RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 MARCH2Q9P0N8 246 aa16.57■□□□□ 0.24
VRK3-221ENST00000600284 SDK1Q7Z5N4 2213 aa16.56■□□□□ 0.24
VRK3-221ENST00000600284 GFRA2O00451 464 aa16.56■□□□□ 0.24
VRK3-221ENST00000600284 TRIM24O15164 1050 aa16.56■□□□□ 0.24
VRK3-221ENST00000600284 GADD45BO75293 160 aaPredicted RBP16.56■□□□□ 0.24
VRK3-221ENST00000600284 CAVIN2O95810 425 aa16.56■□□□□ 0.24
VRK3-221ENST00000600284 PENKP01210 267 aaPredicted RBP16.56■□□□□ 0.24
VRK3-221ENST00000600284 GCNT1Q02742 428 aa16.56■□□□□ 0.24
VRK3-221ENST00000600284 PAK1Q13153 545 aa16.56■□□□□ 0.24
VRK3-221ENST00000600284 CNGA2Q16280 664 aa16.56■□□□□ 0.24
VRK3-221ENST00000600284 PKDCCQ504Y2 493 aa16.56■□□□□ 0.24
VRK3-221ENST00000600284 TMEM270Q6UE05 265 aa16.56■□□□□ 0.24
VRK3-221ENST00000600284 EHBP1Q8NDI1 1231 aa16.56■□□□□ 0.24
VRK3-221ENST00000600284 PLD4Q96BZ4 506 aa16.56■□□□□ 0.24
VRK3-221ENST00000600284 IPO9Q96P70 1041 aaKnown RBP16.56■□□□□ 0.24
VRK3-221ENST00000600284 CNGB3Q9NQW8 809 aa16.56■□□□□ 0.24
VRK3-221ENST00000600284 BCCIPQ9P287 314 aaKnown RBP eCLIP16.56■□□□□ 0.24
VRK3-221ENST00000600284 AGO1Q9UL18 857 aaKnown RBP16.56■□□□□ 0.24
VRK3-221ENST00000600284 HCN2Q9UL51 889 aa16.56■□□□□ 0.24
VRK3-221ENST00000600284 INVSQ9Y283 1065 aa16.56■□□□□ 0.24
VRK3-221ENST00000600284 SLC27A6Q9Y2P4 619 aa16.56■□□□□ 0.24
VRK3-221ENST00000600284 TCRBV21S2A2A0A5A6 115 aa16.55■□□□□ 0.24
VRK3-221ENST00000600284 SLC12A8A0AV02 714 aa16.55■□□□□ 0.24
VRK3-221ENST00000600284 TULP2O00295 520 aa16.55■□□□□ 0.24
VRK3-221ENST00000600284 NPC1O15118 1278 aa16.55■□□□□ 0.24
VRK3-221ENST00000600284 ZBTB24O43167 697 aaPredicted RBP16.55■□□□□ 0.24
VRK3-221ENST00000600284 FGFR1OPO95684 399 aaKnown RBP16.55■□□□□ 0.24
VRK3-221ENST00000600284 CORO1AP31146 461 aaKnown RBP16.55■□□□□ 0.24
VRK3-221ENST00000600284 CREB5Q02930 508 aa16.55■□□□□ 0.24
VRK3-221ENST00000600284 KCNH2Q12809 1159 aa16.55■□□□□ 0.24
VRK3-221ENST00000600284 E2F5Q15329 346 aa16.55■□□□□ 0.24
VRK3-221ENST00000600284 CCDC6Q16204 474 aa16.55■□□□□ 0.24
VRK3-221ENST00000600284 FYB2Q5VWT5 728 aa16.55■□□□□ 0.24
VRK3-221ENST00000600284 IL31Q6EBC2 164 aa16.55■□□□□ 0.24
VRK3-221ENST00000600284 BHLHA9Q7RTU4 235 aa16.55■□□□□ 0.24
VRK3-221ENST00000600284 TRIM59Q8IWR1 403 aa16.55■□□□□ 0.24
VRK3-221ENST00000600284 PPM1KQ8N3J5 372 aa16.55■□□□□ 0.24
VRK3-221ENST00000600284 CPXM2Q8N436 756 aa16.55■□□□□ 0.24
VRK3-221ENST00000600284 UBA3Q8TBC4 463 aa16.55■□□□□ 0.24
VRK3-221ENST00000600284 SLC35F5Q8WV83 523 aa16.55■□□□□ 0.24
VRK3-221ENST00000600284 HMGB4Q8WW32 186 aa16.55■□□□□ 0.24
VRK3-221ENST00000600284 ABCC13Q9NSE7 274 aa16.55■□□□□ 0.24
VRK3-221ENST00000600284 CTNND2Q9UQB3 1225 aa16.55■□□□□ 0.24
VRK3-221ENST00000600284 PCDHB4Q9Y5E5 795 aa16.55■□□□□ 0.24
VRK3-221ENST00000600284 PRRT4C9JH25 899 aa16.54■□□□□ 0.24
VRK3-221ENST00000600284 BIN1O00499 593 aa16.54■□□□□ 0.24
VRK3-221ENST00000600284 MAP3K13O43283 966 aa16.54■□□□□ 0.24
VRK3-221ENST00000600284 CYBBP04839 570 aa16.54■□□□□ 0.24
VRK3-221ENST00000600284 HMBSP08397 361 aa16.54■□□□□ 0.24
VRK3-221ENST00000600284 HOXB2P14652 356 aa16.54■□□□□ 0.24
VRK3-221ENST00000600284 BCKDHBP21953 392 aa16.54■□□□□ 0.24
VRK3-221ENST00000600284 DPP6P42658 865 aa16.54■□□□□ 0.24
VRK3-221ENST00000600284 ADIGQ0VDE8 80 aa16.54■□□□□ 0.24
VRK3-221ENST00000600284 TRIP4Q15650 581 aaPredicted RBP16.54■□□□□ 0.24
VRK3-221ENST00000600284 MAP7D1Q3KQU3 841 aa16.54■□□□□ 0.24
VRK3-221ENST00000600284 BSPRYQ5W0U4 402 aa16.54■□□□□ 0.24
VRK3-221ENST00000600284 EGFLAMQ63HQ2 1017 aa16.54■□□□□ 0.24
VRK3-221ENST00000600284 LPCAT2Q7L5N7 544 aa16.54■□□□□ 0.24
VRK3-221ENST00000600284 DENND1CQ8IV53 801 aa16.54■□□□□ 0.24
VRK3-221ENST00000600284 FAM217AQ8IXS0 508 aa16.54■□□□□ 0.24
VRK3-221ENST00000600284 CHPFQ8IZ52 775 aa16.54■□□□□ 0.24
VRK3-221ENST00000600284 SIX6OS1Q8N1H7 587 aa16.54■□□□□ 0.24
VRK3-221ENST00000600284 PGBD3Q8N328 593 aa16.54■□□□□ 0.24
VRK3-221ENST00000600284 RNF139Q8WU17 664 aa16.54■□□□□ 0.24
VRK3-221ENST00000600284 IRGQQ8WZA9 623 aa16.54■□□□□ 0.24
VRK3-221ENST00000600284 GABRG3Q99928 467 aa16.54■□□□□ 0.24
VRK3-221ENST00000600284 SRRTQ9BXP5 876 aaKnown RBP16.54■□□□□ 0.24
VRK3-221ENST00000600284 ZDHHC4Q9NPG8 344 aa16.54■□□□□ 0.24
VRK3-221ENST00000600284 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.54■□□□□ 0.24
VRK3-221ENST00000600284 HBS1LQ9Y450 684 aaKnown RBP16.54■□□□□ 0.24
VRK3-221ENST00000600284 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.54■□□□□ 0.24
VRK3-221ENST00000600284 A0A1W2PQF6 199 aa16.53■□□□□ 0.24
VRK3-221ENST00000600284 RNF225M0QZC1 329 aaPredicted RBP16.53■□□□□ 0.24
VRK3-221ENST00000600284 TM4SF5O14894 197 aa16.53■□□□□ 0.24
VRK3-221ENST00000600284 AFPP02771 609 aaKnown RBP16.53■□□□□ 0.24
VRK3-221ENST00000600284 GABRG2P18507 467 aa16.53■□□□□ 0.24
VRK3-221ENST00000600284 HARS2P49590 506 aaKnown RBP16.53■□□□□ 0.24
VRK3-221ENST00000600284 ZNF132P52740 706 aa16.53■□□□□ 0.24
VRK3-221ENST00000600284 STX17P56962 302 aa16.53■□□□□ 0.24
VRK3-221ENST00000600284 ZNF445P59923 1031 aa16.53■□□□□ 0.24
VRK3-221ENST00000600284 UBE2HP62256 183 aa16.53■□□□□ 0.24
VRK3-221ENST00000600284 STPG1Q5TH74 334 aa16.53■□□□□ 0.24
VRK3-221ENST00000600284 TOGARAM2Q6ZUX3 1019 aa16.53■□□□□ 0.24
VRK3-221ENST00000600284 CYP2U1Q7Z449 544 aa16.53■□□□□ 0.24
VRK3-221ENST00000600284 RLN3Q8WXF3 142 aa16.53■□□□□ 0.24
VRK3-221ENST00000600284 TFAP2BQ92481 460 aa16.53■□□□□ 0.24
VRK3-221ENST00000600284 HSFY1Q96LI6 401 aa16.53■□□□□ 0.24
VRK3-221ENST00000600284 SLC2A11Q9BYW1 496 aa16.53■□□□□ 0.24
VRK3-221ENST00000600284 CD248Q9HCU0 757 aa16.53■□□□□ 0.24
VRK3-221ENST00000600284 RXFP3Q9NSD7 469 aa16.53■□□□□ 0.24
VRK3-221ENST00000600284 PLK2Q9NYY3 685 aa16.53■□□□□ 0.24
VRK3-221ENST00000600284 KIAA1468Q9P260 1216 aa16.53■□□□□ 0.24
VRK3-221ENST00000600284 STOML2Q9UJZ1 356 aa16.53■□□□□ 0.24
VRK3-221ENST00000600284 MYO18AQ92614 2054 aaKnown RBP16.53■□□□□ 0.24
VRK3-221ENST00000600284 YJEFN3A6XGL0 299 aa16.52■□□□□ 0.24
VRK3-221ENST00000600284 E7ENQ6 273 aa16.52■□□□□ 0.24
VRK3-221ENST00000600284 KHNYNO15037 678 aaKnown RBP16.52■□□□□ 0.24
VRK3-221ENST00000600284 ZNF217O75362 1048 aa16.52■□□□□ 0.24
VRK3-221ENST00000600284 LATS1O95835 1130 aa16.52■□□□□ 0.24
VRK3-221ENST00000600284 DHPSP49366 369 aaPredicted RBP16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms