RNA–Protein interactions for RNA: ENST00000599575.5

SHKBP1-219, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 810 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-219ENST00000599575 MSANTD3Q96H12 275 aa17.28■□□□□ 0.36
SHKBP1-219ENST00000599575 FAM83CQ9BQN1 747 aa17.28■□□□□ 0.36
SHKBP1-219ENST00000599575 DDX23Q9BUQ8 820 aaKnown RBP17.28■□□□□ 0.36
SHKBP1-219ENST00000599575 SMG9Q9H0W8 520 aaKnown RBP17.28■□□□□ 0.36
SHKBP1-219ENST00000599575 BRD9Q9H8M2 597 aa17.28■□□□□ 0.36
SHKBP1-219ENST00000599575 CD320Q9NPF0 282 aa17.28■□□□□ 0.36
SHKBP1-219ENST00000599575 SMPD4Q9NXE4 827 aa17.28■□□□□ 0.36
SHKBP1-219ENST00000599575 CFAP97Q9P2B7 532 aa17.28■□□□□ 0.36
SHKBP1-219ENST00000599575 RASAL2Q9UJF2 1139 aa17.28■□□□□ 0.36
SHKBP1-219ENST00000599575 NAALADL1Q9UQQ1 740 aa17.28■□□□□ 0.36
SHKBP1-219ENST00000599575 NUP210Q8TEM1 1887 aaPredicted RBP17.27■□□□□ 0.36
SHKBP1-219ENST00000599575 DCXO43602 365 aa17.27■□□□□ 0.36
SHKBP1-219ENST00000599575 IGLV3-25P01717 112 aa17.27■□□□□ 0.36
SHKBP1-219ENST00000599575 PLEKP08567 350 aaPredicted RBP17.27■□□□□ 0.36
SHKBP1-219ENST00000599575 ZXDBP98169 803 aa17.27■□□□□ 0.36
SHKBP1-219ENST00000599575 AMPD2Q01433 879 aa17.27■□□□□ 0.36
SHKBP1-219ENST00000599575 TAF5Q15542 800 aa17.27■□□□□ 0.36
SHKBP1-219ENST00000599575 SLC25A52Q3SY17 297 aa17.27■□□□□ 0.36
SHKBP1-219ENST00000599575 CCDC122Q5T0U0 273 aa17.27■□□□□ 0.36
SHKBP1-219ENST00000599575 PLEKHA7Q6IQ23 1121 aa17.27■□□□□ 0.36
SHKBP1-219ENST00000599575 DNAJC24Q6P3W2 148 aa17.27■□□□□ 0.36
SHKBP1-219ENST00000599575 DEFB106AQ8N104 65 aa17.27■□□□□ 0.36
SHKBP1-219ENST00000599575 ATP2A3Q93084 1043 aa17.27■□□□□ 0.36
SHKBP1-219ENST00000599575 PIWIL1Q96J94 861 aaKnown RBP17.27■□□□□ 0.36
SHKBP1-219ENST00000599575 NECAB3Q96P71 396 aaPredicted RBP17.27■□□□□ 0.36
SHKBP1-219ENST00000599575 LRRC3BQ96PB8 259 aa17.27■□□□□ 0.36
SHKBP1-219ENST00000599575 RPP25Q9BUL9 199 aaKnown RBP17.27■□□□□ 0.36
SHKBP1-219ENST00000599575 SELENOOQ9BVL4 669 aa17.27■□□□□ 0.36
SHKBP1-219ENST00000599575 PLA2G2FQ9BZM2 168 aa17.27■□□□□ 0.36
SHKBP1-219ENST00000599575 LUC7LQ9NQ29 371 aaKnown RBP17.27■□□□□ 0.36
SHKBP1-219ENST00000599575 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.27■□□□□ 0.36
SHKBP1-219ENST00000599575 TAS2R14Q9NYV8 317 aa17.27■□□□□ 0.36
SHKBP1-219ENST00000599575 WNT16Q9UBV4 365 aa17.27■□□□□ 0.36
SHKBP1-219ENST00000599575 NENFQ9UMX5 172 aa17.27■□□□□ 0.36
SHKBP1-219ENST00000599575 OBSL1O75147 1896 aa17.27■□□□□ 0.35
SHKBP1-219ENST00000599575 DENND4CQ5VZ89 1909 aa17.26■□□□□ 0.35
SHKBP1-219ENST00000599575 TCRBV5S1A1TA0A578 114 aa17.26■□□□□ 0.35
SHKBP1-219ENST00000599575 SLC12A8A0AV02 714 aa17.26■□□□□ 0.35
SHKBP1-219ENST00000599575 GOLGA8SH3BPF8 625 aa17.26■□□□□ 0.35
SHKBP1-219ENST00000599575 STC2O76061 302 aa17.26■□□□□ 0.35
SHKBP1-219ENST00000599575 NFATC1O95644 943 aa17.26■□□□□ 0.35
SHKBP1-219ENST00000599575 TRUB2O95900 331 aaKnown RBP17.26■□□□□ 0.35
SHKBP1-219ENST00000599575 IGLV3-27P01718 113 aa17.26■□□□□ 0.35
SHKBP1-219ENST00000599575 GDI1P31150 447 aa17.26■□□□□ 0.35
SHKBP1-219ENST00000599575 CYLC1P35663 651 aaPredicted RBP17.26■□□□□ 0.35
SHKBP1-219ENST00000599575 PTPN9P43378 593 aa17.26■□□□□ 0.35
SHKBP1-219ENST00000599575 IFNAR2P48551 515 aa17.26■□□□□ 0.35
SHKBP1-219ENST00000599575 NR1H3Q13133 447 aa17.26■□□□□ 0.35
SHKBP1-219ENST00000599575 EIF4EBP2Q13542 120 aaPredicted RBP17.26■□□□□ 0.35
SHKBP1-219ENST00000599575 GSE1Q14687 1217 aa17.26■□□□□ 0.35
SHKBP1-219ENST00000599575 SYPL2Q5VXT5 272 aa17.26■□□□□ 0.35
SHKBP1-219ENST00000599575 NPY6RQ99463 290 aa17.26■□□□□ 0.35
SHKBP1-219ENST00000599575 CHP1Q99653 195 aa17.26■□□□□ 0.35
SHKBP1-219ENST00000599575 GKN1Q9NS71 199 aa17.26■□□□□ 0.35
SHKBP1-219ENST00000599575 DUS2Q9NX74 493 aaKnown RBP17.26■□□□□ 0.35
SHKBP1-219ENST00000599575 LCMT1Q9UIC8 334 aa17.26■□□□□ 0.35
SHKBP1-219ENST00000599575 NUDT5Q9UKK9 219 aa17.26■□□□□ 0.35
SHKBP1-219ENST00000599575 INTUQ9ULD6 942 aa17.26■□□□□ 0.35
SHKBP1-219ENST00000599575 TMCO5BA8MYB1 307 aa17.25■□□□□ 0.35
SHKBP1-219ENST00000599575 ARNTLO00327 626 aa17.25■□□□□ 0.35
SHKBP1-219ENST00000599575 IRAK2O43187 625 aa17.25■□□□□ 0.35
SHKBP1-219ENST00000599575 GREM1O60565 184 aa17.25■□□□□ 0.35
SHKBP1-219ENST00000599575 IPO7O95373 1038 aaKnown RBP17.25■□□□□ 0.35
SHKBP1-219ENST00000599575 LCA5LO95447 670 aa17.25■□□□□ 0.35
SHKBP1-219ENST00000599575 RRM1P23921 792 aa17.25■□□□□ 0.35
SHKBP1-219ENST00000599575 SDC4P31431 198 aa17.25■□□□□ 0.35
SHKBP1-219ENST00000599575 CCR1P32246 355 aa17.25■□□□□ 0.35
SHKBP1-219ENST00000599575 CHKAP35790 457 aa17.25■□□□□ 0.35
SHKBP1-219ENST00000599575 TBX4P57082 545 aa17.25■□□□□ 0.35
SHKBP1-219ENST00000599575 GPC5P78333 572 aa17.25■□□□□ 0.35
SHKBP1-219ENST00000599575 PPP2R5DQ14738 602 aa17.25■□□□□ 0.35
SHKBP1-219ENST00000599575 C2CD6Q53TS8 623 aa17.25■□□□□ 0.35
SHKBP1-219ENST00000599575 PPP1R15BQ5SWA1 713 aa17.25■□□□□ 0.35
SHKBP1-219ENST00000599575 DCUN1D2Q6PH85 259 aa17.25■□□□□ 0.35
SHKBP1-219ENST00000599575 Q6ZNB5 142 aa17.25■□□□□ 0.35
SHKBP1-219ENST00000599575 SND1Q7KZF4 910 aaKnown RBP eCLIP17.25■□□□□ 0.35
SHKBP1-219ENST00000599575 CSGALNACT1Q8TDX6 532 aa17.25■□□□□ 0.35
SHKBP1-219ENST00000599575 FNIP1Q8TF40 1166 aa17.25■□□□□ 0.35
SHKBP1-219ENST00000599575 EDAQ92838 391 aa17.25■□□□□ 0.35
SHKBP1-219ENST00000599575 EXOC4Q96A65 974 aa17.25■□□□□ 0.35
SHKBP1-219ENST00000599575 SLC39A13Q96H72 371 aa17.25■□□□□ 0.35
SHKBP1-219ENST00000599575 NCAPGQ9BPX3 1015 aa17.25■□□□□ 0.35
SHKBP1-219ENST00000599575 METTL5Q9NRN9 209 aaKnown RBP17.25■□□□□ 0.35
SHKBP1-219ENST00000599575 SFMBT1Q9UHJ3 866 aa17.25■□□□□ 0.35
SHKBP1-219ENST00000599575 SLC12A6Q9UHW9 1150 aa17.25■□□□□ 0.35
SHKBP1-219ENST00000599575 MUTYHQ9UIF7 546 aa17.25■□□□□ 0.35
SHKBP1-219ENST00000599575 STOML2Q9UJZ1 356 aa17.25■□□□□ 0.35
SHKBP1-219ENST00000599575 ANAPC1Q9H1A4 1944 aa17.25■□□□□ 0.35
SHKBP1-219ENST00000599575 C2CD4BA6NLJ0 364 aa17.24■□□□□ 0.35
SHKBP1-219ENST00000599575 MDM4O15151 490 aa17.24■□□□□ 0.35
SHKBP1-219ENST00000599575 GRAP2O75791 330 aa17.24■□□□□ 0.35
SHKBP1-219ENST00000599575 ENDOD1O94919 500 aa17.24■□□□□ 0.35
SHKBP1-219ENST00000599575 APOEP02649 317 aa17.24■□□□□ 0.35
SHKBP1-219ENST00000599575 H2AFZP0C0S5 128 aa17.24■□□□□ 0.35
SHKBP1-219ENST00000599575 PDGFRAP16234 1089 aa17.24■□□□□ 0.35
SHKBP1-219ENST00000599575 FLT3P36888 993 aa17.24■□□□□ 0.35
SHKBP1-219ENST00000599575 SLC11A2P49281 568 aa17.24■□□□□ 0.35
SHKBP1-219ENST00000599575 ZNF143P52747 638 aaPredicted RBP17.24■□□□□ 0.35
SHKBP1-219ENST00000599575 RNASE9P60153 205 aaKnown RBP17.24■□□□□ 0.35
SHKBP1-219ENST00000599575 ZXDAP98168 799 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms