RNA–Protein interactions for RNA: ENST00000614502.4

PDLIM2-218, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-218ENST00000614502 OLA1Q9NTK5 396 aaKnown RBP12.76□□□□□ -0.37
PDLIM2-218ENST00000614502 OSER1Q9NX31 292 aa12.76□□□□□ -0.37
PDLIM2-218ENST00000614502 HESX1Q9UBX0 185 aa12.76□□□□□ -0.37
PDLIM2-218ENST00000614502 EVLQ9UI08 416 aaPredicted RBP12.76□□□□□ -0.37
PDLIM2-218ENST00000614502 KIAA1257Q9ULG3 409 aa12.76□□□□□ -0.37
PDLIM2-218ENST00000614502 COQ4Q9Y3A0 265 aa12.76□□□□□ -0.37
PDLIM2-218ENST00000614502 FAM208BQ5VWN6 2430 aa12.76□□□□□ -0.37
PDLIM2-218ENST00000614502 AKAP13Q12802 2813 aa12.75□□□□□ -0.37
PDLIM2-218ENST00000614502 ZZEF1O43149 2961 aa12.75□□□□□ -0.37
PDLIM2-218ENST00000614502 LNP1A1A4G5 178 aa12.75□□□□□ -0.37
PDLIM2-218ENST00000614502 PSMA7O14818 248 aa12.75□□□□□ -0.37
PDLIM2-218ENST00000614502 GREM1O60565 184 aa12.75□□□□□ -0.37
PDLIM2-218ENST00000614502 ADAM23O75077 832 aa12.75□□□□□ -0.37
PDLIM2-218ENST00000614502 STC2O76061 302 aa12.75□□□□□ -0.37
PDLIM2-218ENST00000614502 CYBBP04839 570 aa12.75□□□□□ -0.37
PDLIM2-218ENST00000614502 HNRNPLP14866 589 aaKnown RBP eCLIP12.75□□□□□ -0.37
PDLIM2-218ENST00000614502 HOXD12P35452 270 aa12.75□□□□□ -0.37
PDLIM2-218ENST00000614502 ZNF132P52740 706 aa12.75□□□□□ -0.37
PDLIM2-218ENST00000614502 RAD23BP54727 409 aa12.75□□□□□ -0.37
PDLIM2-218ENST00000614502 CETN1Q12798 172 aa12.75□□□□□ -0.37
PDLIM2-218ENST00000614502 SGO2Q562F6 1265 aa12.75□□□□□ -0.37
PDLIM2-218ENST00000614502 RAB41Q5JT25 222 aa12.75□□□□□ -0.37
PDLIM2-218ENST00000614502 Q6ZNB5 142 aa12.75□□□□□ -0.37
PDLIM2-218ENST00000614502 RSRC2Q7L4I2 434 aaKnown RBP12.75□□□□□ -0.37
PDLIM2-218ENST00000614502 ZC3H3Q8IXZ2 948 aaKnown RBP12.75□□□□□ -0.37
PDLIM2-218ENST00000614502 CHPFQ8IZ52 775 aa12.75□□□□□ -0.37
PDLIM2-218ENST00000614502 SLC4A11Q8NBS3 891 aa12.75□□□□□ -0.37
PDLIM2-218ENST00000614502 CEP76Q8TAP6 659 aa12.75□□□□□ -0.37
PDLIM2-218ENST00000614502 UCMAQ8WVF2 138 aa12.75□□□□□ -0.37
PDLIM2-218ENST00000614502 SEMA4DQ92854 862 aa12.75□□□□□ -0.37
PDLIM2-218ENST00000614502 TMEM9BQ9NQ34 198 aa12.75□□□□□ -0.37
PDLIM2-218ENST00000614502 ARMCX3Q9UH62 379 aaPredicted RBP12.75□□□□□ -0.37
PDLIM2-218ENST00000614502 RASAL2Q9UJF2 1139 aa12.75□□□□□ -0.37
PDLIM2-218ENST00000614502 ASPMQ8IZT6 3477 aa12.74□□□□□ -0.37
PDLIM2-218ENST00000614502 C4orf47A7E2U8 309 aa12.74□□□□□ -0.37
PDLIM2-218ENST00000614502 PATE3B3GLJ2 98 aa12.74□□□□□ -0.37
PDLIM2-218ENST00000614502 XPO1O14980 1071 aaKnown RBP12.74□□□□□ -0.37
PDLIM2-218ENST00000614502 CHRM1P11229 460 aaPredicted RBP12.74□□□□□ -0.37
PDLIM2-218ENST00000614502 PGFP49763 221 aa12.74□□□□□ -0.37
PDLIM2-218ENST00000614502 NOVA1P51513 510 aaKnown RBP12.74□□□□□ -0.37
PDLIM2-218ENST00000614502 BCAT1P54687 386 aa12.74□□□□□ -0.37
PDLIM2-218ENST00000614502 ZNF445P59923 1031 aa12.74□□□□□ -0.37
PDLIM2-218ENST00000614502 SCD5Q86SK9 330 aa12.74□□□□□ -0.37
PDLIM2-218ENST00000614502 PIGZQ86VD9 579 aa12.74□□□□□ -0.37
PDLIM2-218ENST00000614502 MIB1Q86YT6 1006 aa12.74□□□□□ -0.37
PDLIM2-218ENST00000614502 SYT12Q8IV01 421 aa12.74□□□□□ -0.37
PDLIM2-218ENST00000614502 SMYD4Q8IYR2 804 aaPredicted RBP12.74□□□□□ -0.37
PDLIM2-218ENST00000614502 PIGKQ92643 395 aa12.74□□□□□ -0.37
PDLIM2-218ENST00000614502 WBP2Q969T9 261 aa12.74□□□□□ -0.37
PDLIM2-218ENST00000614502 PLD4Q96BZ4 506 aa12.74□□□□□ -0.37
PDLIM2-218ENST00000614502 DHTKD1Q96HY7 919 aaPredicted RBP12.74□□□□□ -0.37
PDLIM2-218ENST00000614502 CEP63Q96MT8 703 aa12.74□□□□□ -0.37
PDLIM2-218ENST00000614502 LRRC4Q9HBW1 653 aa12.74□□□□□ -0.37
PDLIM2-218ENST00000614502 NUDT5Q9UKK9 219 aa12.74□□□□□ -0.37
PDLIM2-218ENST00000614502 SLC27A6Q9Y2P4 619 aa12.74□□□□□ -0.37
PDLIM2-218ENST00000614502 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.73□□□□□ -0.37
PDLIM2-218ENST00000614502 MDM4O15151 490 aa12.73□□□□□ -0.37
PDLIM2-218ENST00000614502 TOP3BO95985 862 aaKnown RBP12.73□□□□□ -0.37
PDLIM2-218ENST00000614502 ZBED1O96006 694 aa12.73□□□□□ -0.37
PDLIM2-218ENST00000614502 VDRP11473 427 aa12.73□□□□□ -0.37
PDLIM2-218ENST00000614502 GABRG2P18507 467 aa12.73□□□□□ -0.37
PDLIM2-218ENST00000614502 SPINK2P20155 84 aa12.73□□□□□ -0.37
PDLIM2-218ENST00000614502 YWHAGP61981 247 aaKnown RBP eCLIP12.73□□□□□ -0.37
PDLIM2-218ENST00000614502 BST2Q10589 180 aaKnown RBP12.73□□□□□ -0.37
PDLIM2-218ENST00000614502 EFEMP1Q12805 493 aa12.73□□□□□ -0.37
PDLIM2-218ENST00000614502 CUL2Q13617 745 aa12.73□□□□□ -0.37
PDLIM2-218ENST00000614502 STARD3Q14849 445 aa12.73□□□□□ -0.37
PDLIM2-218ENST00000614502 MAP7D1Q3KQU3 841 aa12.73□□□□□ -0.37
PDLIM2-218ENST00000614502 LYSMD4Q5XG99 296 aa12.73□□□□□ -0.37
PDLIM2-218ENST00000614502 ANKRD40Q6AI12 368 aa12.73□□□□□ -0.37
PDLIM2-218ENST00000614502 PM20D1Q6GTS8 502 aa12.73□□□□□ -0.37
PDLIM2-218ENST00000614502 TMEFF1Q8IYR6 380 aa12.73□□□□□ -0.37
PDLIM2-218ENST00000614502 CPXM2Q8N436 756 aa12.73□□□□□ -0.37
PDLIM2-218ENST00000614502 FRMD1Q8N878 549 aa12.73□□□□□ -0.37
PDLIM2-218ENST00000614502 IPO4Q8TEX9 1081 aaKnown RBP12.73□□□□□ -0.37
PDLIM2-218ENST00000614502 RNF139Q8WU17 664 aa12.73□□□□□ -0.37
PDLIM2-218ENST00000614502 RLN3Q8WXF3 142 aa12.73□□□□□ -0.37
PDLIM2-218ENST00000614502 ERCC4Q92889 916 aaPredicted RBP12.73□□□□□ -0.37
PDLIM2-218ENST00000614502 TATDN2Q93075 761 aa12.73□□□□□ -0.37
PDLIM2-218ENST00000614502 EEF2KMTQ96G04 330 aa12.73□□□□□ -0.37
PDLIM2-218ENST00000614502 GABRG3Q99928 467 aa12.73□□□□□ -0.37
PDLIM2-218ENST00000614502 SLC2A11Q9BYW1 496 aa12.73□□□□□ -0.37
PDLIM2-218ENST00000614502 ZDHHC4Q9NPG8 344 aa12.73□□□□□ -0.37
PDLIM2-218ENST00000614502 LMBRD1Q9NUN5 540 aa12.73□□□□□ -0.37
PDLIM2-218ENST00000614502 MARCH2Q9P0N8 246 aa12.73□□□□□ -0.37
PDLIM2-218ENST00000614502 FBXO10Q9UK96 956 aa12.73□□□□□ -0.37
PDLIM2-218ENST00000614502 ZFYVE26Q68DK2 2539 aa12.72□□□□□ -0.37
PDLIM2-218ENST00000614502 SPEGQ15772 3267 aa12.72□□□□□ -0.37
PDLIM2-218ENST00000614502 BICDL2A1A5D9 508 aa12.72□□□□□ -0.37
PDLIM2-218ENST00000614502 C1QTNF9BB2RNN3 333 aa12.72□□□□□ -0.37
PDLIM2-218ENST00000614502 PMM2O15305 246 aa12.72□□□□□ -0.37
PDLIM2-218ENST00000614502 NDUFS2O75306 463 aa12.72□□□□□ -0.37
PDLIM2-218ENST00000614502 PENKP01210 267 aaPredicted RBP12.72□□□□□ -0.37
PDLIM2-218ENST00000614502 C1QTNF9P0C862 333 aa12.72□□□□□ -0.37
PDLIM2-218ENST00000614502 SETSIPP0DME0 302 aa12.72□□□□□ -0.37
PDLIM2-218ENST00000614502 CORO1AP31146 461 aaKnown RBP12.72□□□□□ -0.37
PDLIM2-218ENST00000614502 HARS2P49590 506 aaKnown RBP12.72□□□□□ -0.37
PDLIM2-218ENST00000614502 TKTL1P51854 596 aa12.72□□□□□ -0.37
PDLIM2-218ENST00000614502 RPL6Q02878 288 aaKnown RBP12.72□□□□□ -0.37
PDLIM2-218ENST00000614502 EIF4HQ15056 248 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms