RNA–Protein interactions for RNA: ENST00000607448.5

LINC01001-203, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 1,569 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-203ENST00000607448 C1orf220Q5T0J3 134 aa11.07□□□□□ -0.64
LINC01001-203ENST00000607448 PHLDB3Q6NSJ2 640 aa11.07□□□□□ -0.64
LINC01001-203ENST00000607448 FOXR1Q6PIV2 292 aa11.07□□□□□ -0.64
LINC01001-203ENST00000607448 DCP1BQ8IZD4 617 aaKnown RBP11.07□□□□□ -0.64
LINC01001-203ENST00000607448 C3orf20Q8ND61 904 aa11.07□□□□□ -0.64
LINC01001-203ENST00000607448 TMC2Q8TDI7 906 aa11.07□□□□□ -0.64
LINC01001-203ENST00000607448 BCAS4Q8TDM0 211 aa11.07□□□□□ -0.64
LINC01001-203ENST00000607448 C2orf15Q8WU43 125 aaKnown RBP11.07□□□□□ -0.64
LINC01001-203ENST00000607448 ELSPBP1Q96BH3 223 aa11.07□□□□□ -0.64
LINC01001-203ENST00000607448 FAM81BQ96LP2 452 aa11.07□□□□□ -0.64
LINC01001-203ENST00000607448 LRRC3BQ96PB8 259 aa11.07□□□□□ -0.64
LINC01001-203ENST00000607448 DDX47Q9H0S4 455 aaKnown RBP11.07□□□□□ -0.64
LINC01001-203ENST00000607448 KCNH6Q9H252 994 aa11.07□□□□□ -0.64
LINC01001-203ENST00000607448 GOLPH3Q9H4A6 298 aa11.07□□□□□ -0.64
LINC01001-203ENST00000607448 DPEP3Q9H4B8 488 aa11.07□□□□□ -0.64
LINC01001-203ENST00000607448 MTF2Q9Y483 593 aaPredicted RBP11.07□□□□□ -0.64
LINC01001-203ENST00000607448 PCDHB5Q9Y5E4 795 aa11.07□□□□□ -0.64
LINC01001-203ENST00000607448 KRT14P02533 472 aa11.06□□□□□ -0.64
LINC01001-203ENST00000607448 FGGP02679 453 aa11.06□□□□□ -0.64
LINC01001-203ENST00000607448 C4BPAP04003 597 aaKnown RBP11.06□□□□□ -0.64
LINC01001-203ENST00000607448 DCNP07585 359 aaKnown RBP11.06□□□□□ -0.64
LINC01001-203ENST00000607448 PDGFRBP09619 1106 aa11.06□□□□□ -0.64
LINC01001-203ENST00000607448 GLULP15104 373 aa11.06□□□□□ -0.64
LINC01001-203ENST00000607448 RAP1GAPP47736 663 aa11.06□□□□□ -0.64
LINC01001-203ENST00000607448 LHX1P48742 406 aa11.06□□□□□ -0.64
LINC01001-203ENST00000607448 MXI1P50539 228 aa11.06□□□□□ -0.64
LINC01001-203ENST00000607448 CLCN5P51795 746 aa11.06□□□□□ -0.64
LINC01001-203ENST00000607448 MFAP3P55082 362 aa11.06□□□□□ -0.64
LINC01001-203ENST00000607448 FAM171BQ6P995 826 aa11.06□□□□□ -0.64
LINC01001-203ENST00000607448 MICALCLQ6ZW33 695 aa11.06□□□□□ -0.64
LINC01001-203ENST00000607448 DPH6Q7L8W6 267 aa11.06□□□□□ -0.64
LINC01001-203ENST00000607448 CROCCP2Q86T23 111 aa11.06□□□□□ -0.64
LINC01001-203ENST00000607448 LEMD2Q8NC56 503 aa11.06□□□□□ -0.64
LINC01001-203ENST00000607448 SMARCD2Q92925 531 aa11.06□□□□□ -0.64
LINC01001-203ENST00000607448 SYT15Q9BQS2 421 aa11.06□□□□□ -0.64
LINC01001-203ENST00000607448 FAM129AQ9BZQ8 928 aa11.06□□□□□ -0.64
LINC01001-203ENST00000607448 SMG9Q9H0W8 520 aaKnown RBP11.06□□□□□ -0.64
LINC01001-203ENST00000607448 ATXN3LQ9H3M9 355 aa11.06□□□□□ -0.64
LINC01001-203ENST00000607448 ZFP14Q9HCL3 533 aa11.06□□□□□ -0.64
LINC01001-203ENST00000607448 OSGEPQ9NPF4 335 aa11.06□□□□□ -0.64
LINC01001-203ENST00000607448 HEBP1Q9NRV9 189 aa11.06□□□□□ -0.64
LINC01001-203ENST00000607448 SEPT11Q9NVA2 429 aaKnown RBP11.06□□□□□ -0.64
LINC01001-203ENST00000607448 AMACRQ9UHK6 382 aa11.06□□□□□ -0.64
LINC01001-203ENST00000607448 ASB3Q9Y575 518 aa11.06□□□□□ -0.64
LINC01001-203ENST00000607448 FANCMQ8IYD8 2048 aa11.05□□□□□ -0.64
LINC01001-203ENST00000607448 A0A087WUV0 522 aaPredicted RBP11.05□□□□□ -0.64
LINC01001-203ENST00000607448 STK25O00506 426 aa11.05□□□□□ -0.64
LINC01001-203ENST00000607448 GALR2O43603 387 aaPredicted RBP11.05□□□□□ -0.64
LINC01001-203ENST00000607448 PRAMEF12O95522 483 aa11.05□□□□□ -0.64
LINC01001-203ENST00000607448 ABCB4P21439 1286 aa11.05□□□□□ -0.64
LINC01001-203ENST00000607448 WARSP23381 471 aaKnown RBP11.05□□□□□ -0.64
LINC01001-203ENST00000607448 CTNNA1P35221 906 aaKnown RBP11.05□□□□□ -0.64
LINC01001-203ENST00000607448 MDH1P40925 334 aaKnown RBP11.05□□□□□ -0.64
LINC01001-203ENST00000607448 CCT5P48643 541 aa11.05□□□□□ -0.64
LINC01001-203ENST00000607448 CACNA2D1P54289 1103 aa11.05□□□□□ -0.64
LINC01001-203ENST00000607448 CDH8P55286 799 aa11.05□□□□□ -0.64
LINC01001-203ENST00000607448 PPP3CAQ08209 521 aa11.05□□□□□ -0.64
LINC01001-203ENST00000607448 SMARCB1Q12824 385 aa11.05□□□□□ -0.64
LINC01001-203ENST00000607448 MLF2Q15773 248 aaPredicted RBP11.05□□□□□ -0.64
LINC01001-203ENST00000607448 SLC44A4Q53GD3 710 aa11.05□□□□□ -0.64
LINC01001-203ENST00000607448 GPR158Q5T848 1215 aa11.05□□□□□ -0.64
LINC01001-203ENST00000607448 SCARA5Q6ZMJ2 495 aa11.05□□□□□ -0.64
LINC01001-203ENST00000607448 ITIH5Q86UX2 942 aa11.05□□□□□ -0.64
LINC01001-203ENST00000607448 FAM71AQ8IYT1 594 aa11.05□□□□□ -0.64
LINC01001-203ENST00000607448 MYLPFQ96A32 169 aa11.05□□□□□ -0.64
LINC01001-203ENST00000607448 ARHGEF26Q96DR7 871 aa11.05□□□□□ -0.64
LINC01001-203ENST00000607448 PCED1BQ96HM7 432 aa11.05□□□□□ -0.64
LINC01001-203ENST00000607448 THAP2Q9H0W7 228 aa11.05□□□□□ -0.64
LINC01001-203ENST00000607448 SDCBP2Q9H190 292 aa11.05□□□□□ -0.64
LINC01001-203ENST00000607448 EPN3Q9H201 632 aa11.05□□□□□ -0.64
LINC01001-203ENST00000607448 SMYD3Q9H7B4 428 aa11.05□□□□□ -0.64
LINC01001-203ENST00000607448 TRPV4Q9HBA0 871 aa11.05□□□□□ -0.64
LINC01001-203ENST00000607448 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.05□□□□□ -0.64
LINC01001-203ENST00000607448 TMEM30AQ9NV96 361 aa11.05□□□□□ -0.64
LINC01001-203ENST00000607448 DLGAP2Q9P1A6 1054 aa11.05□□□□□ -0.64
LINC01001-203ENST00000607448 CTTNBP2NLQ9P2B4 639 aa11.05□□□□□ -0.64
LINC01001-203ENST00000607448 NXF1Q9UBU9 619 aaKnown RBP11.05□□□□□ -0.64
LINC01001-203ENST00000607448 LCMT1Q9UIC8 334 aa11.05□□□□□ -0.64
LINC01001-203ENST00000607448 GGA2Q9UJY4 613 aa11.05□□□□□ -0.64
LINC01001-203ENST00000607448 MAGED2Q9UNF1 606 aaPredicted RBP11.05□□□□□ -0.64
LINC01001-203ENST00000607448 COQ4Q9Y3A0 265 aa11.05□□□□□ -0.64
LINC01001-203ENST00000607448 NFS1Q9Y697 457 aa11.05□□□□□ -0.64
LINC01001-203ENST00000607448 FRYLO94915 3013 aa11.04□□□□□ -0.64
LINC01001-203ENST00000607448 HEPACAM2A8MVW5 462 aa11.04□□□□□ -0.64
LINC01001-203ENST00000607448 ARNTLO00327 626 aa11.04□□□□□ -0.64
LINC01001-203ENST00000607448 TTI1O43156 1089 aa11.04□□□□□ -0.64
LINC01001-203ENST00000607448 DAPK3O43293 454 aa11.04□□□□□ -0.64
LINC01001-203ENST00000607448 PHF2O75151 1096 aa11.04□□□□□ -0.64
LINC01001-203ENST00000607448 PPFIA2O75334 1257 aa11.04□□□□□ -0.64
LINC01001-203ENST00000607448 STAU1O95793 577 aaKnown RBP11.04□□□□□ -0.64
LINC01001-203ENST00000607448 FTLP02792 175 aaPredicted RBP11.04□□□□□ -0.64
LINC01001-203ENST00000607448 F11P03951 625 aa11.04□□□□□ -0.64
LINC01001-203ENST00000607448 PSMC3P17980 439 aa11.04□□□□□ -0.64
LINC01001-203ENST00000607448 CTNNA2P26232 953 aa11.04□□□□□ -0.64
LINC01001-203ENST00000607448 CHRNA3P32297 505 aa11.04□□□□□ -0.64
LINC01001-203ENST00000607448 LSP1P33241 339 aa11.04□□□□□ -0.64
LINC01001-203ENST00000607448 PTPN5P54829 565 aa11.04□□□□□ -0.64
LINC01001-203ENST00000607448 STARD6P59095 220 aa11.04□□□□□ -0.64
LINC01001-203ENST00000607448 DR1Q01658 176 aa11.04□□□□□ -0.64
LINC01001-203ENST00000607448 TRPC3Q13507 836 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms