RNA–Protein interactions for RNA: ENST00000600935.1

NUP62-222, Transcript of nucleoporin 62, human

TSL 4

Gene NUP62, Length 587 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP62-222	ENST00000600935	MFAP3	P55082	362 aa		11.67	□□□□□ -0.54
NUP62-222	ENST00000600935	DNAJC3	Q13217	504 aa		11.67	□□□□□ -0.54
NUP62-222	ENST00000600935		Q6ZNB5	142 aa		11.67	□□□□□ -0.54
NUP62-222	ENST00000600935	DYM	Q7RTS9	669 aa		11.67	□□□□□ -0.54
NUP62-222	ENST00000600935	FAM124A	Q86V42	546 aa		11.67	□□□□□ -0.54
NUP62-222	ENST00000600935	ERICH1	Q86X53	443 aa		11.67	□□□□□ -0.54
NUP62-222	ENST00000600935	SPACA3	Q8IXA5	215 aa		11.67	□□□□□ -0.54
NUP62-222	ENST00000600935	B3GALNT2	Q8NCR0	500 aa		11.67	□□□□□ -0.54
NUP62-222	ENST00000600935	ZMIZ2	Q8NF64	920 aa		11.67	□□□□□ -0.54
NUP62-222	ENST00000600935	OR6B3	Q8NGW1	331 aa		11.67	□□□□□ -0.54
NUP62-222	ENST00000600935	SNX19	Q92543	992 aa		11.67	□□□□□ -0.54
NUP62-222	ENST00000600935	PRCC	Q92733	491 aa	Predicted RBP	11.67	□□□□□ -0.54
NUP62-222	ENST00000600935	DNAJC19	Q96DA6	116 aa		11.67	□□□□□ -0.54
NUP62-222	ENST00000600935	ACCS	Q96QU6	501 aa		11.67	□□□□□ -0.54
NUP62-222	ENST00000600935	NRSN2	Q9GZP1	204 aa		11.67	□□□□□ -0.54
NUP62-222	ENST00000600935	SNX25	Q9H3E2	840 aa		11.67	□□□□□ -0.54
NUP62-222	ENST00000600935	CLMP	Q9H6B4	373 aa		11.67	□□□□□ -0.54
NUP62-222	ENST00000600935	MRPL44	Q9H9J2	332 aa	Known RBP	11.67	□□□□□ -0.54
NUP62-222	ENST00000600935	OSER1	Q9NX31	292 aa		11.67	□□□□□ -0.54
NUP62-222	ENST00000600935	TBC1D7	Q9P0N9	293 aa		11.67	□□□□□ -0.54
NUP62-222	ENST00000600935	PENK	P01210	267 aa	Predicted RBP	11.66	□□□□□ -0.54
NUP62-222	ENST00000600935	HNF1B	P35680	557 aa		11.66	□□□□□ -0.54
NUP62-222	ENST00000600935	ACADVL	P49748	655 aa		11.66	□□□□□ -0.54
NUP62-222	ENST00000600935	CXADR	P78310	365 aa		11.66	□□□□□ -0.54
NUP62-222	ENST00000600935	ZNF234	Q14588	700 aa		11.66	□□□□□ -0.54
NUP62-222	ENST00000600935	SHB	Q15464	509 aa		11.66	□□□□□ -0.54
NUP62-222	ENST00000600935	HES3	Q5TGS1	186 aa		11.66	□□□□□ -0.54
NUP62-222	ENST00000600935	FYB2	Q5VWT5	728 aa		11.66	□□□□□ -0.54
NUP62-222	ENST00000600935	FBXL19	Q6PCT2	694 aa		11.66	□□□□□ -0.54
NUP62-222	ENST00000600935	USP49	Q70CQ1	688 aa		11.66	□□□□□ -0.54
NUP62-222	ENST00000600935	TRAPPC11	Q7Z392	1133 aa		11.66	□□□□□ -0.54
NUP62-222	ENST00000600935	FAM35A	Q86V20	835 aa		11.66	□□□□□ -0.54
NUP62-222	ENST00000600935	CBWD2	Q8IUF1	395 aa		11.66	□□□□□ -0.54
NUP62-222	ENST00000600935	FMNL3	Q8IVF7	1028 aa		11.66	□□□□□ -0.54
NUP62-222	ENST00000600935	GPD1L	Q8N335	351 aa		11.66	□□□□□ -0.54
NUP62-222	ENST00000600935	KRI1	Q8N9T8	703 aa	Known RBP	11.66	□□□□□ -0.54
NUP62-222	ENST00000600935	BIRC7	Q96CA5	298 aa		11.66	□□□□□ -0.54
NUP62-222	ENST00000600935	CYLD	Q9NQC7	956 aa		11.66	□□□□□ -0.54
NUP62-222	ENST00000600935	SEL1L	Q9UBV2	794 aa		11.66	□□□□□ -0.54
NUP62-222	ENST00000600935	EXOC7	Q9UPT5	735 aa		11.66	□□□□□ -0.54
NUP62-222	ENST00000600935	AK5	Q9Y6K8	562 aa		11.66	□□□□□ -0.54
NUP62-222	ENST00000600935		A0A1B0GTQ1	180 aa		11.65	□□□□□ -0.54
NUP62-222	ENST00000600935	CAPN8	A6NHC0	703 aa		11.65	□□□□□ -0.54
NUP62-222	ENST00000600935	ENC1	O14682	589 aa		11.65	□□□□□ -0.54
NUP62-222	ENST00000600935	NPC1	O15118	1278 aa		11.65	□□□□□ -0.54
NUP62-222	ENST00000600935	BRINP1	O60477	761 aa		11.65	□□□□□ -0.54
NUP62-222	ENST00000600935	TSPAN3	O60637	253 aa		11.65	□□□□□ -0.54
NUP62-222	ENST00000600935	RFPL3	O75679	317 aa		11.65	□□□□□ -0.54
NUP62-222	ENST00000600935	BEST1	O76090	585 aa		11.65	□□□□□ -0.54
NUP62-222	ENST00000600935	TNNC2	P02585	160 aa		11.65	□□□□□ -0.54
NUP62-222	ENST00000600935	FAM163B	P0C2L3	166 aa		11.65	□□□□□ -0.54
NUP62-222	ENST00000600935	CCDC173	Q0VFZ6	552 aa		11.65	□□□□□ -0.54
NUP62-222	ENST00000600935	ORC1	Q13415	861 aa		11.65	□□□□□ -0.54
NUP62-222	ENST00000600935	TEAD4	Q15561	434 aa		11.65	□□□□□ -0.54
NUP62-222	ENST00000600935	DUOXA2	Q1HG44	320 aa		11.65	□□□□□ -0.54
NUP62-222	ENST00000600935	TMEM215	Q68D42	235 aa		11.65	□□□□□ -0.54
NUP62-222	ENST00000600935	GATAD2A	Q86YP4	633 aa		11.65	□□□□□ -0.54
NUP62-222	ENST00000600935	NOC3L	Q8WTT2	800 aa	Known RBP	11.65	□□□□□ -0.54
NUP62-222	ENST00000600935	SORCS1	Q8WY21	1168 aa		11.65	□□□□□ -0.54
NUP62-222	ENST00000600935	BAP1	Q92560	729 aa		11.65	□□□□□ -0.54
NUP62-222	ENST00000600935	TSC1	Q92574	1164 aa		11.65	□□□□□ -0.54
NUP62-222	ENST00000600935	FGF11	Q92914	225 aa		11.65	□□□□□ -0.54
NUP62-222	ENST00000600935	TMEM176A	Q96HP8	235 aa		11.65	□□□□□ -0.54
NUP62-222	ENST00000600935	PIWIL1	Q96J94	861 aa	Known RBP	11.65	□□□□□ -0.54
NUP62-222	ENST00000600935	SMO	Q99835	787 aa		11.65	□□□□□ -0.54
NUP62-222	ENST00000600935	NACA2	Q9H009	215 aa		11.65	□□□□□ -0.54
NUP62-222	ENST00000600935	DMAP1	Q9NPF5	467 aa	Predicted RBP	11.65	□□□□□ -0.54
NUP62-222	ENST00000600935	OLFML3	Q9NRN5	406 aa		11.65	□□□□□ -0.54
NUP62-222	ENST00000600935	CLEC4E	Q9ULY5	219 aa		11.65	□□□□□ -0.54
NUP62-222	ENST00000600935		A8MXQ7	604 aa		11.64	□□□□□ -0.55
NUP62-222	ENST00000600935	MDM4	O15151	490 aa		11.64	□□□□□ -0.55
NUP62-222	ENST00000600935	SYNCRIP	O60506	623 aa	Known RBP	11.64	□□□□□ -0.55
NUP62-222	ENST00000600935	GCNT3	O95395	438 aa		11.64	□□□□□ -0.55
NUP62-222	ENST00000600935	KLKB1	P03952	638 aa		11.64	□□□□□ -0.55
NUP62-222	ENST00000600935	C1S	P09871	688 aa		11.64	□□□□□ -0.55
NUP62-222	ENST00000600935	ACADM	P11310	421 aa		11.64	□□□□□ -0.55
NUP62-222	ENST00000600935	CD27	P26842	260 aa		11.64	□□□□□ -0.55
NUP62-222	ENST00000600935	CDH8	P55286	799 aa		11.64	□□□□□ -0.55
NUP62-222	ENST00000600935	SRSF1	Q07955	248 aa	Known RBP eCLIP	11.64	□□□□□ -0.55
NUP62-222	ENST00000600935	WDR72	Q3MJ13	1102 aa		11.64	□□□□□ -0.55
NUP62-222	ENST00000600935	PRAMEF14	Q5SWL7	426 aa		11.64	□□□□□ -0.55
NUP62-222	ENST00000600935	WDR49	Q8IV35	697 aa		11.64	□□□□□ -0.55
NUP62-222	ENST00000600935	FUK	Q8N0W3	1084 aa		11.64	□□□□□ -0.55
NUP62-222	ENST00000600935	FAM181A	Q8N9Y4	354 aa		11.64	□□□□□ -0.55
NUP62-222	ENST00000600935	ENGASE	Q8NFI3	743 aa		11.64	□□□□□ -0.55
NUP62-222	ENST00000600935	WBP1	Q96G27	269 aa		11.64	□□□□□ -0.55
NUP62-222	ENST00000600935	CNDP2	Q96KP4	475 aa	Known RBP	11.64	□□□□□ -0.55
NUP62-222	ENST00000600935	GZF1	Q9H116	711 aa	Predicted RBP	11.64	□□□□□ -0.55
NUP62-222	ENST00000600935	XYLT2	Q9H1B5	865 aa		11.64	□□□□□ -0.55
NUP62-222	ENST00000600935	NMUR1	Q9HB89	426 aa		11.64	□□□□□ -0.55
NUP62-222	ENST00000600935	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	11.64	□□□□□ -0.55	3e-6	■■■■■ 55.1
NUP62-222	ENST00000600935	COMMD8	Q9NX08	183 aa		11.64	□□□□□ -0.55
NUP62-222	ENST00000600935	ELOVL2	Q9NXB9	296 aa		11.64	□□□□□ -0.55
NUP62-222	ENST00000600935	R3HCC1	Q9Y3T6	440 aa	Known RBP	11.64	□□□□□ -0.55
NUP62-222	ENST00000600935	FRMD3	A2A2Y4	597 aa		11.63	□□□□□ -0.55
NUP62-222	ENST00000600935		B8ZZF3	427 aa		11.63	□□□□□ -0.55
NUP62-222	ENST00000600935	STC2	O76061	302 aa		11.63	□□□□□ -0.55
NUP62-222	ENST00000600935	SEMA4F	O95754	770 aa		11.63	□□□□□ -0.55
NUP62-222	ENST00000600935	IGHV4-34	P06331	123 aa		11.63	□□□□□ -0.55
NUP62-222	ENST00000600935	EPHX1	P07099	455 aa		11.63	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms