RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 PCDH19Q8TAB3 1148 aa22.43■■□□□ 1.18
USP6NL-204ENST00000606752 NTAN1Q96AB6 310 aa22.43■■□□□ 1.18
USP6NL-204ENST00000606752 KCTD15Q96SI1 283 aaPredicted RBP22.43■■□□□ 1.18
USP6NL-204ENST00000606752 NEUROG2Q9H2A3 272 aa22.43■■□□□ 1.18
USP6NL-204ENST00000606752 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP22.43■■□□□ 1.181e-6■■■■□ 23.2
USP6NL-204ENST00000606752 SPG21Q9NZD8 308 aa22.43■■□□□ 1.18
USP6NL-204ENST00000606752 IL37Q9NZH6 218 aa22.43■■□□□ 1.18
USP6NL-204ENST00000606752 FBXW11Q9UKB1 542 aa22.43■■□□□ 1.18
USP6NL-204ENST00000606752 SLC27A5Q9Y2P5 690 aa22.43■■□□□ 1.18
USP6NL-204ENST00000606752 ADRA1BP35368 520 aa22.43■■□□□ 1.18
USP6NL-204ENST00000606752 SLC9A4Q6AI14 798 aa22.43■■□□□ 1.18
USP6NL-204ENST00000606752 SCD5Q86SK9 330 aa22.43■■□□□ 1.18
USP6NL-204ENST00000606752 PQLC3Q8N755 202 aa22.43■■□□□ 1.18
USP6NL-204ENST00000606752 BADQ92934 168 aa22.43■■□□□ 1.18
USP6NL-204ENST00000606752 SPATA17Q96L03 361 aa22.43■■□□□ 1.18
USP6NL-204ENST00000606752 MAGEB5Q9BZ81 275 aa22.43■■□□□ 1.18
USP6NL-204ENST00000606752 CRISPLD1Q9H336 500 aa22.43■■□□□ 1.18
USP6NL-204ENST00000606752 FAM204AQ9H8W3 233 aa22.43■■□□□ 1.18
USP6NL-204ENST00000606752 GRHL1Q9NZI5 618 aa22.43■■□□□ 1.18
USP6NL-204ENST00000606752 RCOR3Q9P2K3 495 aaPredicted RBP22.43■■□□□ 1.18
USP6NL-204ENST00000606752 ZBBXA8MT70 800 aa22.42■■□□□ 1.18
USP6NL-204ENST00000606752 APOL1O14791 398 aa22.42■■□□□ 1.18
USP6NL-204ENST00000606752 ADAM12O43184 909 aa22.42■■□□□ 1.18
USP6NL-204ENST00000606752 OR1D2P34982 312 aa22.42■■□□□ 1.18
USP6NL-204ENST00000606752 FPGSQ05932 587 aa22.42■■□□□ 1.18
USP6NL-204ENST00000606752 DUSP4Q13115 394 aa22.42■■□□□ 1.18
USP6NL-204ENST00000606752 ALLCQ8N6M5 410 aa22.42■■□□□ 1.18
USP6NL-204ENST00000606752 PLD5Q8N7P1 536 aa22.42■■□□□ 1.18
USP6NL-204ENST00000606752 CCDC89Q8N998 374 aa22.42■■□□□ 1.18
USP6NL-204ENST00000606752 DQX1Q8TE96 717 aaKnown RBP22.42■■□□□ 1.18
USP6NL-204ENST00000606752 P3H4Q92791 437 aa22.42■■□□□ 1.18
USP6NL-204ENST00000606752 SEPT5Q99719 369 aaPredicted RBP22.42■■□□□ 1.18
USP6NL-204ENST00000606752 ZDHHC18Q9NUE0 388 aa22.42■■□□□ 1.18
USP6NL-204ENST00000606752 ASIC3Q9UHC3 531 aa22.42■■□□□ 1.18
USP6NL-204ENST00000606752 WDR27A2RRH5 827 aa22.41■■□□□ 1.18
USP6NL-204ENST00000606752 RTN3O95197 1032 aaPredicted RBP22.41■■□□□ 1.18
USP6NL-204ENST00000606752 PECAM1P16284 738 aaPredicted RBP22.41■■□□□ 1.18
USP6NL-204ENST00000606752 TGM2P21980 687 aa22.41■■□□□ 1.18
USP6NL-204ENST00000606752 ARL4AP40617 200 aa22.41■■□□□ 1.18
USP6NL-204ENST00000606752 CXCR3P49682 368 aa22.41■■□□□ 1.18
USP6NL-204ENST00000606752 RPL10AP62906 217 aaKnown RBP22.41■■□□□ 1.18
USP6NL-204ENST00000606752 ROR1Q01973 937 aa22.41■■□□□ 1.18
USP6NL-204ENST00000606752 DSG1Q02413 1049 aa22.41■■□□□ 1.18
USP6NL-204ENST00000606752 SCAPQ12770 1279 aa22.41■■□□□ 1.18
USP6NL-204ENST00000606752 EFHC2Q5JST6 749 aa22.41■■□□□ 1.18
USP6NL-204ENST00000606752 DENND5BQ6ZUT9 1274 aa22.41■■□□□ 1.18
USP6NL-204ENST00000606752 PYROXD2Q8N2H3 581 aa22.41■■□□□ 1.18
USP6NL-204ENST00000606752 ARHGAP18Q8N392 663 aa22.41■■□□□ 1.18
USP6NL-204ENST00000606752 CSPG4P5Q96PW8 444 aa22.41■■□□□ 1.18
USP6NL-204ENST00000606752 FAM129AQ9BZQ8 928 aa22.41■■□□□ 1.18
USP6NL-204ENST00000606752 VIPAS39Q9H9C1 493 aa22.41■■□□□ 1.18
USP6NL-204ENST00000606752 CWC15Q9P013 229 aaKnown RBP22.41■■□□□ 1.18
USP6NL-204ENST00000606752 PATJQ8NI35 1801 aa22.41■■□□□ 1.18
USP6NL-204ENST00000606752 FAM92AA1XBS5 289 aa22.41■■□□□ 1.18
USP6NL-204ENST00000606752 C2CD2LO14523 706 aa22.41■■□□□ 1.18
USP6NL-204ENST00000606752 SOAT2O75908 522 aa22.41■■□□□ 1.18
USP6NL-204ENST00000606752 IGLV3-25P01717 112 aa22.41■■□□□ 1.18
USP6NL-204ENST00000606752 KRT14P02533 472 aa22.41■■□□□ 1.18
USP6NL-204ENST00000606752 ZFXP17010 805 aaPredicted RBP22.41■■□□□ 1.18
USP6NL-204ENST00000606752 RPL17P18621 184 aaKnown RBP22.41■■□□□ 1.18
USP6NL-204ENST00000606752 PLTPP55058 493 aa22.41■■□□□ 1.18
USP6NL-204ENST00000606752 NOMO1Q15155 1222 aa22.41■■□□□ 1.18
USP6NL-204ENST00000606752 ARL13BQ3SXY8 428 aa22.41■■□□□ 1.18
USP6NL-204ENST00000606752 ZDHHC24Q6UX98 284 aa22.41■■□□□ 1.18
USP6NL-204ENST00000606752 DDX53Q86TM3 631 aaKnown RBP22.41■■□□□ 1.18
USP6NL-204ENST00000606752 TAC4Q86UU9 113 aa22.41■■□□□ 1.18
USP6NL-204ENST00000606752 CCHCR1Q8TD31 782 aa22.41■■□□□ 1.18
USP6NL-204ENST00000606752 TMEM121Q9BTD3 319 aa22.41■■□□□ 1.18
USP6NL-204ENST00000606752 HERC2P3Q9BVR0 1158 aa22.41■■□□□ 1.18
USP6NL-204ENST00000606752 WDCPQ9H6R7 721 aa22.41■■□□□ 1.18
USP6NL-204ENST00000606752 PRDM16Q9HAZ2 1276 aa22.41■■□□□ 1.18
USP6NL-204ENST00000606752 NMUR1Q9HB89 426 aa22.41■■□□□ 1.18
USP6NL-204ENST00000606752 COMMD8Q9NX08 183 aa22.41■■□□□ 1.18
USP6NL-204ENST00000606752 WHRNQ9P202 907 aa22.41■■□□□ 1.18
USP6NL-204ENST00000606752 COL4A4P53420 1690 aaPredicted RBP22.4■■□□□ 1.18
USP6NL-204ENST00000606752 A0A1W2PQH9 124 aa22.4■■□□□ 1.18
USP6NL-204ENST00000606752 MCF2LO15068 1137 aa22.4■■□□□ 1.18
USP6NL-204ENST00000606752 ITIH2P19823 946 aa22.4■■□□□ 1.18
USP6NL-204ENST00000606752 IVDP26440 423 aa22.4■■□□□ 1.18
USP6NL-204ENST00000606752 KLRC2P26717 231 aa22.4■■□□□ 1.18
USP6NL-204ENST00000606752 YWHAQP27348 245 aa22.4■■□□□ 1.18
USP6NL-204ENST00000606752 GLUD2P49448 558 aa22.4■■□□□ 1.18
USP6NL-204ENST00000606752 PGFP49763 221 aa22.4■■□□□ 1.18
USP6NL-204ENST00000606752 EIF3EP60228 445 aaKnown RBP22.4■■□□□ 1.18
USP6NL-204ENST00000606752 USP46P62068 366 aa22.4■■□□□ 1.18
USP6NL-204ENST00000606752 CALCOCO2Q13137 446 aa22.4■■□□□ 1.18
USP6NL-204ENST00000606752 TRIP13Q15645 432 aaPredicted RBP22.4■■□□□ 1.18
USP6NL-204ENST00000606752 STKLD1Q8NE28 680 aa22.4■■□□□ 1.18
USP6NL-204ENST00000606752 FMO2Q99518 471 aa22.4■■□□□ 1.18
USP6NL-204ENST00000606752 CLSTN3Q9BQT9 956 aa22.4■■□□□ 1.18
USP6NL-204ENST00000606752 AAASQ9NRG9 546 aa22.4■■□□□ 1.18
USP6NL-204ENST00000606752 TMPRSS4Q9NRS4 437 aa22.4■■□□□ 1.18
USP6NL-204ENST00000606752 GJB5O95377 273 aa22.39■■□□□ 1.17
USP6NL-204ENST00000606752 PPM1AP35813 382 aa22.39■■□□□ 1.17
USP6NL-204ENST00000606752 ADCY8P40145 1251 aa22.39■■□□□ 1.17
USP6NL-204ENST00000606752 EIF4EBP2Q13542 120 aaPredicted RBP22.39■■□□□ 1.17
USP6NL-204ENST00000606752 C1orf228Q6PIY5 440 aa22.39■■□□□ 1.17
USP6NL-204ENST00000606752 NPNTQ6UXI9 565 aa22.39■■□□□ 1.17
USP6NL-204ENST00000606752 MREGQ8N565 214 aa22.39■■□□□ 1.17
USP6NL-204ENST00000606752 FBXO25Q8TCJ0 367 aa22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms