RNA–Protein interactions for RNA: ENST00000609445.5

SGMS1-209, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-209ENST00000609445 RAB41Q5JT25 222 aa16.8■□□□□ 0.28
SGMS1-209ENST00000609445 ISM2Q6H9L7 571 aa16.8■□□□□ 0.28
SGMS1-209ENST00000609445 KIAA1211LQ6NV74 962 aa16.8■□□□□ 0.28
SGMS1-209ENST00000609445 TADA2BQ86TJ2 420 aa16.8■□□□□ 0.28
SGMS1-209ENST00000609445 ZNF276Q8N554 614 aa16.8■□□□□ 0.28
SGMS1-209ENST00000609445 TTC39CQ8N584 583 aa16.8■□□□□ 0.28
SGMS1-209ENST00000609445 DEFB119Q8N690 84 aa16.8■□□□□ 0.28
SGMS1-209ENST00000609445 ANKRD52Q8NB46 1076 aa16.8■□□□□ 0.28
SGMS1-209ENST00000609445 SPATA20Q8TB22 786 aa16.8■□□□□ 0.28
SGMS1-209ENST00000609445 SMARCE1Q969G3 411 aa16.8■□□□□ 0.28
SGMS1-209ENST00000609445 CD248Q9HCU0 757 aa16.8■□□□□ 0.28
SGMS1-209ENST00000609445 TMEM74BQ9NUR3 256 aa16.8■□□□□ 0.28
SGMS1-209ENST00000609445 CALCOCO1Q9P1Z2 691 aa16.8■□□□□ 0.28
SGMS1-209ENST00000609445 COQ4Q9Y3A0 265 aa16.8■□□□□ 0.28
SGMS1-209ENST00000609445 USP24Q9UPU5 2620 aa16.79■□□□□ 0.28
SGMS1-209ENST00000609445 WASH3PC4AMC7 463 aa16.79■□□□□ 0.28
SGMS1-209ENST00000609445 KCNK5O95279 499 aa16.79■□□□□ 0.28
SGMS1-209ENST00000609445 SMC2O95347 1197 aa16.79■□□□□ 0.28
SGMS1-209ENST00000609445 TKTL1P51854 596 aa16.79■□□□□ 0.28
SGMS1-209ENST00000609445 YWHAGP61981 247 aaKnown RBP eCLIP16.79■□□□□ 0.28
SGMS1-209ENST00000609445 PDE4CQ08493 712 aa16.79■□□□□ 0.28
SGMS1-209ENST00000609445 RSRC2Q7L4I2 434 aaKnown RBP16.79■□□□□ 0.28
SGMS1-209ENST00000609445 BHLHA9Q7RTU4 235 aa16.79■□□□□ 0.28
SGMS1-209ENST00000609445 CHPFQ8IZ52 775 aa16.79■□□□□ 0.28
SGMS1-209ENST00000609445 SLC35C1Q96A29 364 aa16.79■□□□□ 0.28
SGMS1-209ENST00000609445 ULBP1Q9BZM6 244 aa16.79■□□□□ 0.28
SGMS1-209ENST00000609445 UBXN6Q9BZV1 441 aa16.79■□□□□ 0.28
SGMS1-209ENST00000609445 SLC6A17Q9H1V8 727 aa16.79■□□□□ 0.28
SGMS1-209ENST00000609445 CD93Q9NPY3 652 aa16.79■□□□□ 0.28
SGMS1-209ENST00000609445 CACNA2D2Q9NY47 1150 aa16.79■□□□□ 0.28
SGMS1-209ENST00000609445 ARMCX3Q9UH62 379 aaPredicted RBP16.79■□□□□ 0.28
SGMS1-209ENST00000609445 FBXO10Q9UK96 956 aa16.79■□□□□ 0.28
SGMS1-209ENST00000609445 TSPAN16Q9UKR8 245 aa16.79■□□□□ 0.28
SGMS1-209ENST00000609445 RAD54BQ9Y620 910 aa16.79■□□□□ 0.28
SGMS1-209ENST00000609445 CACNA1EQ15878 2313 aa16.78■□□□□ 0.28
SGMS1-209ENST00000609445 SLC12A8A0AV02 714 aa16.78■□□□□ 0.28
SGMS1-209ENST00000609445 CDX4O14627 284 aaPredicted RBP16.78■□□□□ 0.28
SGMS1-209ENST00000609445 GIPC1O14908 333 aa16.78■□□□□ 0.28
SGMS1-209ENST00000609445 PENKP01210 267 aaPredicted RBP16.78■□□□□ 0.28
SGMS1-209ENST00000609445 CD19P15391 556 aa16.78■□□□□ 0.28
SGMS1-209ENST00000609445 CD44P16070 742 aaKnown RBP16.78■□□□□ 0.28
SGMS1-209ENST00000609445 NDUFV2P19404 249 aa16.78■□□□□ 0.28
SGMS1-209ENST00000609445 ITPKAP23677 461 aa16.78■□□□□ 0.28
SGMS1-209ENST00000609445 COG7P83436 770 aa16.78■□□□□ 0.28
SGMS1-209ENST00000609445 BYSLQ13895 437 aaKnown RBP16.78■□□□□ 0.28
SGMS1-209ENST00000609445 TRIM61Q5EBN2 209 aa16.78■□□□□ 0.28
SGMS1-209ENST00000609445 PSAPL1Q6NUJ1 521 aa16.78■□□□□ 0.28
SGMS1-209ENST00000609445 UBR7Q8N806 425 aa16.78■□□□□ 0.28
SGMS1-209ENST00000609445 UBA3Q8TBC4 463 aa16.78■□□□□ 0.28
SGMS1-209ENST00000609445 IPO4Q8TEX9 1081 aaKnown RBP16.78■□□□□ 0.28
SGMS1-209ENST00000609445 CDK5RAP1Q96SZ6 601 aaKnown RBP16.78■□□□□ 0.28
SGMS1-209ENST00000609445 DCLK3Q9C098 648 aa16.78■□□□□ 0.28
SGMS1-209ENST00000609445 TMEM9BQ9NQ34 198 aa16.78■□□□□ 0.28
SGMS1-209ENST00000609445 MARCH2Q9P0N8 246 aa16.78■□□□□ 0.28
SGMS1-209ENST00000609445 AGO1Q9UL18 857 aaKnown RBP16.78■□□□□ 0.28
SGMS1-209ENST00000609445 ZBED1O96006 694 aa16.77■□□□□ 0.28
SGMS1-209ENST00000609445 PMLP29590 882 aa16.77■□□□□ 0.28
SGMS1-209ENST00000609445 BCAT1P54687 386 aa16.77■□□□□ 0.28
SGMS1-209ENST00000609445 RPL6Q02878 288 aaKnown RBP16.77■□□□□ 0.28
SGMS1-209ENST00000609445 LRRC63Q05C16 580 aa16.77■□□□□ 0.28
SGMS1-209ENST00000609445 BST2Q10589 180 aaKnown RBP16.77■□□□□ 0.28
SGMS1-209ENST00000609445 SGO2Q562F6 1265 aa16.77■□□□□ 0.28
SGMS1-209ENST00000609445 FYB2Q5VWT5 728 aa16.77■□□□□ 0.28
SGMS1-209ENST00000609445 LYSMD4Q5XG99 296 aa16.77■□□□□ 0.28
SGMS1-209ENST00000609445 PM20D1Q6GTS8 502 aa16.77■□□□□ 0.28
SGMS1-209ENST00000609445 SDE2Q6IQ49 451 aa16.77■□□□□ 0.28
SGMS1-209ENST00000609445 SYT12Q8IV01 421 aa16.77■□□□□ 0.28
SGMS1-209ENST00000609445 DENND1CQ8IV53 801 aa16.77■□□□□ 0.28
SGMS1-209ENST00000609445 ARHGAP18Q8N392 663 aa16.77■□□□□ 0.28
SGMS1-209ENST00000609445 GABRG3Q99928 467 aa16.77■□□□□ 0.28
SGMS1-209ENST00000609445 FAM124BQ9H5Z6 455 aaPredicted RBP16.77■□□□□ 0.28
SGMS1-209ENST00000609445 FSCN3Q9NQT6 498 aa16.77■□□□□ 0.28
SGMS1-209ENST00000609445 EVLQ9UI08 416 aaPredicted RBP16.77■□□□□ 0.28
SGMS1-209ENST00000609445 STRIP2Q9ULQ0 834 aa16.77■□□□□ 0.28
SGMS1-209ENST00000609445 CLEC4EQ9ULY5 219 aa16.77■□□□□ 0.28
SGMS1-209ENST00000609445 CYP8B1Q9UNU6 501 aa16.77■□□□□ 0.28
SGMS1-209ENST00000609445 ZNF510Q9Y2H8 683 aa16.77■□□□□ 0.28
SGMS1-209ENST00000609445 IGHV1OR15-9A0A0B4J2B8 117 aa16.76■□□□□ 0.27
SGMS1-209ENST00000609445 XPO1O14980 1071 aaKnown RBP16.76■□□□□ 0.27
SGMS1-209ENST00000609445 NOVA1P51513 510 aaKnown RBP16.76■□□□□ 0.27
SGMS1-209ENST00000609445 MFAP3P55082 362 aa16.76■□□□□ 0.27
SGMS1-209ENST00000609445 SLC8A3P57103 927 aa16.76■□□□□ 0.27
SGMS1-209ENST00000609445 NUCB2P80303 420 aa16.76■□□□□ 0.27
SGMS1-209ENST00000609445 ADIGQ0VDE8 80 aa16.76■□□□□ 0.27
SGMS1-209ENST00000609445 BECN1Q14457 450 aa16.76■□□□□ 0.27
SGMS1-209ENST00000609445 GEN1Q17RS7 908 aa16.76■□□□□ 0.27
SGMS1-209ENST00000609445 UAP1L1Q3KQV9 507 aa16.76■□□□□ 0.27
SGMS1-209ENST00000609445 DAB2IPQ5VWQ8 1189 aa16.76■□□□□ 0.27
SGMS1-209ENST00000609445 KAT5Q92993 513 aa16.76■□□□□ 0.27
SGMS1-209ENST00000609445 TIGD1Q96MW7 591 aa16.76■□□□□ 0.27
SGMS1-209ENST00000609445 LRRC4Q9HBW1 653 aa16.76■□□□□ 0.27
SGMS1-209ENST00000609445 HESX1Q9UBX0 185 aa16.76■□□□□ 0.27
SGMS1-209ENST00000609445 MAN1B1Q9UKM7 699 aa16.76■□□□□ 0.27
SGMS1-209ENST00000609445 STON1Q9Y6Q2 735 aa16.76■□□□□ 0.27
SGMS1-209ENST00000609445 YJEFN3A6XGL0 299 aa16.75■□□□□ 0.27
SGMS1-209ENST00000609445 E7ENQ6 273 aa16.75■□□□□ 0.27
SGMS1-209ENST00000609445 O00370 1275 aa16.75■□□□□ 0.27
SGMS1-209ENST00000609445 PSMA7O14818 248 aa16.75■□□□□ 0.27
SGMS1-209ENST00000609445 AP5Z1O43299 807 aa16.75■□□□□ 0.27
SGMS1-209ENST00000609445 CALCAP01258 141 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms