPRSS4Q9NRS4 437 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 RAB6BQ9NRW1 208 aa4.48□□□□□ -1.69
SEC22B-202ENST00000618538 FAM49BQ9NUQ9 324 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms