RNA–Protein interactions for RNA: ENST00000614659.1

SNPH-203, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,354 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-203ENST00000614659 PPM1LQ5SGD2 360 aa15.16■□□□□ 0.02
SNPH-203ENST00000614659 ERMARDQ5T6L9 678 aa15.16■□□□□ 0.02
SNPH-203ENST00000614659 ZNF555Q8NEP9 628 aa15.16■□□□□ 0.02
SNPH-203ENST00000614659 IPMKQ8NFU5 416 aa15.16■□□□□ 0.02
SNPH-203ENST00000614659 ACTL9Q8TC94 416 aa15.16■□□□□ 0.02
SNPH-203ENST00000614659 USP33Q8TEY7 942 aa15.16■□□□□ 0.02
SNPH-203ENST00000614659 UPF1Q92900 1129 aaKnown RBP eCLIP15.16■□□□□ 0.022e-7■■■■■ 39.3
SNPH-203ENST00000614659 MMADHCQ9H3L0 296 aaPredicted RBP15.16■□□□□ 0.02
SNPH-203ENST00000614659 LRRC19Q9H756 370 aa15.16■□□□□ 0.02
SNPH-203ENST00000614659 SAR1AQ9NR31 198 aa15.16■□□□□ 0.02
SNPH-203ENST00000614659 TBC1D23Q9NUY8 699 aa15.16■□□□□ 0.02
SNPH-203ENST00000614659 GOLGA8TH3BQL2 631 aa15.16■□□□□ 0.02
SNPH-203ENST00000614659 DEAF1O75398 565 aaPredicted RBP15.16■□□□□ 0.02
SNPH-203ENST00000614659 SNHG28P0DPA3 235 aa15.16■□□□□ 0.02
SNPH-203ENST00000614659 PRKAR2AP13861 404 aaKnown RBP15.16■□□□□ 0.02
SNPH-203ENST00000614659 RRP1BQ14684 758 aaKnown RBP15.16■□□□□ 0.02
SNPH-203ENST00000614659 STARD3Q14849 445 aa15.16■□□□□ 0.02
SNPH-203ENST00000614659 CCDC153Q494R4 210 aa15.16■□□□□ 0.02
SNPH-203ENST00000614659 USP6NLQ92738 828 aa15.16■□□□□ 0.02
SNPH-203ENST00000614659 ACSF2Q96CM8 615 aaPredicted RBP15.16■□□□□ 0.02
SNPH-203ENST00000614659 ABCF3Q9NUQ8 709 aa15.16■□□□□ 0.02
SNPH-203ENST00000614659 TEKT2Q9UIF3 430 aa15.16■□□□□ 0.02
SNPH-203ENST00000614659 SLC39A10Q9ULF5 831 aa15.16■□□□□ 0.02
SNPH-203ENST00000614659 CCDC85CA6NKD9 419 aa15.16■□□□□ 0.02
SNPH-203ENST00000614659 TMA16Q96EY4 203 aaKnown RBP15.16■□□□□ 0.02
SNPH-203ENST00000614659 ATP6V1G2O95670 118 aa15.16■□□□□ 0.02
SNPH-203ENST00000614659 TRIP10Q15642 601 aa15.16■□□□□ 0.02
SNPH-203ENST00000614659 PLPPR4Q7Z2D5 763 aa15.16■□□□□ 0.02
SNPH-203ENST00000614659 KIAA2013Q8IYS2 634 aa15.16■□□□□ 0.02
SNPH-203ENST00000614659 TMEM86AQ8N2M4 240 aa15.16■□□□□ 0.02
SNPH-203ENST00000614659 TSEN2Q8NCE0 465 aaKnown RBP15.16■□□□□ 0.02
SNPH-203ENST00000614659 CINPQ9BW66 212 aaPredicted RBP15.16■□□□□ 0.02
SNPH-203ENST00000614659 TMEM120AQ9BXJ8 343 aa15.16■□□□□ 0.02
SNPH-203ENST00000614659 PORCNQ9H237 461 aa15.16■□□□□ 0.02
SNPH-203ENST00000614659 CYP39A1Q9NYL5 469 aa15.16■□□□□ 0.02
SNPH-203ENST00000614659 SYNCRIPO60506 623 aaKnown RBP15.15■□□□□ 0.02
SNPH-203ENST00000614659 TTMPQ5BVD1 217 aa15.15■□□□□ 0.02
SNPH-203ENST00000614659 GRTP1Q5TC63 336 aa15.15■□□□□ 0.02
SNPH-203ENST00000614659 SCUBE1Q8IWY4 988 aa15.15■□□□□ 0.02
SNPH-203ENST00000614659 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.15■□□□□ 0.02
SNPH-203ENST00000614659 AGR3Q8TD06 166 aa15.15■□□□□ 0.02
SNPH-203ENST00000614659 EME1Q96AY2 570 aa15.15■□□□□ 0.02
SNPH-203ENST00000614659 RWDD3Q9Y3V2 267 aa15.15■□□□□ 0.02
SNPH-203ENST00000614659 APOC4-APOC2K7ER74 178 aa15.15■□□□□ 0.02
SNPH-203ENST00000614659 DAB1O75553 588 aa15.15■□□□□ 0.02
SNPH-203ENST00000614659 APOC2P02655 101 aa15.15■□□□□ 0.02
SNPH-203ENST00000614659 EPHB2P29323 1055 aa15.15■□□□□ 0.02
SNPH-203ENST00000614659 GRK4P32298 578 aa15.15■□□□□ 0.02
SNPH-203ENST00000614659 NCKAP1LP55160 1127 aa15.15■□□□□ 0.02
SNPH-203ENST00000614659 MRPS6P82932 125 aaKnown RBP15.15■□□□□ 0.02
SNPH-203ENST00000614659 CYLC2Q14093 348 aaPredicted RBP15.15■□□□□ 0.02
SNPH-203ENST00000614659 CYTH1Q15438 398 aa15.15■□□□□ 0.02
SNPH-203ENST00000614659 TRMT5Q32P41 509 aaKnown RBP15.15■□□□□ 0.02
SNPH-203ENST00000614659 ACOT1Q86TX2 421 aa15.15■□□□□ 0.02
SNPH-203ENST00000614659 LNX1Q8TBB1 728 aaPredicted RBP15.15■□□□□ 0.02
SNPH-203ENST00000614659 EVA1BQ9NVM1 165 aa15.15■□□□□ 0.02
SNPH-203ENST00000614659 ZNF229Q9UJW7 825 aa15.15■□□□□ 0.02
SNPH-203ENST00000614659 PLIN4Q96Q06 1357 aa15.15■□□□□ 0.02
SNPH-203ENST00000614659 PDE2AO00408 941 aaPredicted RBP15.15■□□□□ 0.02
SNPH-203ENST00000614659 SOAT2O75908 522 aa15.15■□□□□ 0.02
SNPH-203ENST00000614659 CKBP12277 381 aa15.15■□□□□ 0.02
SNPH-203ENST00000614659 PTK2BQ14289 1009 aa15.15■□□□□ 0.02
SNPH-203ENST00000614659 AARS2Q5JTZ9 985 aaKnown RBP15.15■□□□□ 0.02
SNPH-203ENST00000614659 OVOS1Q6IE37 1185 aa15.15■□□□□ 0.02
SNPH-203ENST00000614659 MRNIPQ6NTE8 343 aa15.15■□□□□ 0.02
SNPH-203ENST00000614659 CSGALNACT1Q8TDX6 532 aa15.15■□□□□ 0.02
SNPH-203ENST00000614659 ANKRD6Q9Y2G4 727 aa15.15■□□□□ 0.02
SNPH-203ENST00000614659 AIM2O14862 343 aa15.15■□□□□ 0.02
SNPH-203ENST00000614659 SUPT3HO75486 399 aa15.15■□□□□ 0.02
SNPH-203ENST00000614659 UBOX5O94941 541 aa15.15■□□□□ 0.02
SNPH-203ENST00000614659 CYP2F1P24903 491 aa15.15■□□□□ 0.02
SNPH-203ENST00000614659 TRPC1P48995 793 aa15.15■□□□□ 0.02
SNPH-203ENST00000614659 KCNK10P57789 538 aa15.15■□□□□ 0.02
SNPH-203ENST00000614659 PABPC1LQ4VXU2 614 aaKnown RBP15.15■□□□□ 0.02
SNPH-203ENST00000614659 SPANXN3Q5MJ09 141 aa15.15■□□□□ 0.02
SNPH-203ENST00000614659 SPRYD7Q5W111 196 aa15.15■□□□□ 0.02
SNPH-203ENST00000614659 OR9Q1Q8NGQ5 310 aa15.15■□□□□ 0.02
SNPH-203ENST00000614659 ADAM33Q9BZ11 813 aa15.15■□□□□ 0.02
SNPH-203ENST00000614659 PHACTR1Q9C0D0 580 aa15.15■□□□□ 0.02
SNPH-203ENST00000614659 DDIT4Q9NX09 232 aa15.15■□□□□ 0.02
SNPH-203ENST00000614659 HNRNPCL2B2RXH8 293 aa15.14■□□□□ 0.01
SNPH-203ENST00000614659 PGAM1P18669 254 aa15.14■□□□□ 0.01
SNPH-203ENST00000614659 OOSP2Q86WS3 158 aa15.14■□□□□ 0.01
SNPH-203ENST00000614659 FIBCD1Q8N539 461 aa15.14■□□□□ 0.01
SNPH-203ENST00000614659 DDI1Q8WTU0 396 aa15.14■□□□□ 0.01
SNPH-203ENST00000614659 PABPC5Q96DU9 382 aaKnown RBP15.14■□□□□ 0.01
SNPH-203ENST00000614659 SPATA16Q9BXB7 569 aa15.14■□□□□ 0.01
SNPH-203ENST00000614659 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.14■□□□□ 0.01
SNPH-203ENST00000614659 COL1A2P08123 1366 aa15.14■□□□□ 0.01
SNPH-203ENST00000614659 RBP1P09455 135 aa15.14■□□□□ 0.01
SNPH-203ENST00000614659 PSMD7P51665 324 aa15.14■□□□□ 0.01
SNPH-203ENST00000614659 ITGB3BPQ13352 177 aaPredicted RBP15.14■□□□□ 0.01
SNPH-203ENST00000614659 LBRQ14739 615 aaKnown RBP15.14■□□□□ 0.01
SNPH-203ENST00000614659 THEMIS2Q5TEJ8 643 aa15.14■□□□□ 0.01
SNPH-203ENST00000614659 ART4Q93070 314 aa15.14■□□□□ 0.01
SNPH-203ENST00000614659 HAO1Q9UJM8 370 aa15.14■□□□□ 0.01
SNPH-203ENST00000614659 TRHDEQ9UKU6 1024 aa15.14■□□□□ 0.01
SNPH-203ENST00000614659 SLC9A3R1O14745 358 aaPredicted RBP15.14■□□□□ 0.01
SNPH-203ENST00000614659 VCLP18206 1134 aa15.14■□□□□ 0.01
SNPH-203ENST00000614659 AKT1P31749 480 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms