RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 TBC1D30Q9Y2I9 924 aa3.46□□□□□ -1.85
LPP-220ENST00000617246 FRMPD4Q14CM0 1322 aa3.46□□□□□ -1.85
LPP-220ENST00000617246 POTEFA5A3E0 1075 aa3.46□□□□□ -1.85
LPP-220ENST00000617246 EEF2KO00418 725 aaKnown RBP3.46□□□□□ -1.85
LPP-220ENST00000617246 POTEIP0CG38 1075 aa3.46□□□□□ -1.85
LPP-220ENST00000617246 NUP62P37198 522 aaPredicted RBP3.46□□□□□ -1.85
LPP-220ENST00000617246 CDH13P55290 713 aa3.46□□□□□ -1.85
LPP-220ENST00000617246 IL2P60568 153 aa3.46□□□□□ -1.85
LPP-220ENST00000617246 ACTR1AP61163 376 aa3.46□□□□□ -1.85
LPP-220ENST00000617246 BAATQ14032 418 aaPredicted RBP3.46□□□□□ -1.85
LPP-220ENST00000617246 P3H1Q32P28 736 aa3.46□□□□□ -1.85
LPP-220ENST00000617246 POTEEQ6S8J3 1075 aa3.46□□□□□ -1.85
LPP-220ENST00000617246 SLC9B2Q86UD5 537 aa3.46□□□□□ -1.85
LPP-220ENST00000617246 SIRT2Q8IXJ6 389 aa3.46□□□□□ -1.85
LPP-220ENST00000617246 GMCL1P1Q8NEA9 526 aa3.46□□□□□ -1.85
LPP-220ENST00000617246 HELQQ8TDG4 1101 aa3.46□□□□□ -1.85
LPP-220ENST00000617246 ADAMTS19Q8TE59 1207 aa3.46□□□□□ -1.85
LPP-220ENST00000617246 TRIM63Q969Q1 353 aa3.46□□□□□ -1.85
LPP-220ENST00000617246 PHF21AQ96BD5 680 aa3.46□□□□□ -1.85
LPP-220ENST00000617246 RADILQ96JH8 1075 aa3.46□□□□□ -1.85
LPP-220ENST00000617246 LXNQ9BS40 222 aa3.46□□□□□ -1.85
LPP-220ENST00000617246 UBE2ZQ9H832 354 aaPredicted RBP3.46□□□□□ -1.85
LPP-220ENST00000617246 Q9Y3F1 56 aa3.46□□□□□ -1.85
LPP-220ENST00000617246 C8AP07357 584 aa3.46□□□□□ -1.86
LPP-220ENST00000617246 OR12D1P0DN82 309 aa3.46□□□□□ -1.86
LPP-220ENST00000617246 RBP3P10745 1247 aa3.46□□□□□ -1.86
LPP-220ENST00000617246 PCBP4P57723 403 aaKnown RBP3.46□□□□□ -1.86
LPP-220ENST00000617246 E2F1Q01094 437 aa3.46□□□□□ -1.86
LPP-220ENST00000617246 MMEL1Q495T6 779 aa3.46□□□□□ -1.86
LPP-220ENST00000617246 BSPRYQ5W0U4 402 aa3.46□□□□□ -1.86
LPP-220ENST00000617246 CCDC186Q7Z3E2 898 aa3.46□□□□□ -1.86
LPP-220ENST00000617246 FAM186BQ8IYM0 893 aa3.46□□□□□ -1.86
LPP-220ENST00000617246 TBC1D32Q96NH3 1257 aa3.46□□□□□ -1.86
LPP-220ENST00000617246 KLC2Q9H0B6 622 aa3.46□□□□□ -1.86
LPP-220ENST00000617246 RNF39Q9H2S5 420 aa3.46□□□□□ -1.86
LPP-220ENST00000617246 KCNQ5Q9NR82 932 aa3.46□□□□□ -1.86
LPP-220ENST00000617246 ANGPTL2Q9UKU9 493 aa3.46□□□□□ -1.86
LPP-220ENST00000617246 TTC36A6NLP5 189 aa3.46□□□□□ -1.86
LPP-220ENST00000617246 B2RBV5 119 aa3.46□□□□□ -1.86
LPP-220ENST00000617246 IL13P35225 146 aa3.46□□□□□ -1.86
LPP-220ENST00000617246 BPIFB1Q8TDL5 484 aa3.46□□□□□ -1.86
LPP-220ENST00000617246 MOV10L1Q9BXT6 1211 aaKnown RBP3.46□□□□□ -1.86
LPP-220ENST00000617246 GPSM3Q9Y4H4 160 aa3.46□□□□□ -1.86
LPP-220ENST00000617246 HEATR9A2RTY3 570 aa3.46□□□□□ -1.86
LPP-220ENST00000617246 H7C0C1 242 aa3.46□□□□□ -1.86
LPP-220ENST00000617246 DFFAO00273 331 aa3.46□□□□□ -1.86
LPP-220ENST00000617246 PER2O15055 1255 aa3.46□□□□□ -1.86
LPP-220ENST00000617246 GUCY1A2P33402 732 aa3.46□□□□□ -1.86
LPP-220ENST00000617246 SCNN1AP37088 669 aa3.46□□□□□ -1.86
LPP-220ENST00000617246 ATP5OP48047 213 aa3.46□□□□□ -1.86
LPP-220ENST00000617246 PDAP1Q13442 181 aaKnown RBP3.46□□□□□ -1.86
LPP-220ENST00000617246 ATF7IP2Q5U623 682 aa3.46□□□□□ -1.86
LPP-220ENST00000617246 PLEKHO2Q8TD55 490 aa3.46□□□□□ -1.86
LPP-220ENST00000617246 MAML3Q96JK9 1138 aa3.46□□□□□ -1.86
LPP-220ENST00000617246 ZDHHC6Q9H6R6 413 aa3.46□□□□□ -1.86
LPP-220ENST00000617246 AFF4Q9UHB7 1163 aaKnown RBP3.46□□□□□ -1.86
LPP-220ENST00000617246 SMIM35A0A1B0GVV1 85 aa3.46□□□□□ -1.86
LPP-220ENST00000617246 TBX3O15119 743 aa3.46□□□□□ -1.86
LPP-220ENST00000617246 VIPP01282 170 aa3.46□□□□□ -1.86
LPP-220ENST00000617246 IL1BP01584 269 aa3.46□□□□□ -1.86
LPP-220ENST00000617246 VIL1P09327 827 aaKnown RBP3.46□□□□□ -1.86
LPP-220ENST00000617246 IRS1P35568 1242 aa3.46□□□□□ -1.86
LPP-220ENST00000617246 TMED10P49755 219 aaKnown RBP3.46□□□□□ -1.86
LPP-220ENST00000617246 TFDP2Q14188 446 aa3.46□□□□□ -1.86
LPP-220ENST00000617246 ITPRIPL2Q3MIP1 535 aa3.46□□□□□ -1.86
LPP-220ENST00000617246 MPPE1Q53F39 396 aa3.46□□□□□ -1.86
LPP-220ENST00000617246 DCLRE1AQ6PJP8 1040 aa3.46□□□□□ -1.86
LPP-220ENST00000617246 SV2AQ7L0J3 742 aa3.46□□□□□ -1.86
LPP-220ENST00000617246 POMGNT2Q8NAT1 580 aa3.46□□□□□ -1.86
LPP-220ENST00000617246 ASZ1Q8WWH4 475 aa3.46□□□□□ -1.86
LPP-220ENST00000617246 ZNF512BQ96KM6 892 aaPredicted RBP3.46□□□□□ -1.86
LPP-220ENST00000617246 PHACTR1Q9C0D0 580 aa3.46□□□□□ -1.86
LPP-220ENST00000617246 CASS4Q9NQ75 786 aa3.46□□□□□ -1.86
LPP-220ENST00000617246 AHSPQ9NZD4 102 aa3.46□□□□□ -1.86
LPP-220ENST00000617246 TARSL2A2RTX5 802 aaKnown RBP3.46□□□□□ -1.86
LPP-220ENST00000617246 CFAP69A5D8W1 941 aa3.46□□□□□ -1.86
LPP-220ENST00000617246 RBAK-RBAKDNI3L0D1 243 aa3.46□□□□□ -1.86
LPP-220ENST00000617246 CRTAMO95727 393 aa3.46□□□□□ -1.86
LPP-220ENST00000617246 CSTBP04080 98 aaKnown RBP3.46□□□□□ -1.86
LPP-220ENST00000617246 TLX1P31314 330 aaPredicted RBP3.46□□□□□ -1.86
LPP-220ENST00000617246 ARL4CP56559 192 aa3.46□□□□□ -1.86
LPP-220ENST00000617246 ZBED6P86452 979 aa3.46□□□□□ -1.86
LPP-220ENST00000617246 SLC6A3Q01959 620 aa3.46□□□□□ -1.86
LPP-220ENST00000617246 MYL5Q02045 173 aa3.46□□□□□ -1.86
LPP-220ENST00000617246 TXNRD3Q86VQ6 643 aa3.46□□□□□ -1.86
LPP-220ENST00000617246 MAPK15Q8TD08 544 aa3.46□□□□□ -1.86
LPP-220ENST00000617246 MTA3Q9BTC8 594 aa3.46□□□□□ -1.86
LPP-220ENST00000617246 KIAA1024Q9UPX6 916 aa3.46□□□□□ -1.86
LPP-220ENST00000617246 GSAPA4D1B5 854 aa3.46□□□□□ -1.86
LPP-220ENST00000617246 NDUFS1P28331 727 aa3.46□□□□□ -1.86
LPP-220ENST00000617246 RAB28P51157 221 aa3.46□□□□□ -1.86
LPP-220ENST00000617246 ITGA8P53708 1063 aa3.46□□□□□ -1.86
LPP-220ENST00000617246 PSMD4P55036 377 aaKnown RBP3.46□□□□□ -1.86
LPP-220ENST00000617246 CAPRIN1Q14444 709 aaKnown RBP3.46□□□□□ -1.86
LPP-220ENST00000617246 MEA1Q16626 185 aa3.46□□□□□ -1.86
LPP-220ENST00000617246 KDM7AQ6ZMT4 941 aa3.46□□□□□ -1.86
LPP-220ENST00000617246 MYLIPQ8WY64 445 aa3.46□□□□□ -1.86
LPP-220ENST00000617246 ELAC2Q9BQ52 826 aaKnown RBP3.46□□□□□ -1.86
LPP-220ENST00000617246 GIT1Q9Y2X7 761 aa3.46□□□□□ -1.86
LPP-220ENST00000617246 DTNAQ9Y4J8 743 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms