RNA–Protein interactions for RNA: ENST00000600231.5

GRAMD1A-212, Transcript of GRAM domain containing 1A, humanhuman

TSL 2

Gene GRAMD1A, Length 2,534 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-212ENST00000600231 CA4P22748 312 aa22.42■■□□□ 1.18
GRAMD1A-212ENST00000600231 MSH2P43246 934 aa22.42■■□□□ 1.18
GRAMD1A-212ENST00000600231 NCBP2-AS2Q69YL0 99 aa22.42■■□□□ 1.18
GRAMD1A-212ENST00000600231 CDKL3Q8IVW4 592 aaPredicted RBP22.42■■□□□ 1.18
GRAMD1A-212ENST00000600231 DCAKDQ8WVC6 231 aa22.42■■□□□ 1.18
GRAMD1A-212ENST00000600231 KDM4CQ9H3R0 1056 aa22.42■■□□□ 1.18
GRAMD1A-212ENST00000600231 AGO3Q9H9G7 860 aaKnown RBP22.42■■□□□ 1.18
GRAMD1A-212ENST00000600231 DTLQ9NZJ0 730 aa22.42■■□□□ 1.18
GRAMD1A-212ENST00000600231 COX16Q9P0S2 106 aa22.42■■□□□ 1.18
GRAMD1A-212ENST00000600231 FZD10Q9ULW2 581 aa22.42■■□□□ 1.18
GRAMD1A-212ENST00000600231 GABRQQ9UN88 632 aa22.42■■□□□ 1.18
GRAMD1A-212ENST00000600231 USP3Q9Y6I4 520 aa22.42■■□□□ 1.18
GRAMD1A-212ENST00000600231 NR2C2P49116 596 aa22.42■■□□□ 1.18
GRAMD1A-212ENST00000600231 SLC18A1P54219 525 aa22.42■■□□□ 1.18
GRAMD1A-212ENST00000600231 XRCC4Q13426 336 aa22.42■■□□□ 1.18
GRAMD1A-212ENST00000600231 SYPL2Q5VXT5 272 aa22.42■■□□□ 1.18
GRAMD1A-212ENST00000600231 KCTD13Q8WZ19 329 aa22.42■■□□□ 1.18
GRAMD1A-212ENST00000600231 CYTH2Q99418 400 aa22.42■■□□□ 1.18
GRAMD1A-212ENST00000600231 KRT82Q9NSB4 513 aa22.42■■□□□ 1.18
GRAMD1A-212ENST00000600231 USP15Q9Y4E8 981 aaPredicted RBP22.42■■□□□ 1.18
GRAMD1A-212ENST00000600231 NR2E3Q9Y5X4 410 aa22.42■■□□□ 1.18
GRAMD1A-212ENST00000600231 ARL5CA6NH57 179 aa22.41■■□□□ 1.18
GRAMD1A-212ENST00000600231 DAB1O75553 588 aa22.41■■□□□ 1.18
GRAMD1A-212ENST00000600231 METTL18O95568 372 aa22.41■■□□□ 1.18
GRAMD1A-212ENST00000600231 FAM163BP0C2L3 166 aa22.41■■□□□ 1.18
GRAMD1A-212ENST00000600231 YWHAGP61981 247 aaKnown RBP eCLIP22.41■■□□□ 1.18
GRAMD1A-212ENST00000600231 LACTB2Q53H82 288 aaPredicted RBP22.41■■□□□ 1.18
GRAMD1A-212ENST00000600231 AGMOQ6ZNB7 445 aa22.41■■□□□ 1.18
GRAMD1A-212ENST00000600231 HFE2Q6ZVN8 426 aa22.41■■□□□ 1.18
GRAMD1A-212ENST00000600231 SERINC5Q86VE9 423 aa22.41■■□□□ 1.18
GRAMD1A-212ENST00000600231 CAND1Q86VP6 1230 aaKnown RBP22.41■■□□□ 1.18
GRAMD1A-212ENST00000600231 MZB1Q8WU39 189 aa22.41■■□□□ 1.18
GRAMD1A-212ENST00000600231 NT5C3BQ969T7 300 aa22.41■■□□□ 1.18
GRAMD1A-212ENST00000600231 ZIC5Q96T25 663 aa22.41■■□□□ 1.18
GRAMD1A-212ENST00000600231 PAAF1Q9BRP4 392 aa22.41■■□□□ 1.18
GRAMD1A-212ENST00000600231 MYO18AQ92614 2054 aaKnown RBP22.41■■□□□ 1.18
GRAMD1A-212ENST00000600231 H0YHG0 523 aa22.41■■□□□ 1.18
GRAMD1A-212ENST00000600231 NOS2P35228 1153 aa22.41■■□□□ 1.18
GRAMD1A-212ENST00000600231 ARL4AP40617 200 aa22.41■■□□□ 1.18
GRAMD1A-212ENST00000600231 TKTL1P51854 596 aa22.41■■□□□ 1.18
GRAMD1A-212ENST00000600231 SLC1A5Q15758 541 aa22.41■■□□□ 1.18
GRAMD1A-212ENST00000600231 KBTBD12Q3ZCT8 623 aa22.41■■□□□ 1.18
GRAMD1A-212ENST00000600231 SIX6OS1Q8N1H7 587 aa22.41■■□□□ 1.18
GRAMD1A-212ENST00000600231 NPY6RQ99463 290 aa22.41■■□□□ 1.18
GRAMD1A-212ENST00000600231 GRID1Q9ULK0 1009 aa22.41■■□□□ 1.18
GRAMD1A-212ENST00000600231 MYBPHLA2RUH7 354 aa22.4■■□□□ 1.18
GRAMD1A-212ENST00000600231 FAM200BP0CF97 657 aa22.4■■□□□ 1.18
GRAMD1A-212ENST00000600231 MAGEA6P43360 314 aa22.4■■□□□ 1.18
GRAMD1A-212ENST00000600231 SCNN1GP51170 649 aa22.4■■□□□ 1.18
GRAMD1A-212ENST00000600231 TRIM32Q13049 653 aa22.4■■□□□ 1.18
GRAMD1A-212ENST00000600231 SPARCL1Q14515 664 aa22.4■■□□□ 1.18
GRAMD1A-212ENST00000600231 ACTR5Q9H9F9 607 aaPredicted RBP22.4■■□□□ 1.18
GRAMD1A-212ENST00000600231 CHST12Q9NRB3 414 aa22.4■■□□□ 1.18
GRAMD1A-212ENST00000600231 CASTOR2A6NHX0 329 aa22.4■■□□□ 1.18
GRAMD1A-212ENST00000600231 FAM155AB1AL88 458 aaPredicted RBP22.4■■□□□ 1.18
GRAMD1A-212ENST00000600231 M0QYT0 321 aa22.4■■□□□ 1.18
GRAMD1A-212ENST00000600231 NRP1O14786 923 aa22.4■■□□□ 1.18
GRAMD1A-212ENST00000600231 GCATO75600 419 aa22.4■■□□□ 1.18
GRAMD1A-212ENST00000600231 MFSD14CQ5VZR4 134 aa22.4■■□□□ 1.18
GRAMD1A-212ENST00000600231 FBXW10Q5XX13 1052 aa22.4■■□□□ 1.18
GRAMD1A-212ENST00000600231 TRPM8Q7Z2W7 1104 aa22.4■■□□□ 1.18
GRAMD1A-212ENST00000600231 HACE1Q8IYU2 909 aa22.4■■□□□ 1.18
GRAMD1A-212ENST00000600231 PCED1BQ96HM7 432 aa22.4■■□□□ 1.18
GRAMD1A-212ENST00000600231 KCNK16Q96T55 309 aa22.4■■□□□ 1.18
GRAMD1A-212ENST00000600231 SYT15Q9BQS2 421 aa22.4■■□□□ 1.18
GRAMD1A-212ENST00000600231 MYCNP04198 464 aaPredicted RBP22.39■■□□□ 1.18
GRAMD1A-212ENST00000600231 SCTRP47872 440 aa22.39■■□□□ 1.18
GRAMD1A-212ENST00000600231 NME3Q13232 169 aa22.39■■□□□ 1.18
GRAMD1A-212ENST00000600231 TTC31Q49AM3 519 aaPredicted RBP22.39■■□□□ 1.18
GRAMD1A-212ENST00000600231 CGB2Q6NT52 195 aa22.39■■□□□ 1.18
GRAMD1A-212ENST00000600231 DSTYKQ6XUX3 929 aa22.39■■□□□ 1.18
GRAMD1A-212ENST00000600231 FAM47EQ6ZV65 393 aa22.39■■□□□ 1.18
GRAMD1A-212ENST00000600231 BNIPLQ7Z465 357 aa22.39■■□□□ 1.18
GRAMD1A-212ENST00000600231 VPS52Q8N1B4 723 aa22.39■■□□□ 1.18
GRAMD1A-212ENST00000600231 NETO2Q8NC67 525 aa22.39■■□□□ 1.18
GRAMD1A-212ENST00000600231 CFAP36Q96G28 342 aa22.39■■□□□ 1.18
GRAMD1A-212ENST00000600231 QKIQ96PU8 341 aaKnown RBP eCLIP22.39■■□□□ 1.18
GRAMD1A-212ENST00000600231 FRMD8Q9BZ67 464 aaPredicted RBP22.39■■□□□ 1.18
GRAMD1A-212ENST00000600231 SPC25Q9HBM1 224 aa22.39■■□□□ 1.18
GRAMD1A-212ENST00000600231 TMEM30AQ9NV96 361 aa22.39■■□□□ 1.18
GRAMD1A-212ENST00000600231 LHX1P48742 406 aa22.39■■□□□ 1.17
GRAMD1A-212ENST00000600231 FLT3LGP49771 235 aa22.39■■□□□ 1.17
GRAMD1A-212ENST00000600231 CBLBQ13191 982 aa22.39■■□□□ 1.17
GRAMD1A-212ENST00000600231 SPATA21Q7Z572 469 aa22.39■■□□□ 1.17
GRAMD1A-212ENST00000600231 SPOCK2Q92563 424 aa22.39■■□□□ 1.17
GRAMD1A-212ENST00000600231 KLF6Q99612 283 aaPredicted RBP22.39■■□□□ 1.17
GRAMD1A-212ENST00000600231 SMOQ99835 787 aa22.39■■□□□ 1.17
GRAMD1A-212ENST00000600231 ARHGEF4Q9NR80 690 aa22.39■■□□□ 1.17
GRAMD1A-212ENST00000600231 ABCF3Q9NUQ8 709 aa22.39■■□□□ 1.17
GRAMD1A-212ENST00000600231 GGT7Q9UJ14 662 aa22.39■■□□□ 1.17
GRAMD1A-212ENST00000600231 ZNF638Q14966 1978 aaKnown RBP22.39■■□□□ 1.17
GRAMD1A-212ENST00000600231 GOLGA8RI6L899 631 aa22.38■■□□□ 1.17
GRAMD1A-212ENST00000600231 CAPN15O75808 1086 aa22.38■■□□□ 1.17
GRAMD1A-212ENST00000600231 SUN1O94901 812 aa22.38■■□□□ 1.17
GRAMD1A-212ENST00000600231 FYNP06241 537 aa22.38■■□□□ 1.17
GRAMD1A-212ENST00000600231 IBSPP21815 317 aaPredicted RBP22.38■■□□□ 1.17
GRAMD1A-212ENST00000600231 MGAT3Q09327 533 aa22.38■■□□□ 1.17
GRAMD1A-212ENST00000600231 HEATR6Q6AI08 1181 aaKnown RBP22.38■■□□□ 1.17
GRAMD1A-212ENST00000600231 PRPF39Q86UA1 669 aaKnown RBP22.38■■□□□ 1.17
GRAMD1A-212ENST00000600231 RNF169Q8NCN4 708 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms