RNA–Protein interactions for RNA: ENST00000612497.1

SSX3-204, Transcript of SSX family member 3, humanhuman

TSL 5 BASIC

Gene SSX3, Length 1,030 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-204ENST00000612497 UCMAQ8WVF2 138 aa10.89□□□□□ -0.67
SSX3-204ENST00000612497 OVCA2Q8WZ82 227 aa10.89□□□□□ -0.67
SSX3-204ENST00000612497 BIRC7Q96CA5 298 aa10.89□□□□□ -0.67
SSX3-204ENST00000612497 FAM117AQ9C073 453 aa10.89□□□□□ -0.67
SSX3-204ENST00000612497 IKZF4Q9H2S9 585 aa10.89□□□□□ -0.67
SSX3-204ENST00000612497 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.89□□□□□ -0.67
SSX3-204ENST00000612497 PLK2Q9NYY3 685 aa10.89□□□□□ -0.67
SSX3-204ENST00000612497 MARK1Q9P0L2 795 aa10.89□□□□□ -0.67
SSX3-204ENST00000612497 THAP10Q9P2Z0 257 aaPredicted RBP10.89□□□□□ -0.67
SSX3-204ENST00000612497 FARP1Q9Y4F1 1045 aaPredicted RBP10.89□□□□□ -0.67
SSX3-204ENST00000612497 ARID1BQ8NFD5 2236 aaPredicted RBP10.89□□□□□ -0.67
SSX3-204ENST00000612497 NPC1O15118 1278 aa10.88□□□□□ -0.67
SSX3-204ENST00000612497 PLXNA2O75051 1894 aa10.88□□□□□ -0.67
SSX3-204ENST00000612497 SEMA4FO95754 770 aa10.88□□□□□ -0.67
SSX3-204ENST00000612497 TUBP50607 506 aa10.88□□□□□ -0.67
SSX3-204ENST00000612497 ZNF131P52739 623 aa10.88□□□□□ -0.67
SSX3-204ENST00000612497 COPAP53621 1224 aa10.88□□□□□ -0.67
SSX3-204ENST00000612497 NFATC3Q12968 1075 aa10.88□□□□□ -0.67
SSX3-204ENST00000612497 POSTNQ15063 836 aa10.88□□□□□ -0.67
SSX3-204ENST00000612497 KDM7AQ6ZMT4 941 aa10.88□□□□□ -0.67
SSX3-204ENST00000612497 DHX40Q8IX18 779 aaKnown RBP10.88□□□□□ -0.67
SSX3-204ENST00000612497 KCTD17Q8N5Z5 321 aa10.88□□□□□ -0.67
SSX3-204ENST00000612497 KCNE4Q8WWG9 221 aa10.88□□□□□ -0.67
SSX3-204ENST00000612497 TSC1Q92574 1164 aa10.88□□□□□ -0.67
SSX3-204ENST00000612497 HPDLQ96IR7 371 aa10.88□□□□□ -0.67
SSX3-204ENST00000612497 MMS19Q96T76 1030 aa10.88□□□□□ -0.67
SSX3-204ENST00000612497 ELF4Q99607 663 aaPredicted RBP10.88□□□□□ -0.67
SSX3-204ENST00000612497 ACE2Q9BYF1 805 aaPredicted RBP10.88□□□□□ -0.67
SSX3-204ENST00000612497 ZNF518BQ9C0D4 1074 aa10.88□□□□□ -0.67
SSX3-204ENST00000612497 ELOVL4Q9GZR5 314 aa10.88□□□□□ -0.67
SSX3-204ENST00000612497 SNX25Q9H3E2 840 aa10.88□□□□□ -0.67
SSX3-204ENST00000612497 TMEM30AQ9NV96 361 aa10.88□□□□□ -0.67
SSX3-204ENST00000612497 SIX4Q9UIU6 781 aa10.88□□□□□ -0.67
SSX3-204ENST00000612497 LSM7Q9UK45 103 aaKnown RBP10.88□□□□□ -0.67
SSX3-204ENST00000612497 CLDN5O00501 218 aa10.87□□□□□ -0.67
SSX3-204ENST00000612497 VILLO15195 856 aa10.87□□□□□ -0.67
SSX3-204ENST00000612497 TSPAN3O60637 253 aa10.87□□□□□ -0.67
SSX3-204ENST00000612497 TBCAO75347 108 aaKnown RBP10.87□□□□□ -0.67
SSX3-204ENST00000612497 EPHX1P07099 455 aa10.87□□□□□ -0.67
SSX3-204ENST00000612497 TMEM191BP0C7N4 346 aa10.87□□□□□ -0.67
SSX3-204ENST00000612497 ACO1P21399 889 aaKnown RBP10.87□□□□□ -0.67
SSX3-204ENST00000612497 WARSP23381 471 aaKnown RBP10.87□□□□□ -0.67
SSX3-204ENST00000612497 PRKCHP24723 683 aa10.87□□□□□ -0.67
SSX3-204ENST00000612497 GNL1P36915 607 aaPredicted RBP10.87□□□□□ -0.67
SSX3-204ENST00000612497 PRPHP41219 470 aa10.87□□□□□ -0.67
SSX3-204ENST00000612497 TOB1P50616 345 aaPredicted RBP10.87□□□□□ -0.67
SSX3-204ENST00000612497 BCAT1P54687 386 aa10.87□□□□□ -0.67
SSX3-204ENST00000612497 GOLGA8FQ08AF8 430 aa10.87□□□□□ -0.67
SSX3-204ENST00000612497 GOLGA8DPQ0D2H9 430 aa10.87□□□□□ -0.67
SSX3-204ENST00000612497 ILKQ13418 452 aa10.87□□□□□ -0.67
SSX3-204ENST00000612497 ENPP2Q13822 863 aa10.87□□□□□ -0.67
SSX3-204ENST00000612497 ZNF234Q14588 700 aa10.87□□□□□ -0.67
SSX3-204ENST00000612497 GEN1Q17RS7 908 aa10.87□□□□□ -0.67
SSX3-204ENST00000612497 C6orf132Q5T0Z8 1188 aa10.87□□□□□ -0.67
SSX3-204ENST00000612497 SNX30Q5VWJ9 437 aa10.87□□□□□ -0.67
SSX3-204ENST00000612497 KIAA1614Q5VZ46 1190 aa10.87□□□□□ -0.67
SSX3-204ENST00000612497 BRSK2Q8IWQ3 736 aa10.87□□□□□ -0.67
SSX3-204ENST00000612497 CACTIN-AS1Q8N1I8 211 aa10.87□□□□□ -0.67
SSX3-204ENST00000612497 DCBLD1Q8N8Z6 715 aa10.87□□□□□ -0.67
SSX3-204ENST00000612497 SCAMP5Q8TAC9 235 aa10.87□□□□□ -0.67
SSX3-204ENST00000612497 NOC3LQ8WTT2 800 aaKnown RBP10.87□□□□□ -0.67
SSX3-204ENST00000612497 SAAL1Q96ER3 474 aa10.87□□□□□ -0.67
SSX3-204ENST00000612497 HIC2Q96JB3 615 aa10.87□□□□□ -0.67
SSX3-204ENST00000612497 ZNF578Q96N58 590 aaPredicted RBP10.87□□□□□ -0.67
SSX3-204ENST00000612497 MTMR12Q9C0I1 747 aa10.87□□□□□ -0.67
SSX3-204ENST00000612497 LHX5Q9H2C1 402 aa10.87□□□□□ -0.67
SSX3-204ENST00000612497 RBAKQ9NYW8 714 aaPredicted RBP10.87□□□□□ -0.67
SSX3-204ENST00000612497 SPTAN1Q13813 2472 aaKnown RBP10.86□□□□□ -0.67
SSX3-204ENST00000612497 MYO9AB2RTY4 2548 aa10.86□□□□□ -0.67
SSX3-204ENST00000612497 GREM1O60565 184 aa10.86□□□□□ -0.67
SSX3-204ENST00000612497 TLR5O60602 858 aa10.86□□□□□ -0.67
SSX3-204ENST00000612497 PTPN1P18031 435 aaKnown RBP10.86□□□□□ -0.67
SSX3-204ENST00000612497 MFAP3P55082 362 aa10.86□□□□□ -0.67
SSX3-204ENST00000612497 INSM1Q01101 510 aaPredicted RBP10.86□□□□□ -0.67
SSX3-204ENST00000612497 E2F5Q15329 346 aa10.86□□□□□ -0.67
SSX3-204ENST00000612497 TMEM119Q4V9L6 283 aa10.86□□□□□ -0.67
SSX3-204ENST00000612497 SERPINA13PQ6UXR4 307 aa10.86□□□□□ -0.67
SSX3-204ENST00000612497 LIMS2Q7Z4I7 341 aa10.86□□□□□ -0.67
SSX3-204ENST00000612497 ZSWIM2Q8NEG5 633 aa10.86□□□□□ -0.67
SSX3-204ENST00000612497 OR6B3Q8NGW1 331 aa10.86□□□□□ -0.67
SSX3-204ENST00000612497 OR2T3Q8NH03 318 aa10.86□□□□□ -0.67
SSX3-204ENST00000612497 SAP25Q8TEE9 199 aa10.86□□□□□ -0.67
SSX3-204ENST00000612497 SKA1Q96BD8 255 aa10.86□□□□□ -0.67
SSX3-204ENST00000612497 FIZ1Q96SL8 496 aa10.86□□□□□ -0.67
SSX3-204ENST00000612497 KCNK16Q96T55 309 aa10.86□□□□□ -0.67
SSX3-204ENST00000612497 MRPL45Q9BRJ2 306 aaKnown RBP10.86□□□□□ -0.67
SSX3-204ENST00000612497 KLF16Q9BXK1 252 aaPredicted RBP10.86□□□□□ -0.67
SSX3-204ENST00000612497 BTBD1Q9H0C5 482 aa10.86□□□□□ -0.67
SSX3-204ENST00000612497 PDE11AQ9HCR9 933 aa10.86□□□□□ -0.67
SSX3-204ENST00000612497 SLC27A6Q9Y2P4 619 aa10.86□□□□□ -0.67
SSX3-204ENST00000612497 FLNCQ14315 2725 aa10.85□□□□□ -0.67
SSX3-204ENST00000612497 GOLGA8IPA6NC78 632 aa10.85□□□□□ -0.67
SSX3-204ENST00000612497 GOLGA8JA6NMD2 632 aa10.85□□□□□ -0.67
SSX3-204ENST00000612497 TBX18O95935 607 aa10.85□□□□□ -0.67
SSX3-204ENST00000612497 MT-CO3P00414 261 aa10.85□□□□□ -0.67
SSX3-204ENST00000612497 MPOP05164 745 aa10.85□□□□□ -0.67
SSX3-204ENST00000612497 CKMT2P17540 419 aa10.85□□□□□ -0.67
SSX3-204ENST00000612497 RACK1P63244 317 aaKnown RBP10.85□□□□□ -0.67
SSX3-204ENST00000612497 GABREP78334 506 aa10.85□□□□□ -0.67
SSX3-204ENST00000612497 ARID5AQ03989 594 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms