RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 SLC2A14Q8TDB8 520 aa6.45□□□□□ -1.38
VRK3-220ENST00000600259 FOXJ1Q92949 421 aa6.45□□□□□ -1.38
VRK3-220ENST00000600259 PIWIL1Q96J94 861 aaKnown RBP6.45□□□□□ -1.38
VRK3-220ENST00000600259 TNIP3Q96KP6 325 aa6.45□□□□□ -1.38
VRK3-220ENST00000600259 XPO6Q96QU8 1125 aaKnown RBP6.45□□□□□ -1.38
VRK3-220ENST00000600259 TWNKQ96RR1 684 aa6.45□□□□□ -1.38
VRK3-220ENST00000600259 HNRNPABQ99729 332 aaKnown RBP6.45□□□□□ -1.38
VRK3-220ENST00000600259 BBS2Q9BXC9 721 aa6.45□□□□□ -1.38
VRK3-220ENST00000600259 CCDC86Q9H6F5 360 aaKnown RBP6.45□□□□□ -1.38
VRK3-220ENST00000600259 TLR8Q9NR97 1041 aaKnown RBP6.45□□□□□ -1.38
VRK3-220ENST00000600259 PLK2Q9NYY3 685 aa6.45□□□□□ -1.38
VRK3-220ENST00000600259 HMGXB4Q9UGU5 601 aa6.45□□□□□ -1.38
VRK3-220ENST00000600259 NUDT5Q9UKK9 219 aa6.45□□□□□ -1.38
VRK3-220ENST00000600259 CLEC4EQ9ULY5 219 aa6.45□□□□□ -1.38
VRK3-220ENST00000600259 USP3Q9Y6I4 520 aa6.45□□□□□ -1.38
VRK3-220ENST00000600259 KNTC1P50748 2209 aa6.45□□□□□ -1.38
VRK3-220ENST00000600259 KALRNO60229 2985 aa6.45□□□□□ -1.38
VRK3-220ENST00000600259 A0A1W2PQH9 124 aa6.44□□□□□ -1.38
VRK3-220ENST00000600259 KLRC4O43908 158 aa6.44□□□□□ -1.38
VRK3-220ENST00000600259 NDUFS2O75306 463 aa6.44□□□□□ -1.38
VRK3-220ENST00000600259 CILPO75339 1184 aa6.44□□□□□ -1.38
VRK3-220ENST00000600259 ASS1P00966 412 aaKnown RBP6.44□□□□□ -1.38
VRK3-220ENST00000600259 NCAM1P13591 858 aa6.44□□□□□ -1.38
VRK3-220ENST00000600259 RARGP13631 454 aa6.44□□□□□ -1.38
VRK3-220ENST00000600259 GNSP15586 552 aa6.44□□□□□ -1.38
VRK3-220ENST00000600259 IL12RB1P42701 662 aa6.44□□□□□ -1.38
VRK3-220ENST00000600259 TPMTP51580 245 aa6.44□□□□□ -1.38
VRK3-220ENST00000600259 KIF11P52732 1056 aa6.44□□□□□ -1.38
VRK3-220ENST00000600259 ZNF132P52740 706 aa6.44□□□□□ -1.38
VRK3-220ENST00000600259 NDST1P52848 882 aa6.44□□□□□ -1.38
VRK3-220ENST00000600259 MFAP3P55082 362 aa6.44□□□□□ -1.38
VRK3-220ENST00000600259 MAP3K7CLP57077 242 aa6.44□□□□□ -1.38
VRK3-220ENST00000600259 MCCD1P59942 119 aaPredicted RBP6.44□□□□□ -1.38
VRK3-220ENST00000600259 ORC1Q13415 861 aa6.44□□□□□ -1.38
VRK3-220ENST00000600259 NCOA4Q13772 614 aa6.44□□□□□ -1.38
VRK3-220ENST00000600259 PTPRNQ16849 979 aa6.44□□□□□ -1.38
VRK3-220ENST00000600259 KNOP1Q1ED39 458 aaKnown RBP6.44□□□□□ -1.38
VRK3-220ENST00000600259 SGSM1Q2NKQ1 1148 aa6.44□□□□□ -1.38
VRK3-220ENST00000600259 HLA-BQ31612 363 aa6.44□□□□□ -1.38
VRK3-220ENST00000600259 ZACNQ401N2 412 aa6.44□□□□□ -1.38
VRK3-220ENST00000600259 ZNF667Q5HYK9 610 aa6.44□□□□□ -1.38
VRK3-220ENST00000600259 WDR45BQ5MNZ6 344 aa6.44□□□□□ -1.38
VRK3-220ENST00000600259 SDE2Q6IQ49 451 aa6.44□□□□□ -1.38
VRK3-220ENST00000600259 KIAA1324Q6UXG2 1013 aaKnown RBP6.44□□□□□ -1.38
VRK3-220ENST00000600259 UNC13DQ70J99 1090 aa6.44□□□□□ -1.38
VRK3-220ENST00000600259 SV2AQ7L0J3 742 aa6.44□□□□□ -1.38
VRK3-220ENST00000600259 UNC93AQ86WB7 457 aa6.44□□□□□ -1.38
VRK3-220ENST00000600259 TMPRSS6Q8IU80 811 aa6.44□□□□□ -1.38
VRK3-220ENST00000600259 SLC9A9Q8IVB4 645 aa6.44□□□□□ -1.38
VRK3-220ENST00000600259 RGL4Q8IZJ4 473 aa6.44□□□□□ -1.38
VRK3-220ENST00000600259 HNRNPLLQ8WVV9 542 aaKnown RBP6.44□□□□□ -1.38
VRK3-220ENST00000600259 ORAI3Q9BRQ5 295 aa6.44□□□□□ -1.38
VRK3-220ENST00000600259 MED10Q9BTT4 135 aa6.44□□□□□ -1.38
VRK3-220ENST00000600259 GPR174Q9BXC1 333 aa6.44□□□□□ -1.38
VRK3-220ENST00000600259 LRRC27Q9C0I9 530 aa6.44□□□□□ -1.38
VRK3-220ENST00000600259 CUEDC2Q9H467 287 aa6.44□□□□□ -1.38
VRK3-220ENST00000600259 FBXO44Q9H4M3 255 aa6.44□□□□□ -1.38
VRK3-220ENST00000600259 GAREM1Q9H706 876 aa6.44□□□□□ -1.38
VRK3-220ENST00000600259 PRDM16Q9HAZ2 1276 aa6.44□□□□□ -1.38
VRK3-220ENST00000600259 SCUBE2Q9NQ36 999 aa6.44□□□□□ -1.38
VRK3-220ENST00000600259 KRT82Q9NSB4 513 aa6.44□□□□□ -1.38
VRK3-220ENST00000600259 CGNQ9P2M7 1197 aaKnown RBP6.44□□□□□ -1.38
VRK3-220ENST00000600259 TFIP11Q9UBB9 837 aaKnown RBP6.44□□□□□ -1.38
VRK3-220ENST00000600259 SUSD2Q9UGT4 822 aa6.44□□□□□ -1.38
VRK3-220ENST00000600259 DNMT3LQ9UJW3 386 aa6.44□□□□□ -1.38
VRK3-220ENST00000600259 APOBEC2Q9Y235 224 aaKnown RBP6.44□□□□□ -1.38
VRK3-220ENST00000600259 BTBD3Q9Y2F9 522 aa6.44□□□□□ -1.38
VRK3-220ENST00000600259 FNDC3AQ9Y2H6 1198 aaKnown RBP6.44□□□□□ -1.38
VRK3-220ENST00000600259 RAXQ9Y2V3 346 aa6.44□□□□□ -1.38
VRK3-220ENST00000600259 PCDHB9Q9Y5E1 797 aa6.44□□□□□ -1.38
VRK3-220ENST00000600259 PCDHGB2Q9Y5G2 931 aa6.44□□□□□ -1.38
VRK3-220ENST00000600259 ATP8B3O60423 1300 aa6.44□□□□□ -1.38
VRK3-220ENST00000600259 ASH1LQ9NR48 2969 aaKnown RBP6.44□□□□□ -1.38
VRK3-220ENST00000600259 A0A1B0GVT2 93 aa6.43□□□□□ -1.38
VRK3-220ENST00000600259 PVALEFA0A1B0GWK0 134 aa6.43□□□□□ -1.38
VRK3-220ENST00000600259 TRABD2BA6NFA1 517 aa6.43□□□□□ -1.38
VRK3-220ENST00000600259 C10orf142B7Z368 130 aa6.43□□□□□ -1.38
VRK3-220ENST00000600259 NPC1O15118 1278 aa6.43□□□□□ -1.38
VRK3-220ENST00000600259 BCAT2O15382 392 aaPredicted RBP6.43□□□□□ -1.38
VRK3-220ENST00000600259 ZBTB24O43167 697 aaPredicted RBP6.43□□□□□ -1.38
VRK3-220ENST00000600259 CYP26A1O43174 497 aa6.43□□□□□ -1.38
VRK3-220ENST00000600259 EXOC3O60645 756 aa6.43□□□□□ -1.38
VRK3-220ENST00000600259 PHACTR2O75167 634 aa6.43□□□□□ -1.38
VRK3-220ENST00000600259 PPP6R2O75170 966 aa6.43□□□□□ -1.38
VRK3-220ENST00000600259 RPN1P04843 607 aaKnown RBP6.43□□□□□ -1.38
VRK3-220ENST00000600259 PDCP20941 246 aa6.43□□□□□ -1.38
VRK3-220ENST00000600259 PRKCHP24723 683 aa6.43□□□□□ -1.38
VRK3-220ENST00000600259 ASPAP45381 313 aa6.43□□□□□ -1.38
VRK3-220ENST00000600259 AP3M2P53677 418 aa6.43□□□□□ -1.38
VRK3-220ENST00000600259 ASIC1P78348 528 aa6.43□□□□□ -1.38
VRK3-220ENST00000600259 AMPD3Q01432 767 aa6.43□□□□□ -1.38
VRK3-220ENST00000600259 INCA1Q0VD86 236 aa6.43□□□□□ -1.38
VRK3-220ENST00000600259 STK4Q13043 487 aa6.43□□□□□ -1.38
VRK3-220ENST00000600259 CUL4BQ13620 913 aa6.43□□□□□ -1.38
VRK3-220ENST00000600259 ZNF234Q14588 700 aa6.43□□□□□ -1.38
VRK3-220ENST00000600259 ZNF699Q32M78 642 aa6.43□□□□□ -1.38
VRK3-220ENST00000600259 KCNT1Q5JUK3 1230 aa6.43□□□□□ -1.38
VRK3-220ENST00000600259 DCAF12L1Q5VU92 463 aa6.43□□□□□ -1.38
VRK3-220ENST00000600259 SPOPLQ6IQ16 392 aa6.43□□□□□ -1.38
VRK3-220ENST00000600259 SCARA5Q6ZMJ2 495 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms