RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 ST3GAL5Q9UNP4 418 aa4.96□□□□□ -1.62
SMCHD1-213ENST00000609587 PCDHGB3Q9Y5G1 929 aa4.96□□□□□ -1.62
SMCHD1-213ENST00000609587 H0YIZ8 118 aa4.95□□□□□ -1.62
SMCHD1-213ENST00000609587 MGST3O14880 152 aa4.95□□□□□ -1.62
SMCHD1-213ENST00000609587 DHHO43323 396 aa4.95□□□□□ -1.62
SMCHD1-213ENST00000609587 SPRY2O43597 315 aa4.95□□□□□ -1.62
SMCHD1-213ENST00000609587 CBFA2T3O75081 653 aa4.95□□□□□ -1.62
SMCHD1-213ENST00000609587 TAF5LO75529 589 aa4.95□□□□□ -1.62
SMCHD1-213ENST00000609587 ACTL6BO94805 426 aa4.95□□□□□ -1.62
SMCHD1-213ENST00000609587 TJP3O95049 919 aa4.95□□□□□ -1.62
SMCHD1-213ENST00000609587 NPSP0C0P6 89 aa4.95□□□□□ -1.62
SMCHD1-213ENST00000609587 FAM163BP0C2L3 166 aa4.95□□□□□ -1.62
SMCHD1-213ENST00000609587 DRD1P21728 446 aa4.95□□□□□ -1.62
SMCHD1-213ENST00000609587 KLRK1P26718 216 aa4.95□□□□□ -1.62
SMCHD1-213ENST00000609587 AKT1P31749 480 aa4.95□□□□□ -1.62
SMCHD1-213ENST00000609587 GSTM5P46439 218 aa4.95□□□□□ -1.62
SMCHD1-213ENST00000609587 DGKQP52824 942 aa4.95□□□□□ -1.62
SMCHD1-213ENST00000609587 ELLP55199 621 aaPredicted RBP4.95□□□□□ -1.62
SMCHD1-213ENST00000609587 FOXF2Q12947 444 aa4.95□□□□□ -1.62
SMCHD1-213ENST00000609587 RAPGEF1Q13905 1077 aa4.95□□□□□ -1.62
SMCHD1-213ENST00000609587 POSTNQ15063 836 aa4.95□□□□□ -1.62
SMCHD1-213ENST00000609587 TMEM196Q5HYL7 178 aa4.95□□□□□ -1.62
SMCHD1-213ENST00000609587 TANGO2Q6ICL3 276 aa4.95□□□□□ -1.62
SMCHD1-213ENST00000609587 LIN54Q6MZP7 749 aa4.95□□□□□ -1.62
SMCHD1-213ENST00000609587 JMJD6Q6NYC1 403 aaPredicted RBP4.95□□□□□ -1.62
SMCHD1-213ENST00000609587 PTCHD4Q6ZW05 846 aa4.95□□□□□ -1.62
SMCHD1-213ENST00000609587 ZNF354CQ86Y25 554 aa4.95□□□□□ -1.62
SMCHD1-213ENST00000609587 P3H2Q8IVL5 708 aa4.95□□□□□ -1.62
SMCHD1-213ENST00000609587 CCDC117Q8IWD4 279 aaPredicted RBP4.95□□□□□ -1.62
SMCHD1-213ENST00000609587 CPXCR1Q8N123 301 aa4.95□□□□□ -1.62
SMCHD1-213ENST00000609587 GALNT15Q8N3T1 639 aa4.95□□□□□ -1.62
SMCHD1-213ENST00000609587 C9orf106Q8NAJ2 232 aa4.95□□□□□ -1.62
SMCHD1-213ENST00000609587 NGDNQ8NEJ9 315 aaKnown RBP4.95□□□□□ -1.62
SMCHD1-213ENST00000609587 STT3BQ8TCJ2 826 aa4.95□□□□□ -1.62
SMCHD1-213ENST00000609587 SCARB1Q8WTV0 552 aa4.95□□□□□ -1.62
SMCHD1-213ENST00000609587 WDR60Q8WVS4 1066 aa4.95□□□□□ -1.62
SMCHD1-213ENST00000609587 PPM1EQ8WY54 764 aa4.95□□□□□ -1.62
SMCHD1-213ENST00000609587 TBC1D20Q96BZ9 403 aa4.95□□□□□ -1.62
SMCHD1-213ENST00000609587 CTHRC1Q96CG8 243 aa4.95□□□□□ -1.62
SMCHD1-213ENST00000609587 EIF3CQ99613 913 aaKnown RBP4.95□□□□□ -1.62
SMCHD1-213ENST00000609587 TIMP4Q99727 224 aa4.95□□□□□ -1.62
SMCHD1-213ENST00000609587 RTKNQ9BST9 563 aa4.95□□□□□ -1.62
SMCHD1-213ENST00000609587 MLXIPQ9HAP2 919 aa4.95□□□□□ -1.62
SMCHD1-213ENST00000609587 FSCN3Q9NQT6 498 aa4.95□□□□□ -1.62
SMCHD1-213ENST00000609587 SEMA4GQ9NTN9 838 aa4.95□□□□□ -1.62
SMCHD1-213ENST00000609587 MGAT4CQ9UBM8 478 aa4.95□□□□□ -1.62
SMCHD1-213ENST00000609587 LPAR3Q9UBY5 353 aa4.95□□□□□ -1.62
SMCHD1-213ENST00000609587 AMFRQ9UKV5 643 aa4.95□□□□□ -1.62
SMCHD1-213ENST00000609587 ADAMTS5Q9UNA0 930 aa4.95□□□□□ -1.62
SMCHD1-213ENST00000609587 COL11A2P13942 1736 aaPredicted RBP4.94□□□□□ -1.62
SMCHD1-213ENST00000609587 GCOM1H8Y6P7 765 aaPredicted RBP4.94□□□□□ -1.62
SMCHD1-213ENST00000609587 IPO5O00410 1097 aaKnown RBP4.94□□□□□ -1.62
SMCHD1-213ENST00000609587 ELFN1P0C7U0 828 aa4.94□□□□□ -1.62
SMCHD1-213ENST00000609587 DHRS4L1P0CG22 281 aa4.94□□□□□ -1.62
SMCHD1-213ENST00000609587 ADRA1DP25100 572 aa4.94□□□□□ -1.62
SMCHD1-213ENST00000609587 MCM5P33992 734 aa4.94□□□□□ -1.62
SMCHD1-213ENST00000609587 CCT8P50990 548 aa4.94□□□□□ -1.62
SMCHD1-213ENST00000609587 RENBPP51606 427 aa4.94□□□□□ -1.62
SMCHD1-213ENST00000609587 EEFSECP57772 596 aaKnown RBP4.94□□□□□ -1.62
SMCHD1-213ENST00000609587 BIRC3Q13489 604 aa4.94□□□□□ -1.62
SMCHD1-213ENST00000609587 BFSP2Q13515 415 aa4.94□□□□□ -1.62
SMCHD1-213ENST00000609587 TMEM95Q3KNT9 176 aa4.94□□□□□ -1.62
SMCHD1-213ENST00000609587 FAM153CQ494X1 144 aa4.94□□□□□ -1.62
SMCHD1-213ENST00000609587 C4orf46Q504U0 113 aa4.94□□□□□ -1.62
SMCHD1-213ENST00000609587 AARS2Q5JTZ9 985 aaKnown RBP4.94□□□□□ -1.62
SMCHD1-213ENST00000609587 L1TD1Q5T7N2 865 aaKnown RBP4.94□□□□□ -1.62
SMCHD1-213ENST00000609587 GRHL2Q6ISB3 625 aa4.94□□□□□ -1.62
SMCHD1-213ENST00000609587 MTHFD1LQ6UB35 978 aa4.94□□□□□ -1.62
SMCHD1-213ENST00000609587 GRASPQ7Z6J2 395 aaPredicted RBP4.94□□□□□ -1.62
SMCHD1-213ENST00000609587 SLC44A2Q8IWA5 706 aaPredicted RBP4.94□□□□□ -1.62
SMCHD1-213ENST00000609587 SMAP1Q8IYB5 467 aaPredicted RBP4.94□□□□□ -1.62
SMCHD1-213ENST00000609587 OR1N1Q8NGS0 311 aa4.94□□□□□ -1.62
SMCHD1-213ENST00000609587 OTUD7AQ8TE49 926 aaPredicted RBP4.94□□□□□ -1.62
SMCHD1-213ENST00000609587 RUBCNQ92622 972 aa4.94□□□□□ -1.62
SMCHD1-213ENST00000609587 RSC1A1Q92681 617 aa4.94□□□□□ -1.62
SMCHD1-213ENST00000609587 NELL1Q92832 810 aa4.94□□□□□ -1.62
SMCHD1-213ENST00000609587 FSD1LQ9BXM9 530 aa4.94□□□□□ -1.62
SMCHD1-213ENST00000609587 DGKBQ9Y6T7 804 aa4.94□□□□□ -1.62
SMCHD1-213ENST00000609587 COL3A1P02461 1466 aaPredicted RBP4.94□□□□□ -1.62
SMCHD1-213ENST00000609587 TMPRSS11DO60235 418 aa4.93□□□□□ -1.62
SMCHD1-213ENST00000609587 C1RP00736 705 aa4.93□□□□□ -1.62
SMCHD1-213ENST00000609587 MYCLP12524 364 aaPredicted RBP4.93□□□□□ -1.62
SMCHD1-213ENST00000609587 WT1P19544 449 aaPredicted RBP4.93□□□□□ -1.62
SMCHD1-213ENST00000609587 CCT5P48643 541 aa4.93□□□□□ -1.62
SMCHD1-213ENST00000609587 AP2B1P63010 937 aa4.93□□□□□ -1.62
SMCHD1-213ENST00000609587 PSG6Q00889 435 aa4.93□□□□□ -1.62
SMCHD1-213ENST00000609587 SEMA3BQ13214 749 aa4.93□□□□□ -1.62
SMCHD1-213ENST00000609587 KCNJ12Q14500 433 aa4.93□□□□□ -1.62
SMCHD1-213ENST00000609587 BTBD16Q32M84 506 aa4.93□□□□□ -1.62
SMCHD1-213ENST00000609587 AASDHQ4L235 1098 aaPredicted RBP4.93□□□□□ -1.62
SMCHD1-213ENST00000609587 PCID2Q5JVF3 399 aa4.93□□□□□ -1.62
SMCHD1-213ENST00000609587 DENND2CQ68D51 928 aa4.93□□□□□ -1.62
SMCHD1-213ENST00000609587 PIK3AP1Q6ZUJ8 805 aa4.93□□□□□ -1.62
SMCHD1-213ENST00000609587 RFX8Q6ZV50 586 aa4.93□□□□□ -1.62
SMCHD1-213ENST00000609587 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.93□□□□□ -1.62
SMCHD1-213ENST00000609587 SCAMP5Q8TAC9 235 aa4.93□□□□□ -1.62
SMCHD1-213ENST00000609587 OVCA2Q8WZ82 227 aa4.93□□□□□ -1.62
SMCHD1-213ENST00000609587 LENG8Q96PV6 779 aaPredicted RBP4.93□□□□□ -1.62
SMCHD1-213ENST00000609587 FAM167BQ9BTA0 163 aa4.93□□□□□ -1.62
SMCHD1-213ENST00000609587 PABPC3Q9H361 631 aaKnown RBP4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms