RNA–Protein interactions for RNA: ENST00000617209.1

SRGAP2C-205, Transcript of SLIT-ROBO Rho GTPase activating protein 2C, humanhuman

TSL 5

Gene SRGAP2C, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2C-205ENST00000617209 TNFRSF4P43489 277 aa16.17■□□□□ 0.18
SRGAP2C-205ENST00000617209 SLC6A11P48066 632 aa16.17■□□□□ 0.18
SRGAP2C-205ENST00000617209 SATB1Q01826 763 aa16.17■□□□□ 0.18
SRGAP2C-205ENST00000617209 PDCLQ13371 301 aa16.17■□□□□ 0.18
SRGAP2C-205ENST00000617209 SLC47A2Q86VL8 602 aa16.17■□□□□ 0.18
SRGAP2C-205ENST00000617209 FAM217AQ8IXS0 508 aa16.17■□□□□ 0.18
SRGAP2C-205ENST00000617209 PHTF2Q8N3S3 785 aa16.17■□□□□ 0.18
SRGAP2C-205ENST00000617209 CPXM2Q8N436 756 aa16.17■□□□□ 0.18
SRGAP2C-205ENST00000617209 NKD2Q969F2 451 aaPredicted RBP16.17■□□□□ 0.18
SRGAP2C-205ENST00000617209 FUCA2Q9BTY2 467 aa16.17■□□□□ 0.18
SRGAP2C-205ENST00000617209 LSM14BQ9BX40 385 aaKnown RBP16.17■□□□□ 0.18
SRGAP2C-205ENST00000617209 MIS12Q9H081 205 aa16.17■□□□□ 0.18
SRGAP2C-205ENST00000617209 GANQ9H2C0 597 aa16.17■□□□□ 0.18
SRGAP2C-205ENST00000617209 DEC1Q9P2X7 70 aa16.17■□□□□ 0.18
SRGAP2C-205ENST00000617209 STOML2Q9UJZ1 356 aa16.17■□□□□ 0.18
SRGAP2C-205ENST00000617209 AGO1Q9UL18 857 aaKnown RBP16.17■□□□□ 0.18
SRGAP2C-205ENST00000617209 SIK3Q9Y2K2 1263 aa16.17■□□□□ 0.18
SRGAP2C-205ENST00000617209 CCDC163A0A0D9SF12 145 aa16.16■□□□□ 0.18
SRGAP2C-205ENST00000617209 LGALS16A8MUM7 142 aa16.16■□□□□ 0.18
SRGAP2C-205ENST00000617209 PIK3R2O00459 728 aa16.16■□□□□ 0.18
SRGAP2C-205ENST00000617209 PAPSS1O43252 624 aaPredicted RBP16.16■□□□□ 0.18
SRGAP2C-205ENST00000617209 CACNG3O60359 315 aa16.16■□□□□ 0.18
SRGAP2C-205ENST00000617209 TULP3O75386 442 aa16.16■□□□□ 0.18
SRGAP2C-205ENST00000617209 KAT7O95251 611 aa16.16■□□□□ 0.18
SRGAP2C-205ENST00000617209 LATS1O95835 1130 aa16.16■□□□□ 0.18
SRGAP2C-205ENST00000617209 CYP11B1P15538 503 aa16.16■□□□□ 0.18
SRGAP2C-205ENST00000617209 SNX16P57768 344 aa16.16■□□□□ 0.18
SRGAP2C-205ENST00000617209 YWHAZP63104 245 aaKnown RBP16.16■□□□□ 0.18
SRGAP2C-205ENST00000617209 MRPS21P82921 87 aaKnown RBP16.16■□□□□ 0.18
SRGAP2C-205ENST00000617209 RING1Q06587 406 aa16.16■□□□□ 0.18
SRGAP2C-205ENST00000617209 RAPGEF1Q13905 1077 aa16.16■□□□□ 0.18
SRGAP2C-205ENST00000617209 ANO4Q32M45 955 aa16.16■□□□□ 0.18
SRGAP2C-205ENST00000617209 PKN3Q6P5Z2 889 aa16.16■□□□□ 0.18
SRGAP2C-205ENST00000617209 TSSK4Q6SA08 328 aa16.16■□□□□ 0.18
SRGAP2C-205ENST00000617209 NUDT18Q6ZVK8 323 aa16.16■□□□□ 0.18
SRGAP2C-205ENST00000617209 SYT13Q7L8C5 426 aa16.16■□□□□ 0.18
SRGAP2C-205ENST00000617209 ALYREFQ86V81 257 aaKnown RBP16.16■□□□□ 0.18
SRGAP2C-205ENST00000617209 C12orf40Q86WS4 652 aa16.16■□□□□ 0.18
SRGAP2C-205ENST00000617209 FMNL3Q8IVF7 1028 aa16.16■□□□□ 0.18
SRGAP2C-205ENST00000617209 CAMKK1Q8N5S9 505 aa16.16■□□□□ 0.18
SRGAP2C-205ENST00000617209 AOPEPQ8N6M6 819 aa16.16■□□□□ 0.18
SRGAP2C-205ENST00000617209 KCNV2Q8TDN2 545 aa16.16■□□□□ 0.18
SRGAP2C-205ENST00000617209 CLEC4CQ8WTT0 213 aa16.16■□□□□ 0.18
SRGAP2C-205ENST00000617209 ATRIPQ8WXE1 791 aa16.16■□□□□ 0.18
SRGAP2C-205ENST00000617209 NOX5Q96PH1 765 aa16.16■□□□□ 0.18
SRGAP2C-205ENST00000617209 ERGIC2Q96RQ1 377 aa16.16■□□□□ 0.18
SRGAP2C-205ENST00000617209 BBS2Q9BXC9 721 aa16.16■□□□□ 0.18
SRGAP2C-205ENST00000617209 IRX2Q9BZI1 471 aaPredicted RBP16.16■□□□□ 0.18
SRGAP2C-205ENST00000617209 ARHGEF4Q9NR80 690 aa16.16■□□□□ 0.18
SRGAP2C-205ENST00000617209 FBXO10Q9UK96 956 aa16.16■□□□□ 0.18
SRGAP2C-205ENST00000617209 R4GN57 208 aa16.16■□□□□ 0.18
SRGAP2C-205ENST00000617209 FAM186AA6NE01 2351 aa16.15■□□□□ 0.18
SRGAP2C-205ENST00000617209 ZNF292O60281 2723 aa16.15■□□□□ 0.18
SRGAP2C-205ENST00000617209 E5RJQ4 531 aa16.15■□□□□ 0.18
SRGAP2C-205ENST00000617209 F8VZ95 297 aa16.15■□□□□ 0.18
SRGAP2C-205ENST00000617209 PENKP01210 267 aaPredicted RBP16.15■□□□□ 0.18
SRGAP2C-205ENST00000617209 IGLV3-27P01718 113 aa16.15■□□□□ 0.18
SRGAP2C-205ENST00000617209 APODP05090 189 aa16.15■□□□□ 0.18
SRGAP2C-205ENST00000617209 GLI1P08151 1106 aa16.15■□□□□ 0.18
SRGAP2C-205ENST00000617209 PNMA6AP0CW24 399 aaPredicted RBP16.15■□□□□ 0.18
SRGAP2C-205ENST00000617209 TYRP14679 529 aa16.15■□□□□ 0.18
SRGAP2C-205ENST00000617209 CORO1AP31146 461 aaKnown RBP16.15■□□□□ 0.18
SRGAP2C-205ENST00000617209 CDH5P33151 784 aaPredicted RBP16.15■□□□□ 0.18
SRGAP2C-205ENST00000617209 HARS2P49590 506 aaKnown RBP16.15■□□□□ 0.18
SRGAP2C-205ENST00000617209 ZNF165P49910 485 aa16.15■□□□□ 0.18
SRGAP2C-205ENST00000617209 NNTQ13423 1086 aa16.15■□□□□ 0.18
SRGAP2C-205ENST00000617209 SKOR2Q2VWA4 1001 aaPredicted RBP16.15■□□□□ 0.18
SRGAP2C-205ENST00000617209 HSF5Q4G112 596 aaPredicted RBP16.15■□□□□ 0.18
SRGAP2C-205ENST00000617209 DENND1CQ8IV53 801 aa16.15■□□□□ 0.18
SRGAP2C-205ENST00000617209 DHX40Q8IX18 779 aaKnown RBP16.15■□□□□ 0.18
SRGAP2C-205ENST00000617209 USP33Q8TEY7 942 aa16.15■□□□□ 0.18
SRGAP2C-205ENST00000617209 AZIN2Q96A70 460 aa16.15■□□□□ 0.18
SRGAP2C-205ENST00000617209 ACDQ96AP0 544 aa16.15■□□□□ 0.18
SRGAP2C-205ENST00000617209 PPP1R13BQ96KQ4 1090 aa16.15■□□□□ 0.18
SRGAP2C-205ENST00000617209 XPO6Q96QU8 1125 aaKnown RBP16.15■□□□□ 0.18
SRGAP2C-205ENST00000617209 C2orf42Q9NWW7 574 aa16.15■□□□□ 0.18
SRGAP2C-205ENST00000617209 SFMBT1Q9UHJ3 866 aa16.15■□□□□ 0.18
SRGAP2C-205ENST00000617209 STARD13Q9Y3M8 1113 aa16.15■□□□□ 0.18
SRGAP2C-205ENST00000617209 USP34Q70CQ2 3546 aa16.15■□□□□ 0.18
SRGAP2C-205ENST00000617209 NEDD8-MDP1E9PL57 170 aa16.14■□□□□ 0.17
SRGAP2C-205ENST00000617209 HMBSP08397 361 aa16.14■□□□□ 0.17
SRGAP2C-205ENST00000617209 NCAM1P13591 858 aa16.14■□□□□ 0.17
SRGAP2C-205ENST00000617209 CNR2P34972 360 aa16.14■□□□□ 0.17
SRGAP2C-205ENST00000617209 JAM2P57087 298 aa16.14■□□□□ 0.17
SRGAP2C-205ENST00000617209 ZNF445P59923 1031 aa16.14■□□□□ 0.17
SRGAP2C-205ENST00000617209 UBXN1Q04323 297 aa16.14■□□□□ 0.17
SRGAP2C-205ENST00000617209 MESP2Q0VG99 397 aa16.14■□□□□ 0.17
SRGAP2C-205ENST00000617209 SYCP1Q15431 976 aa16.14■□□□□ 0.17
SRGAP2C-205ENST00000617209 EFHC1Q5JVL4 640 aa16.14■□□□□ 0.17
SRGAP2C-205ENST00000617209 TPGS1Q6ZTW0 290 aa16.14■□□□□ 0.17
SRGAP2C-205ENST00000617209 ZNF677Q86XU0 584 aa16.14■□□□□ 0.17
SRGAP2C-205ENST00000617209 UNC45BQ8IWX7 931 aa16.14■□□□□ 0.17
SRGAP2C-205ENST00000617209 NAT16Q8N8M0 369 aa16.14■□□□□ 0.17
SRGAP2C-205ENST00000617209 TMEM35BQ8NCS4 154 aa16.14■□□□□ 0.17
SRGAP2C-205ENST00000617209 RPLP0P6Q8NHW5 317 aa16.14■□□□□ 0.17
SRGAP2C-205ENST00000617209 DDX1Q92499 740 aaKnown RBP16.14■□□□□ 0.17
SRGAP2C-205ENST00000617209 CPXM1Q96SM3 734 aa16.14■□□□□ 0.17
SRGAP2C-205ENST00000617209 POPDC2Q9HBU9 364 aa16.14■□□□□ 0.17
SRGAP2C-205ENST00000617209 FAM207AQ9NSI2 230 aaPredicted RBP16.14■□□□□ 0.17
SRGAP2C-205ENST00000617209 ASNSD1Q9NWL6 643 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms