RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 ANKS3Q6ZW76 656 aa9.29□□□□□ -0.92
CCDC47-207ENST00000612558 VSIG1Q86XK7 387 aa9.29□□□□□ -0.92
CCDC47-207ENST00000612558 ATG4AQ8WYN0 398 aa9.29□□□□□ -0.92
CCDC47-207ENST00000612558 NPY6RQ99463 290 aa9.29□□□□□ -0.92
CCDC47-207ENST00000612558 TRIM51Q9BSJ1 452 aa9.29□□□□□ -0.92
CCDC47-207ENST00000612558 TTPALQ9BTX7 342 aa9.29□□□□□ -0.92
CCDC47-207ENST00000612558 TRIM62Q9BVG3 475 aa9.29□□□□□ -0.92
CCDC47-207ENST00000612558 MAK16Q9BXY0 300 aaKnown RBP9.29□□□□□ -0.92
CCDC47-207ENST00000612558 FRMD8P1Q9BZ68 369 aaPredicted RBP9.29□□□□□ -0.92
CCDC47-207ENST00000612558 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.29□□□□□ -0.92
CCDC47-207ENST00000612558 ABI2Q9NYB9 513 aaPredicted RBP9.29□□□□□ -0.92
CCDC47-207ENST00000612558 NFU1Q9UMS0 254 aa9.29□□□□□ -0.92
CCDC47-207ENST00000612558 PCDHB5Q9Y5E4 795 aa9.29□□□□□ -0.92
CCDC47-207ENST00000612558 USP3Q9Y6I4 520 aa9.29□□□□□ -0.92
CCDC47-207ENST00000612558 MAP2K7O14733 419 aa9.28□□□□□ -0.92
CCDC47-207ENST00000612558 TNFRSF10BO14763 440 aa9.28□□□□□ -0.92
CCDC47-207ENST00000612558 DAPK3O43293 454 aa9.28□□□□□ -0.92
CCDC47-207ENST00000612558 LIASO43766 372 aa9.28□□□□□ -0.92
CCDC47-207ENST00000612558 TBC1D4O60343 1298 aa9.28□□□□□ -0.92
CCDC47-207ENST00000612558 CST8O60676 142 aa9.28□□□□□ -0.92
CCDC47-207ENST00000612558 GAS8O95995 478 aa9.28□□□□□ -0.92
CCDC47-207ENST00000612558 FYNP06241 537 aa9.28□□□□□ -0.92
CCDC47-207ENST00000612558 CCNYL3P0C7X3 344 aa9.28□□□□□ -0.92
CCDC47-207ENST00000612558 GBP1P32455 592 aa9.28□□□□□ -0.92
CCDC47-207ENST00000612558 RDXP35241 583 aaKnown RBP9.28□□□□□ -0.92
CCDC47-207ENST00000612558 PBX3P40426 434 aa9.28□□□□□ -0.92
CCDC47-207ENST00000612558 MAGEA11P43364 429 aa9.28□□□□□ -0.92
CCDC47-207ENST00000612558 NNTQ13423 1086 aa9.28□□□□□ -0.92
CCDC47-207ENST00000612558 BYSLQ13895 437 aaKnown RBP9.28□□□□□ -0.92
CCDC47-207ENST00000612558 TFDP2Q14188 446 aa9.28□□□□□ -0.92
CCDC47-207ENST00000612558 DPYSL3Q14195 570 aa9.28□□□□□ -0.92
CCDC47-207ENST00000612558 HLTFQ14527 1009 aaKnown RBP eCLIP9.28□□□□□ -0.92
CCDC47-207ENST00000612558 CASP8Q14790 479 aa9.28□□□□□ -0.92
CCDC47-207ENST00000612558 PPP1R7Q15435 360 aa9.28□□□□□ -0.92
CCDC47-207ENST00000612558 SYPL2Q5VXT5 272 aa9.28□□□□□ -0.92
CCDC47-207ENST00000612558 HFE2Q6ZVN8 426 aa9.28□□□□□ -0.92
CCDC47-207ENST00000612558 BEND5Q7L4P6 421 aa9.28□□□□□ -0.92
CCDC47-207ENST00000612558 BNIPLQ7Z465 357 aa9.28□□□□□ -0.92
CCDC47-207ENST00000612558 DDX42Q86XP3 938 aaKnown RBP eCLIP9.28□□□□□ -0.92
CCDC47-207ENST00000612558 RFX6Q8HWS3 928 aa9.28□□□□□ -0.92
CCDC47-207ENST00000612558 PSTKQ8IV42 348 aaKnown RBP9.28□□□□□ -0.92
CCDC47-207ENST00000612558 GSPT2Q8IYD1 628 aaKnown RBP9.28□□□□□ -0.92
CCDC47-207ENST00000612558 FAM71BQ8TC56 605 aa9.28□□□□□ -0.92
CCDC47-207ENST00000612558 CAVIN3Q969G5 261 aa9.28□□□□□ -0.92
CCDC47-207ENST00000612558 ZNF689Q96CS4 500 aaPredicted RBP9.28□□□□□ -0.92
CCDC47-207ENST00000612558 C8orf48Q96LL4 319 aa9.28□□□□□ -0.92
CCDC47-207ENST00000612558 SNRNP25Q9BV90 132 aaKnown RBP9.28□□□□□ -0.92
CCDC47-207ENST00000612558 CALN1Q9BXU9 219 aa9.28□□□□□ -0.92
CCDC47-207ENST00000612558 CWH43Q9H720 699 aa9.28□□□□□ -0.92
CCDC47-207ENST00000612558 NAALADL1Q9UQQ1 740 aa9.28□□□□□ -0.92
CCDC47-207ENST00000612558 DRG1Q9Y295 367 aaKnown RBP9.28□□□□□ -0.92
CCDC47-207ENST00000612558 LTBP2Q14767 1821 aa9.27□□□□□ -0.93
CCDC47-207ENST00000612558 CARNS1A5YM72 827 aa9.27□□□□□ -0.93
CCDC47-207ENST00000612558 ZNF487B1APH4 448 aa9.27□□□□□ -0.93
CCDC47-207ENST00000612558 APOC4-APOC2K7ER74 178 aa9.27□□□□□ -0.93
CCDC47-207ENST00000612558 M0QYT0 321 aa9.27□□□□□ -0.93
CCDC47-207ENST00000612558 TRIM66O15016 1216 aa9.27□□□□□ -0.93
CCDC47-207ENST00000612558 SASH3O75995 380 aa9.27□□□□□ -0.93
CCDC47-207ENST00000612558 BAIAP3O94812 1187 aa9.27□□□□□ -0.93
CCDC47-207ENST00000612558 EFEMP2O95967 443 aa9.27□□□□□ -0.93
CCDC47-207ENST00000612558 F9P00740 461 aa9.27□□□□□ -0.93
CCDC47-207ENST00000612558 APOC2P02655 101 aa9.27□□□□□ -0.93
CCDC47-207ENST00000612558 BMP1P13497 986 aa9.27□□□□□ -0.93
CCDC47-207ENST00000612558 NCAM1P13591 858 aa9.27□□□□□ -0.93
CCDC47-207ENST00000612558 L1CAMP32004 1257 aa9.27□□□□□ -0.93
CCDC47-207ENST00000612558 TNNT3P45378 269 aaPredicted RBP9.27□□□□□ -0.93
CCDC47-207ENST00000612558 SLC5A3P53794 718 aa9.27□□□□□ -0.93
CCDC47-207ENST00000612558 ATXN1P54253 815 aaKnown RBP9.27□□□□□ -0.93
CCDC47-207ENST00000612558 AIF1P55008 147 aa9.27□□□□□ -0.93
CCDC47-207ENST00000612558 WDR5P61964 334 aaKnown RBP9.27□□□□□ -0.93
CCDC47-207ENST00000612558 GUCA2AQ02747 115 aa9.27□□□□□ -0.93
CCDC47-207ENST00000612558 DEUP1Q05D60 604 aa9.27□□□□□ -0.93
CCDC47-207ENST00000612558 GPR17Q13304 367 aa9.27□□□□□ -0.93
CCDC47-207ENST00000612558 DPYSL2Q16555 572 aa9.27□□□□□ -0.93
CCDC47-207ENST00000612558 USP41Q3LFD5 358 aa9.27□□□□□ -0.93
CCDC47-207ENST00000612558 ZC3H12AQ5D1E8 599 aaKnown RBP9.27□□□□□ -0.93
CCDC47-207ENST00000612558 RTP2Q5QGT7 225 aa9.27□□□□□ -0.93
CCDC47-207ENST00000612558 BSPRYQ5W0U4 402 aa9.27□□□□□ -0.93
CCDC47-207ENST00000612558 SND1Q7KZF4 910 aaKnown RBP eCLIP9.27□□□□□ -0.931e-7■■■■■ 30.1
CCDC47-207ENST00000612558 BHLHA9Q7RTU4 235 aa9.27□□□□□ -0.93
CCDC47-207ENST00000612558 TRIM46Q7Z4K8 759 aa9.27□□□□□ -0.93
CCDC47-207ENST00000612558 TMEM173Q86WV6 379 aaPredicted RBP9.27□□□□□ -0.93
CCDC47-207ENST00000612558 SCN4BQ8IWT1 228 aa9.27□□□□□ -0.93
CCDC47-207ENST00000612558 CMTR2Q8IYT2 770 aaKnown RBP9.27□□□□□ -0.93
CCDC47-207ENST00000612558 C2orf15Q8WU43 125 aaKnown RBP9.27□□□□□ -0.93
CCDC47-207ENST00000612558 BCL7CQ8WUZ0 217 aaPredicted RBP9.27□□□□□ -0.93
CCDC47-207ENST00000612558 PGAP3Q96FM1 320 aaPredicted RBP9.27□□□□□ -0.93
CCDC47-207ENST00000612558 IGSF21Q96ID5 467 aa9.27□□□□□ -0.93
CCDC47-207ENST00000612558 B3GALT6Q96L58 329 aa9.27□□□□□ -0.93
CCDC47-207ENST00000612558 CCDC114Q96M63 670 aa9.27□□□□□ -0.93
CCDC47-207ENST00000612558 RNF157Q96PX1 679 aa9.27□□□□□ -0.93
CCDC47-207ENST00000612558 SLC9A7Q96T83 725 aa9.27□□□□□ -0.93
CCDC47-207ENST00000612558 ZNF670Q9BS34 389 aa9.27□□□□□ -0.93
CCDC47-207ENST00000612558 FAM129AQ9BZQ8 928 aa9.27□□□□□ -0.93
CCDC47-207ENST00000612558 TRIM31Q9BZY9 425 aa9.27□□□□□ -0.93
CCDC47-207ENST00000612558 DPH5Q9H2P9 285 aa9.27□□□□□ -0.93
CCDC47-207ENST00000612558 PCDH18Q9HCL0 1135 aa9.27□□□□□ -0.93
CCDC47-207ENST00000612558 CALCOCO1Q9P1Z2 691 aa9.27□□□□□ -0.93
CCDC47-207ENST00000612558 SNX24Q9Y343 169 aa9.27□□□□□ -0.93
CCDC47-207ENST00000612558 H3BM21 787 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms