RNA–Protein interactions for RNA: ENST00000616002.1

RABGAP1-213, Transcript of RAB GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene RABGAP1, Length 1,595 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGAP1-213ENST00000616002 MRPL47Q9HD33 250 aaKnown RBP11.54□□□□□ -0.56
RABGAP1-213ENST00000616002 NPDC1Q9NQX5 325 aaPredicted RBP11.54□□□□□ -0.56
RABGAP1-213ENST00000616002 CHST7Q9NS84 486 aa11.54□□□□□ -0.56
RABGAP1-213ENST00000616002 USP34Q70CQ2 3546 aa11.54□□□□□ -0.56
RABGAP1-213ENST00000616002 ZFHX2Q9C0A1 2572 aaPredicted RBP11.54□□□□□ -0.56
RABGAP1-213ENST00000616002 ZBTB42B2RXF5 422 aa11.54□□□□□ -0.56
RABGAP1-213ENST00000616002 DNALI1O14645 258 aaPredicted RBP11.54□□□□□ -0.56
RABGAP1-213ENST00000616002 TM9SF1O15321 606 aa11.54□□□□□ -0.56
RABGAP1-213ENST00000616002 TYROBPO43914 113 aa11.54□□□□□ -0.56
RABGAP1-213ENST00000616002 C22orf31O95567 290 aa11.54□□□□□ -0.56
RABGAP1-213ENST00000616002 VTNP04004 478 aa11.54□□□□□ -0.56
RABGAP1-213ENST00000616002 ATP5BP06576 529 aaKnown RBP11.54□□□□□ -0.56
RABGAP1-213ENST00000616002 NEFHP12036 1026 aa11.54□□□□□ -0.56
RABGAP1-213ENST00000616002 SOX11P35716 441 aa11.54□□□□□ -0.56
RABGAP1-213ENST00000616002 MCL1Q07820 350 aa11.54□□□□□ -0.56
RABGAP1-213ENST00000616002 KLC1Q07866 573 aa11.54□□□□□ -0.56
RABGAP1-213ENST00000616002 KRT72Q14CN4 511 aa11.54□□□□□ -0.56
RABGAP1-213ENST00000616002 LIN9Q5TKA1 542 aa11.54□□□□□ -0.56
RABGAP1-213ENST00000616002 FYB2Q5VWT5 728 aa11.54□□□□□ -0.56
RABGAP1-213ENST00000616002 IZUMO3Q5VZ72 239 aa11.54□□□□□ -0.56
RABGAP1-213ENST00000616002 ANO7Q6IWH7 933 aa11.54□□□□□ -0.56
RABGAP1-213ENST00000616002 TRMT1LQ7Z2T5 733 aaKnown RBP11.54□□□□□ -0.56
RABGAP1-213ENST00000616002 PCGF5Q86SE9 256 aa11.54□□□□□ -0.56
RABGAP1-213ENST00000616002 PLPP6Q8IY26 295 aa11.54□□□□□ -0.56
RABGAP1-213ENST00000616002 UBALD2Q8IYN6 164 aa11.54□□□□□ -0.56
RABGAP1-213ENST00000616002 RCOR2Q8IZ40 523 aa11.54□□□□□ -0.56
RABGAP1-213ENST00000616002 FBXL13Q8NEE6 735 aa11.54□□□□□ -0.56
RABGAP1-213ENST00000616002 PARD3BQ8TEW8 1205 aa11.54□□□□□ -0.56
RABGAP1-213ENST00000616002 KCNN1Q92952 543 aa11.54□□□□□ -0.56
RABGAP1-213ENST00000616002 ERP27Q96DN0 273 aa11.54□□□□□ -0.56
RABGAP1-213ENST00000616002 NECTIN4Q96NY8 510 aa11.54□□□□□ -0.56
RABGAP1-213ENST00000616002 NUDCD1Q96RS6 583 aa11.54□□□□□ -0.56
RABGAP1-213ENST00000616002 RBM15Q96T37 977 aaKnown RBP eCLIP11.54□□□□□ -0.56
RABGAP1-213ENST00000616002 LXNQ9BS40 222 aa11.54□□□□□ -0.56
RABGAP1-213ENST00000616002 OSBPL1AQ9BXW6 950 aa11.54□□□□□ -0.56
RABGAP1-213ENST00000616002 VPS11Q9H270 941 aa11.54□□□□□ -0.56
RABGAP1-213ENST00000616002 TRABDQ9H4I3 376 aa11.54□□□□□ -0.56
RABGAP1-213ENST00000616002 C17orf75Q9HAS0 396 aa11.54□□□□□ -0.56
RABGAP1-213ENST00000616002 SPG21Q9NZD8 308 aa11.54□□□□□ -0.56
RABGAP1-213ENST00000616002 TCEAL9Q9UHQ7 104 aa11.54□□□□□ -0.56
RABGAP1-213ENST00000616002 ANAPC7Q9UJX3 599 aa11.54□□□□□ -0.56
RABGAP1-213ENST00000616002 SORCS3Q9UPU3 1222 aa11.54□□□□□ -0.56
RABGAP1-213ENST00000616002 ASB3Q9Y575 518 aa11.54□□□□□ -0.56
RABGAP1-213ENST00000616002 PCDHB2Q9Y5E7 798 aa11.54□□□□□ -0.56
RABGAP1-213ENST00000616002 PTPRZ1P23471 2315 aaPredicted RBP11.53□□□□□ -0.56
RABGAP1-213ENST00000616002 EXOC1LA0A1B0GW35 172 aa11.53□□□□□ -0.56
RABGAP1-213ENST00000616002 A8MUI8 341 aa11.53□□□□□ -0.56
RABGAP1-213ENST00000616002 IPO5O00410 1097 aaKnown RBP11.53□□□□□ -0.56
RABGAP1-213ENST00000616002 GALR2O43603 387 aaPredicted RBP11.53□□□□□ -0.56
RABGAP1-213ENST00000616002 CCDC22O60826 627 aa11.53□□□□□ -0.56
RABGAP1-213ENST00000616002 LILRB3O75022 631 aa11.53□□□□□ -0.56
RABGAP1-213ENST00000616002 GPR32O75388 356 aa11.53□□□□□ -0.56
RABGAP1-213ENST00000616002 FAM155BO75949 473 aa11.53□□□□□ -0.56
RABGAP1-213ENST00000616002 CYP1A1P04798 512 aaPredicted RBP11.53□□□□□ -0.56
RABGAP1-213ENST00000616002 LINGO3P0C6S8 592 aa11.53□□□□□ -0.56
RABGAP1-213ENST00000616002 TROVE2P10155 538 aaKnown RBP eCLIP11.53□□□□□ -0.56
RABGAP1-213ENST00000616002 ATP4AP20648 1035 aa11.53□□□□□ -0.56
RABGAP1-213ENST00000616002 GCAP28676 217 aa11.53□□□□□ -0.56
RABGAP1-213ENST00000616002 VHLP40337 213 aa11.53□□□□□ -0.56
RABGAP1-213ENST00000616002 PBX3P40426 434 aa11.53□□□□□ -0.56
RABGAP1-213ENST00000616002 RAD23BP54727 409 aa11.53□□□□□ -0.56
RABGAP1-213ENST00000616002 CDK18Q07002 472 aa11.53□□□□□ -0.56
RABGAP1-213ENST00000616002 DSC3Q14574 896 aa11.53□□□□□ -0.56
RABGAP1-213ENST00000616002 RBBP5Q15291 538 aaKnown RBP11.53□□□□□ -0.56
RABGAP1-213ENST00000616002 NAIF1Q69YI7 327 aaPredicted RBP11.53□□□□□ -0.56
RABGAP1-213ENST00000616002 ZNF746Q6NUN9 644 aaPredicted RBP11.53□□□□□ -0.56
RABGAP1-213ENST00000616002 HAUS6Q7Z4H7 955 aa11.53□□□□□ -0.56
RABGAP1-213ENST00000616002 LONP2Q86WA8 852 aa11.53□□□□□ -0.56
RABGAP1-213ENST00000616002 PPM1KQ8N3J5 372 aa11.53□□□□□ -0.56
RABGAP1-213ENST00000616002 RNF169Q8NCN4 708 aa11.53□□□□□ -0.56
RABGAP1-213ENST00000616002 RBM41Q96IZ5 413 aaKnown RBP11.53□□□□□ -0.56
RABGAP1-213ENST00000616002 CASD1Q96PB1 797 aa11.53□□□□□ -0.56
RABGAP1-213ENST00000616002 TRAPPC9Q96Q05 1148 aa11.53□□□□□ -0.56
RABGAP1-213ENST00000616002 NTPCRQ9BSD7 190 aaKnown RBP11.53□□□□□ -0.56
RABGAP1-213ENST00000616002 IKZF4Q9H2S9 585 aa11.53□□□□□ -0.56
RABGAP1-213ENST00000616002 PIF1Q9H611 641 aa11.53□□□□□ -0.56
RABGAP1-213ENST00000616002 RAB20Q9NX57 234 aa11.53□□□□□ -0.56
RABGAP1-213ENST00000616002 GGT7Q9UJ14 662 aa11.53□□□□□ -0.56
RABGAP1-213ENST00000616002 SHOC2Q9UQ13 582 aa11.53□□□□□ -0.56
RABGAP1-213ENST00000616002 LRCH1Q9Y2L9 728 aa11.53□□□□□ -0.56
RABGAP1-213ENST00000616002 HCFC2Q9Y5Z7 792 aa11.53□□□□□ -0.56
RABGAP1-213ENST00000616002 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.53□□□□□ -0.56
RABGAP1-213ENST00000616002 SCINQ9Y6U3 715 aa11.53□□□□□ -0.56
RABGAP1-213ENST00000616002 RRM1P23921 792 aa11.52□□□□□ -0.57
RABGAP1-213ENST00000616002 CA8P35219 290 aa11.52□□□□□ -0.57
RABGAP1-213ENST00000616002 NLRP11P59045 1033 aaKnown RBP11.52□□□□□ -0.57
RABGAP1-213ENST00000616002 CLDN10P78369 228 aa11.52□□□□□ -0.57
RABGAP1-213ENST00000616002 SARNPP82979 210 aaKnown RBP11.52□□□□□ -0.57
RABGAP1-213ENST00000616002 SNRNP35Q16560 246 aaKnown RBP11.52□□□□□ -0.57
RABGAP1-213ENST00000616002 EFHC2Q5JST6 749 aa11.52□□□□□ -0.57
RABGAP1-213ENST00000616002 KSR1Q8IVT5 923 aa11.52□□□□□ -0.57
RABGAP1-213ENST00000616002 MRPL43Q8N983 215 aaKnown RBP11.52□□□□□ -0.57
RABGAP1-213ENST00000616002 PLEKHO2Q8TD55 490 aa11.52□□□□□ -0.57
RABGAP1-213ENST00000616002 DNAJC9Q8WXX5 260 aa11.52□□□□□ -0.57
RABGAP1-213ENST00000616002 FAM136AQ96C01 138 aa11.52□□□□□ -0.57
RABGAP1-213ENST00000616002 OSBPL8Q9BZF1 889 aa11.52□□□□□ -0.57
RABGAP1-213ENST00000616002 POMKQ9H5K3 350 aa11.52□□□□□ -0.57
RABGAP1-213ENST00000616002 KIAA1586Q9HCI6 787 aa11.52□□□□□ -0.57
RABGAP1-213ENST00000616002 ANKEF1Q9NU02 776 aa11.52□□□□□ -0.57
RABGAP1-213ENST00000616002 ANKFY1Q9P2R3 1169 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms