RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 GFRA2O00451 464 aa24.69■■□□□ 1.54
MMP28-203ENST00000612672 EXOC3O60645 756 aa24.69■■□□□ 1.54
MMP28-203ENST00000612672 NCAM1P13591 858 aa24.69■■□□□ 1.54
MMP28-203ENST00000612672 ASPAP45381 313 aa24.69■■□□□ 1.54
MMP28-203ENST00000612672 SNRPFP62306 86 aaKnown RBP24.69■■□□□ 1.54
MMP28-203ENST00000612672 STK38Q15208 465 aa24.69■■□□□ 1.54
MMP28-203ENST00000612672 WDR45BQ5MNZ6 344 aa24.69■■□□□ 1.54
MMP28-203ENST00000612672 SYCP2LQ5T4T6 812 aa24.69■■□□□ 1.54
MMP28-203ENST00000612672 FYB2Q5VWT5 728 aa24.69■■□□□ 1.54
MMP28-203ENST00000612672 SCD5Q86SK9 330 aa24.69■■□□□ 1.54
MMP28-203ENST00000612672 GLRX5Q86SX6 157 aa24.69■■□□□ 1.54
MMP28-203ENST00000612672 CACUL1Q86Y37 369 aa24.69■■□□□ 1.54
MMP28-203ENST00000612672 SPRYD3Q8NCJ5 442 aa24.69■■□□□ 1.54
MMP28-203ENST00000612672 FOXJ1Q92949 421 aa24.69■■□□□ 1.54
MMP28-203ENST00000612672 CUEDC2Q9H467 287 aa24.69■■□□□ 1.54
MMP28-203ENST00000612672 CCDC86Q9H6F5 360 aaKnown RBP24.69■■□□□ 1.54
MMP28-203ENST00000612672 PRDM16Q9HAZ2 1276 aa24.69■■□□□ 1.54
MMP28-203ENST00000612672 UTP3Q9NQZ2 479 aaKnown RBP eCLIP24.69■■□□□ 1.54
MMP28-203ENST00000612672 LSM7Q9UK45 103 aaKnown RBP24.69■■□□□ 1.54
MMP28-203ENST00000612672 CLEC4EQ9ULY5 219 aa24.69■■□□□ 1.54
MMP28-203ENST00000612672 RAXQ9Y2V3 346 aa24.69■■□□□ 1.54
MMP28-203ENST00000612672 HELZ2Q9BYK8 2649 aaKnown RBP24.68■■□□□ 1.54
MMP28-203ENST00000612672 A0A1B0GTW7 788 aa24.68■■□□□ 1.54
MMP28-203ENST00000612672 MEI4A8MW99 385 aa24.68■■□□□ 1.54
MMP28-203ENST00000612672 ZBTB24O43167 697 aaPredicted RBP24.68■■□□□ 1.54
MMP28-203ENST00000612672 STC2O76061 302 aa24.68■■□□□ 1.54
MMP28-203ENST00000612672 RARGP13631 454 aa24.68■■□□□ 1.54
MMP28-203ENST00000612672 GNSP15586 552 aa24.68■■□□□ 1.54
MMP28-203ENST00000612672 MFAP3P55082 362 aa24.68■■□□□ 1.54
MMP28-203ENST00000612672 ENPP2Q13822 863 aa24.68■■□□□ 1.54
MMP28-203ENST00000612672 DCAF12L1Q5VU92 463 aa24.68■■□□□ 1.54
MMP28-203ENST00000612672 METTL3Q86U44 580 aaKnown RBP24.68■■□□□ 1.54
MMP28-203ENST00000612672 RBBP8NLQ8NC74 664 aaPredicted RBP24.68■■□□□ 1.54
MMP28-203ENST00000612672 LRRC27Q9C0I9 530 aa24.68■■□□□ 1.54
MMP28-203ENST00000612672 MIR1-1HGQ9H1L0 117 aa24.68■■□□□ 1.54
MMP28-203ENST00000612672 ITM2CQ9NQX7 267 aa24.68■■□□□ 1.54
MMP28-203ENST00000612672 KALRNO60229 2985 aa24.68■■□□□ 1.54
MMP28-203ENST00000612672 SPTLC2O15270 562 aa24.67■■□□□ 1.54
MMP28-203ENST00000612672 PENKP01210 267 aaPredicted RBP24.67■■□□□ 1.54
MMP28-203ENST00000612672 FAM200BP0CF97 657 aa24.67■■□□□ 1.54
MMP28-203ENST00000612672 ACO1P21399 889 aaKnown RBP24.67■■□□□ 1.54
MMP28-203ENST00000612672 TPMTP51580 245 aa24.67■■□□□ 1.54
MMP28-203ENST00000612672 COPAP53621 1224 aa24.67■■□□□ 1.54
MMP28-203ENST00000612672 CUL4BQ13620 913 aa24.67■■□□□ 1.54
MMP28-203ENST00000612672 C1orf220Q5T0J3 134 aa24.67■■□□□ 1.54
MMP28-203ENST00000612672 GRAMD1CQ8IYS0 662 aa24.67■■□□□ 1.54
MMP28-203ENST00000612672 C1orf216Q8TAB5 229 aa24.67■■□□□ 1.54
MMP28-203ENST00000612672 GAREM1Q9H706 876 aa24.67■■□□□ 1.54
MMP28-203ENST00000612672 FOXD4L1Q9NU39 408 aa24.67■■□□□ 1.54
MMP28-203ENST00000612672 THAP10Q9P2Z0 257 aaPredicted RBP24.67■■□□□ 1.54
MMP28-203ENST00000612672 TFIP11Q9UBB9 837 aaKnown RBP24.67■■□□□ 1.54
MMP28-203ENST00000612672 SLC27A6Q9Y2P4 619 aa24.67■■□□□ 1.54
MMP28-203ENST00000612672 URB1O60287 2271 aaKnown RBP24.66■■□□□ 1.54
MMP28-203ENST00000612672 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP24.66■■□□□ 1.54
MMP28-203ENST00000612672 CILPO75339 1184 aa24.66■■□□□ 1.54
MMP28-203ENST00000612672 PRKCHP24723 683 aa24.66■■□□□ 1.54
MMP28-203ENST00000612672 KNOP1Q1ED39 458 aaKnown RBP24.66■■□□□ 1.54
MMP28-203ENST00000612672 HNRNPLLQ8WVV9 542 aaKnown RBP24.66■■□□□ 1.54
MMP28-203ENST00000612672 SORCS1Q8WY21 1168 aa24.66■■□□□ 1.54
MMP28-203ENST00000612672 ZDHHC5Q9C0B5 715 aa24.66■■□□□ 1.54
MMP28-203ENST00000612672 DMAC2Q9NW81 257 aa24.66■■□□□ 1.54
MMP28-203ENST00000612672 BTBD3Q9Y2F9 522 aa24.66■■□□□ 1.54
MMP28-203ENST00000612672 DKK1O94907 266 aa24.65■■□□□ 1.54
MMP28-203ENST00000612672 ATXN1LP0C7T5 689 aaKnown RBP24.65■■□□□ 1.54
MMP28-203ENST00000612672 AMPD3Q01432 767 aa24.65■■□□□ 1.54
MMP28-203ENST00000612672 ZACNQ401N2 412 aa24.65■■□□□ 1.54
MMP28-203ENST00000612672 C10orf120Q5SQS8 335 aa24.65■■□□□ 1.54
MMP28-203ENST00000612672 TMEM215Q68D42 235 aa24.65■■□□□ 1.54
MMP28-203ENST00000612672 KLHDC10Q6PID8 442 aa24.65■■□□□ 1.54
MMP28-203ENST00000612672 SETD7Q8WTS6 366 aaKnown RBP24.65■■□□□ 1.54
MMP28-203ENST00000612672 PIWIL1Q96J94 861 aaKnown RBP24.65■■□□□ 1.54
MMP28-203ENST00000612672 HNRNPABQ99729 332 aaKnown RBP24.65■■□□□ 1.54
MMP28-203ENST00000612672 TM7SF3Q9NS93 570 aa24.65■■□□□ 1.54
MMP28-203ENST00000612672 DNMT3LQ9UJW3 386 aa24.65■■□□□ 1.54
MMP28-203ENST00000612672 APOBEC2Q9Y235 224 aaKnown RBP24.65■■□□□ 1.54
MMP28-203ENST00000612672 PPP6R2O75170 966 aa24.64■■□□□ 1.54
MMP28-203ENST00000612672 ASS1P00966 412 aaKnown RBP24.64■■□□□ 1.54
MMP28-203ENST00000612672 GOLGA8FQ08AF8 430 aa24.64■■□□□ 1.54
MMP28-203ENST00000612672 GOLGA8DPQ0D2H9 430 aa24.64■■□□□ 1.54
MMP28-203ENST00000612672 ZNF234Q14588 700 aa24.64■■□□□ 1.54
MMP28-203ENST00000612672 STARD3Q14849 445 aa24.64■■□□□ 1.54
MMP28-203ENST00000612672 HLA-BQ31612 363 aa24.64■■□□□ 1.54
MMP28-203ENST00000612672 UNC93AQ86WB7 457 aa24.64■■□□□ 1.54
MMP28-203ENST00000612672 TMPRSS6Q8IU80 811 aa24.64■■□□□ 1.54
MMP28-203ENST00000612672 IQUBQ8NA54 791 aa24.64■■□□□ 1.54
MMP28-203ENST00000612672 KIAA0895Q8NCT3 520 aa24.64■■□□□ 1.54
MMP28-203ENST00000612672 CADM4Q8NFZ8 388 aa24.64■■□□□ 1.54
MMP28-203ENST00000612672 CRELD1Q96HD1 420 aa24.64■■□□□ 1.54
MMP28-203ENST00000612672 APOBEC3GQ9HC16 384 aaKnown RBP24.64■■□□□ 1.54
MMP28-203ENST00000612672 CGNQ9P2M7 1197 aaKnown RBP24.64■■□□□ 1.54
MMP28-203ENST00000612672 EIF2B4Q9UI10 523 aaKnown RBP24.64■■□□□ 1.54
MMP28-203ENST00000612672 NAGPAQ9UK23 515 aa24.64■■□□□ 1.54
MMP28-203ENST00000612672 NFE2L3Q9Y4A8 694 aa24.64■■□□□ 1.54
MMP28-203ENST00000612672 A0A1B0GVT2 93 aa24.63■■□□□ 1.53
MMP28-203ENST00000612672 METTL12A8MUP2 240 aa24.63■■□□□ 1.53
MMP28-203ENST00000612672 BCAT2O15382 392 aaPredicted RBP24.63■■□□□ 1.53
MMP28-203ENST00000612672 POLR2DO15514 142 aaKnown RBP24.63■■□□□ 1.53
MMP28-203ENST00000612672 KLRC4O43908 158 aa24.63■■□□□ 1.53
MMP28-203ENST00000612672 IGLV3-19P01714 112 aa24.63■■□□□ 1.53
MMP28-203ENST00000612672 HMBSP08397 361 aa24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms