RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 HSF5Q4G112 596 aaPredicted RBP9.04□□□□□ -0.96
GPC6-202ENST00000617456 SPDYCQ5MJ68 293 aa9.04□□□□□ -0.96
GPC6-202ENST00000617456 LY6G5CQ5SRR4 150 aa9.04□□□□□ -0.96
GPC6-202ENST00000617456 SLC36A4Q6YBV0 504 aa9.04□□□□□ -0.96
GPC6-202ENST00000617456 DENND5BQ6ZUT9 1274 aa9.04□□□□□ -0.96
GPC6-202ENST00000617456 CBWD2Q8IUF1 395 aa9.04□□□□□ -0.96
GPC6-202ENST00000617456 TRIML1Q8N9V2 468 aa9.04□□□□□ -0.96
GPC6-202ENST00000617456 MYCBPAPQ8TBZ2 947 aa9.04□□□□□ -0.96
GPC6-202ENST00000617456 TAF4BQ92750 862 aa9.04□□□□□ -0.96
GPC6-202ENST00000617456 SYAP1Q96A49 352 aaPredicted RBP9.04□□□□□ -0.96
GPC6-202ENST00000617456 CCDC34Q96HJ3 373 aa9.04□□□□□ -0.96
GPC6-202ENST00000617456 FAXDC2Q96IV6 333 aa9.04□□□□□ -0.96
GPC6-202ENST00000617456 CGRRF1Q99675 332 aa9.04□□□□□ -0.96
GPC6-202ENST00000617456 FGFBP2Q9BYJ0 223 aa9.04□□□□□ -0.96
GPC6-202ENST00000617456 IQCGQ9H095 443 aaKnown RBP9.04□□□□□ -0.96
GPC6-202ENST00000617456 CCDC86Q9H6F5 360 aaKnown RBP9.04□□□□□ -0.96
GPC6-202ENST00000617456 CAPN10Q9HC96 672 aa9.04□□□□□ -0.96
GPC6-202ENST00000617456 DMAC2Q9NW81 257 aa9.04□□□□□ -0.96
GPC6-202ENST00000617456 CYP8B1Q9UNU6 501 aa9.04□□□□□ -0.96
GPC6-202ENST00000617456 ZNF232Q9UNY5 417 aa9.04□□□□□ -0.96
GPC6-202ENST00000617456 HPSEQ9Y251 543 aa9.04□□□□□ -0.96
GPC6-202ENST00000617456 GOLGA4Q13439 2230 aaKnown RBP9.04□□□□□ -0.96
GPC6-202ENST00000617456 LAMA5O15230 3695 aa9.03□□□□□ -0.96
GPC6-202ENST00000617456 URB1O60287 2271 aaKnown RBP9.03□□□□□ -0.96
GPC6-202ENST00000617456 A0A1W2PQ27 194 aa9.03□□□□□ -0.96
GPC6-202ENST00000617456 A0A1W2PQ64 194 aa9.03□□□□□ -0.96
GPC6-202ENST00000617456 A0A1W2PQD8 194 aa9.03□□□□□ -0.96
GPC6-202ENST00000617456 FAM221BA6H8Z2 402 aa9.03□□□□□ -0.96
GPC6-202ENST00000617456 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.03□□□□□ -0.96
GPC6-202ENST00000617456 TRIM66O15016 1216 aa9.03□□□□□ -0.96
GPC6-202ENST00000617456 ZBTB24O43167 697 aaPredicted RBP9.03□□□□□ -0.96
GPC6-202ENST00000617456 CTIFO43310 598 aaKnown RBP9.03□□□□□ -0.96
GPC6-202ENST00000617456 CAPNS1P04632 268 aa9.03□□□□□ -0.96
GPC6-202ENST00000617456 RPN1P04843 607 aaKnown RBP9.03□□□□□ -0.96
GPC6-202ENST00000617456 SYPP08247 313 aa9.03□□□□□ -0.96
GPC6-202ENST00000617456 FTH1P19P0C7X4 201 aa9.03□□□□□ -0.96
GPC6-202ENST00000617456 HOXB2P14652 356 aa9.03□□□□□ -0.96
GPC6-202ENST00000617456 GABRG2P18507 467 aa9.03□□□□□ -0.96
GPC6-202ENST00000617456 GNL1P36915 607 aaPredicted RBP9.03□□□□□ -0.96
GPC6-202ENST00000617456 TRPC1P48995 793 aa9.03□□□□□ -0.96
GPC6-202ENST00000617456 TAF10Q12962 218 aa9.03□□□□□ -0.96
GPC6-202ENST00000617456 IFT88Q13099 833 aa9.03□□□□□ -0.96
GPC6-202ENST00000617456 TMED1Q13445 227 aa9.03□□□□□ -0.96
GPC6-202ENST00000617456 HNRNPDQ14103 355 aaKnown RBP9.03□□□□□ -0.96
GPC6-202ENST00000617456 PLEKHG6Q3KR16 790 aa9.03□□□□□ -0.96
GPC6-202ENST00000617456 MDH1BQ5I0G3 518 aa9.03□□□□□ -0.96
GPC6-202ENST00000617456 C10orf76Q5T2E6 689 aa9.03□□□□□ -0.96
GPC6-202ENST00000617456 PEAR1Q5VY43 1037 aaPredicted RBP9.03□□□□□ -0.96
GPC6-202ENST00000617456 BTBD8Q5XKL5 378 aa9.03□□□□□ -0.96
GPC6-202ENST00000617456 RABEPKQ7Z6M1 372 aa9.03□□□□□ -0.96
GPC6-202ENST00000617456 FMNL3Q8IVF7 1028 aa9.03□□□□□ -0.96
GPC6-202ENST00000617456 RGL4Q8IZJ4 473 aa9.03□□□□□ -0.96
GPC6-202ENST00000617456 OR5B17Q8NGF7 314 aa9.03□□□□□ -0.96
GPC6-202ENST00000617456 MDM1Q8TC05 714 aa9.03□□□□□ -0.96
GPC6-202ENST00000617456 PARD3BQ8TEW8 1205 aa9.03□□□□□ -0.96
GPC6-202ENST00000617456 KBTBD7Q8WVZ9 684 aa9.03□□□□□ -0.96
GPC6-202ENST00000617456 OVCA2Q8WZ82 227 aa9.03□□□□□ -0.96
GPC6-202ENST00000617456 CCDC47Q96A33 483 aaKnown RBP9.03□□□□□ -0.96
GPC6-202ENST00000617456 PAGE5Q96GU1 130 aa9.03□□□□□ -0.96
GPC6-202ENST00000617456 C8orf48Q96LL4 319 aa9.03□□□□□ -0.96
GPC6-202ENST00000617456 HSPA12BQ96MM6 686 aa9.03□□□□□ -0.96
GPC6-202ENST00000617456 DUSP9Q99956 384 aaKnown RBP9.03□□□□□ -0.96
GPC6-202ENST00000617456 TTLL2Q9BWV7 592 aa9.03□□□□□ -0.96
GPC6-202ENST00000617456 FAM124BQ9H5Z6 455 aaPredicted RBP9.03□□□□□ -0.96
GPC6-202ENST00000617456 CRTAC1Q9NQ79 661 aa9.03□□□□□ -0.96
GPC6-202ENST00000617456 COMMD8Q9NX08 183 aa9.03□□□□□ -0.96
GPC6-202ENST00000617456 RAXQ9Y2V3 346 aa9.03□□□□□ -0.96
GPC6-202ENST00000617456 TNRC6BQ9UPQ9 1833 aaKnown RBP9.03□□□□□ -0.96
GPC6-202ENST00000617456 KNL1Q8NG31 2342 aa9.02□□□□□ -0.97
GPC6-202ENST00000617456 IGHV1OR15-9A0A0B4J2B8 117 aa9.02□□□□□ -0.97
GPC6-202ENST00000617456 EIF4E1BA6NMX2 242 aaKnown RBP9.02□□□□□ -0.97
GPC6-202ENST00000617456 F8VP50 259 aa9.02□□□□□ -0.97
GPC6-202ENST00000617456 TRIM24O15164 1050 aa9.02□□□□□ -0.97
GPC6-202ENST00000617456 CBFA2T2O43439 604 aa9.02□□□□□ -0.97
GPC6-202ENST00000617456 ACTN4O43707 911 aaKnown RBP9.02□□□□□ -0.97
GPC6-202ENST00000617456 KLRC4O43908 158 aa9.02□□□□□ -0.97
GPC6-202ENST00000617456 EXOC3O60645 756 aa9.02□□□□□ -0.97
GPC6-202ENST00000617456 NDUFS2O75306 463 aa9.02□□□□□ -0.97
GPC6-202ENST00000617456 CPP00450 1065 aa9.02□□□□□ -0.97
GPC6-202ENST00000617456 CST3P01034 146 aaPredicted RBP9.02□□□□□ -0.97
GPC6-202ENST00000617456 P4HA1P13674 534 aa9.02□□□□□ -0.97
GPC6-202ENST00000617456 FLT3P36888 993 aa9.02□□□□□ -0.97
GPC6-202ENST00000617456 EIF2DP41214 584 aaKnown RBP9.02□□□□□ -0.97
GPC6-202ENST00000617456 HNRNPH2P55795 449 aaKnown RBP9.02□□□□□ -0.97
GPC6-202ENST00000617456 TNNC1P63316 161 aa9.02□□□□□ -0.97
GPC6-202ENST00000617456 DNM1Q05193 864 aaKnown RBP9.02□□□□□ -0.97
GPC6-202ENST00000617456 GAD2Q05329 585 aa9.02□□□□□ -0.97
GPC6-202ENST00000617456 TRPC3Q13507 836 aa9.02□□□□□ -0.97
GPC6-202ENST00000617456 CUL4BQ13620 913 aa9.02□□□□□ -0.97
GPC6-202ENST00000617456 SGSM1Q2NKQ1 1148 aa9.02□□□□□ -0.97
GPC6-202ENST00000617456 ANO4Q32M45 955 aa9.02□□□□□ -0.97
GPC6-202ENST00000617456 WDR72Q3MJ13 1102 aa9.02□□□□□ -0.97
GPC6-202ENST00000617456 TDRD10Q5VZ19 366 aaKnown RBP9.02□□□□□ -0.97
GPC6-202ENST00000617456 EGFLAMQ63HQ2 1017 aa9.02□□□□□ -0.97
GPC6-202ENST00000617456 CCNI2Q6ZMN8 369 aaPredicted RBP9.02□□□□□ -0.97
GPC6-202ENST00000617456 TRMT11Q7Z4G4 463 aaKnown RBP9.02□□□□□ -0.97
GPC6-202ENST00000617456 TRIM74Q86UV6 250 aa9.02□□□□□ -0.97
GPC6-202ENST00000617456 TRIM73Q86UV7 250 aa9.02□□□□□ -0.97
GPC6-202ENST00000617456 MIB1Q86YT6 1006 aa9.02□□□□□ -0.97
GPC6-202ENST00000617456 SLC41A1Q8IVJ1 513 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms