RNA–Protein interactions for RNA: ENST00000610907.1

PABPC1-224, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 1 (best) BASIC

Gene PABPC1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-224ENST00000610907 ZNF865P0CJ78 1059 aaPredicted RBP10.82□□□□□ -0.68
PABPC1-224ENST00000610907 CCDC130P13994 396 aa10.82□□□□□ -0.68
PABPC1-224ENST00000610907 AKAP5P24588 427 aa10.82□□□□□ -0.68
PABPC1-224ENST00000610907 CNTFP26441 200 aa10.82□□□□□ -0.68
PABPC1-224ENST00000610907 ADORA2BP29275 332 aa10.82□□□□□ -0.68
PABPC1-224ENST00000610907 NOS2P35228 1153 aa10.82□□□□□ -0.68
PABPC1-224ENST00000610907 SERPINB9P50453 376 aa10.82□□□□□ -0.68
PABPC1-224ENST00000610907 RASSF2P50749 326 aa10.82□□□□□ -0.68
PABPC1-224ENST00000610907 NEK3P51956 506 aa10.82□□□□□ -0.68
PABPC1-224ENST00000610907 AIF1P55008 147 aa10.82□□□□□ -0.68
PABPC1-224ENST00000610907 LILRA4P59901 499 aa10.82□□□□□ -0.68
PABPC1-224ENST00000610907 SF3A3Q12874 501 aaKnown RBP eCLIP10.82□□□□□ -0.68
PABPC1-224ENST00000610907 SEMA5AQ13591 1074 aa10.82□□□□□ -0.68
PABPC1-224ENST00000610907 EFTUD2Q15029 972 aaKnown RBP eCLIP10.82□□□□□ -0.687e-11■■■□□ 17.5
PABPC1-224ENST00000610907 GLRA4Q5JXX5 417 aa10.82□□□□□ -0.68
PABPC1-224ENST00000610907 HEATR6Q6AI08 1181 aaKnown RBP10.82□□□□□ -0.68
PABPC1-224ENST00000610907 OTOAQ7RTW8 1153 aa10.82□□□□□ -0.68
PABPC1-224ENST00000610907 TBC1D1Q86TI0 1168 aaPredicted RBP10.82□□□□□ -0.68
PABPC1-224ENST00000610907 CCNJLQ8IV13 435 aa10.82□□□□□ -0.68
PABPC1-224ENST00000610907 TRIM42Q8IWZ5 723 aa10.82□□□□□ -0.68
PABPC1-224ENST00000610907 ADGRF2Q8IZF7 708 aa10.82□□□□□ -0.68
PABPC1-224ENST00000610907 TAB3Q8N5C8 712 aaPredicted RBP10.82□□□□□ -0.68
PABPC1-224ENST00000610907 SLC2A14Q8TDB8 520 aa10.82□□□□□ -0.68
PABPC1-224ENST00000610907 NT5C3BQ969T7 300 aa10.82□□□□□ -0.68
PABPC1-224ENST00000610907 RAB3IPQ96QF0 476 aaPredicted RBP10.82□□□□□ -0.68
PABPC1-224ENST00000610907 SLC9A7Q96T83 725 aa10.82□□□□□ -0.68
PABPC1-224ENST00000610907 EBNA1BP2Q99848 306 aaKnown RBP10.82□□□□□ -0.68
PABPC1-224ENST00000610907 TUBB6Q9BUF5 446 aa10.82□□□□□ -0.68
PABPC1-224ENST00000610907 AP5M1Q9H0R1 490 aa10.82□□□□□ -0.68
PABPC1-224ENST00000610907 MANSC1Q9H8J5 431 aa10.82□□□□□ -0.68
PABPC1-224ENST00000610907 FZD10Q9ULW2 581 aa10.82□□□□□ -0.68
PABPC1-224ENST00000610907 TTLL3Q9Y4R7 772 aa10.82□□□□□ -0.68
PABPC1-224ENST00000610907 C17orf102A2RUQ5 167 aa10.81□□□□□ -0.68
PABPC1-224ENST00000610907 KPNA6O60684 536 aa10.81□□□□□ -0.68
PABPC1-224ENST00000610907 KRT38O76015 456 aa10.81□□□□□ -0.68
PABPC1-224ENST00000610907 STK10O94804 968 aaKnown RBP10.81□□□□□ -0.68
PABPC1-224ENST00000610907 FBXO21O94952 628 aa10.81□□□□□ -0.68
PABPC1-224ENST00000610907 ATP6V1G2O95670 118 aa10.81□□□□□ -0.68
PABPC1-224ENST00000610907 APOEP02649 317 aa10.81□□□□□ -0.68
PABPC1-224ENST00000610907 LCP1P13796 627 aa10.81□□□□□ -0.68
PABPC1-224ENST00000610907 ADRA1DP25100 572 aa10.81□□□□□ -0.68
PABPC1-224ENST00000610907 LMO2P25791 158 aa10.81□□□□□ -0.68
PABPC1-224ENST00000610907 HOXC8P31273 242 aa10.81□□□□□ -0.68
PABPC1-224ENST00000610907 ETV4P43268 484 aa10.81□□□□□ -0.68
PABPC1-224ENST00000610907 NRLP54845 237 aa10.81□□□□□ -0.68
PABPC1-224ENST00000610907 FAAP100Q0VG06 881 aa10.81□□□□□ -0.68
PABPC1-224ENST00000610907 PARP6Q2NL67 630 aa10.81□□□□□ -0.68
PABPC1-224ENST00000610907 OLFML2BQ68BL8 750 aa10.81□□□□□ -0.68
PABPC1-224ENST00000610907 KCNT2Q6UVM3 1135 aa10.81□□□□□ -0.68
PABPC1-224ENST00000610907 PAXIP1Q6ZW49 1069 aaPredicted RBP10.81□□□□□ -0.68
PABPC1-224ENST00000610907 BNIPLQ7Z465 357 aa10.81□□□□□ -0.68
PABPC1-224ENST00000610907 B3GALNT2Q8NCR0 500 aa10.81□□□□□ -0.68
PABPC1-224ENST00000610907 TFB1MQ8WVM0 346 aaKnown RBP10.81□□□□□ -0.68
PABPC1-224ENST00000610907 C10orf82Q8WW14 230 aa10.81□□□□□ -0.68
PABPC1-224ENST00000610907 INPP5DQ92835 1189 aa10.81□□□□□ -0.68
PABPC1-224ENST00000610907 SIGLEC10Q96LC7 697 aa10.81□□□□□ -0.68
PABPC1-224ENST00000610907 OLFM3Q96PB7 478 aa10.81□□□□□ -0.68
PABPC1-224ENST00000610907 TMEM237Q96Q45 408 aa10.81□□□□□ -0.68
PABPC1-224ENST00000610907 KCTD15Q96SI1 283 aaPredicted RBP10.81□□□□□ -0.68
PABPC1-224ENST00000610907 PTPN18Q99952 460 aa10.81□□□□□ -0.68
PABPC1-224ENST00000610907 TACO1Q9BSH4 297 aaKnown RBP10.81□□□□□ -0.68
PABPC1-224ENST00000610907 APOL6Q9BWW8 343 aa10.81□□□□□ -0.68
PABPC1-224ENST00000610907 SLCO1B3Q9NPD5 702 aa10.81□□□□□ -0.68
PABPC1-224ENST00000610907 SAR1AQ9NR31 198 aa10.81□□□□□ -0.68
PABPC1-224ENST00000610907 EIF2B3Q9NR50 452 aaKnown RBP10.81□□□□□ -0.68
PABPC1-224ENST00000610907 SLC38A7Q9NVC3 462 aa10.81□□□□□ -0.68
PABPC1-224ENST00000610907 STAP1Q9ULZ2 295 aa10.81□□□□□ -0.68
PABPC1-224ENST00000610907 IPPQ9Y573 584 aa10.81□□□□□ -0.68
PABPC1-224ENST00000610907 RAD54BQ9Y620 910 aa10.81□□□□□ -0.68
PABPC1-224ENST00000610907 USP3Q9Y6I4 520 aa10.81□□□□□ -0.68
PABPC1-224ENST00000610907 A0A0A0MRY4 1105 aa10.8□□□□□ -0.68
PABPC1-224ENST00000610907 H3BRJ5 948 aa10.8□□□□□ -0.68
PABPC1-224ENST00000610907 IGF2BP3O00425 579 aaKnown RBP eCLIP10.8□□□□□ -0.683e-9■■■■■ 37.6
PABPC1-224ENST00000610907 COPEO14579 308 aa10.8□□□□□ -0.68
PABPC1-224ENST00000610907 GABRDO14764 452 aa10.8□□□□□ -0.68
PABPC1-224ENST00000610907 TREHO43280 583 aa10.8□□□□□ -0.68
PABPC1-224ENST00000610907 OPHN1O60890 802 aa10.8□□□□□ -0.68
PABPC1-224ENST00000610907 AVILO75366 819 aa10.8□□□□□ -0.68
PABPC1-224ENST00000610907 NPR3P17342 541 aa10.8□□□□□ -0.68
PABPC1-224ENST00000610907 PTPN1P18031 435 aaKnown RBP10.8□□□□□ -0.68
PABPC1-224ENST00000610907 MRPS5P82675 430 aaKnown RBP10.8□□□□□ -0.68
PABPC1-224ENST00000610907 GBE1Q04446 702 aa10.8□□□□□ -0.68
PABPC1-224ENST00000610907 SLC10A2Q12908 348 aaPredicted RBP10.8□□□□□ -0.68
PABPC1-224ENST00000610907 NCBP2-AS2Q69YL0 99 aa10.8□□□□□ -0.68
PABPC1-224ENST00000610907 TAF2Q6P1X5 1199 aa10.8□□□□□ -0.68
PABPC1-224ENST00000610907 PIGZQ86VD9 579 aa10.8□□□□□ -0.68
PABPC1-224ENST00000610907 DEFB106AQ8N104 65 aa10.8□□□□□ -0.68
PABPC1-224ENST00000610907 TMEM86AQ8N2M4 240 aa10.8□□□□□ -0.68
PABPC1-224ENST00000610907 AGGF1Q8N302 714 aaeCLIP10.8□□□□□ -0.68
PABPC1-224ENST00000610907 SMG8Q8ND04 991 aaKnown RBP10.8□□□□□ -0.68
PABPC1-224ENST00000610907 GSDMBQ8TAX9 411 aa10.8□□□□□ -0.68
PABPC1-224ENST00000610907 RAB3IL1Q8TBN0 382 aa10.8□□□□□ -0.68
PABPC1-224ENST00000610907 CCDC110Q8TBZ0 833 aa10.8□□□□□ -0.68
PABPC1-224ENST00000610907 CLEC4CQ8WTT0 213 aa10.8□□□□□ -0.68
PABPC1-224ENST00000610907 TMEM40Q8WWA1 233 aa10.8□□□□□ -0.68
PABPC1-224ENST00000610907 HTR3CQ8WXA8 447 aa10.8□□□□□ -0.68
PABPC1-224ENST00000610907 SPATA13Q96N96 652 aa10.8□□□□□ -0.68
PABPC1-224ENST00000610907 NAT9Q9BTE0 207 aa10.8□□□□□ -0.68
PABPC1-224ENST00000610907 TRIM55Q9BYV6 548 aa10.8□□□□□ -0.68
PABPC1-224ENST00000610907 IQCGQ9H095 443 aaKnown RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms