RNA–Protein interactions for RNA: ENST00000599335.5

SUPT5H-216, Transcript of SPT5 homolog, DSIF elongation factor subunit, human

TSL 2

Gene SUPT5H, Length 3,796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUPT5H-216	ENST00000599335	KLHL11	Q9NVR0	708 aa		11.73	□□□□□ -0.53
SUPT5H-216	ENST00000599335	NOVA2	Q9UNW9	492 aa	Known RBP	11.73	□□□□□ -0.53
SUPT5H-216	ENST00000599335		A0A0C4DFX4	3053 aa		11.73	□□□□□ -0.53
SUPT5H-216	ENST00000599335	KIAA1217	Q5T5P2	1943 aa		11.73	□□□□□ -0.53
SUPT5H-216	ENST00000599335	PRKCB	P05771	671 aa		11.73	□□□□□ -0.53
SUPT5H-216	ENST00000599335	GALK1	P51570	392 aa		11.73	□□□□□ -0.53
SUPT5H-216	ENST00000599335	CLEC16A	Q2KHT3	1053 aa		11.73	□□□□□ -0.53
SUPT5H-216	ENST00000599335	ZACN	Q401N2	412 aa		11.73	□□□□□ -0.53
SUPT5H-216	ENST00000599335	GDF6	Q6KF10	455 aa	Predicted RBP	11.73	□□□□□ -0.53
SUPT5H-216	ENST00000599335	C11orf63	Q6NUN7	778 aa		11.73	□□□□□ -0.53
SUPT5H-216	ENST00000599335	IQCK	Q8N0W5	287 aa		11.73	□□□□□ -0.53
SUPT5H-216	ENST00000599335	FBXL18	Q96ME1	805 aa		11.73	□□□□□ -0.53
SUPT5H-216	ENST00000599335	SELENOS	Q9BQE4	189 aa		11.73	□□□□□ -0.53
SUPT5H-216	ENST00000599335	MRPL4	Q9BYD3	311 aa	Known RBP	11.73	□□□□□ -0.53
SUPT5H-216	ENST00000599335	DHX33	Q9H6R0	707 aa	Known RBP	11.73	□□□□□ -0.53
SUPT5H-216	ENST00000599335	HESX1	Q9UBX0	185 aa		11.73	□□□□□ -0.53
SUPT5H-216	ENST00000599335	COQ4	Q9Y3A0	265 aa		11.73	□□□□□ -0.53
SUPT5H-216	ENST00000599335	PTPRF	P10586	1907 aa		11.73	□□□□□ -0.53
SUPT5H-216	ENST00000599335	ATXN2	Q99700	1313 aa	Known RBP	11.73	□□□□□ -0.53
SUPT5H-216	ENST00000599335	NDC80	O14777	642 aa		11.72	□□□□□ -0.53
SUPT5H-216	ENST00000599335	MAP3K13	O43283	966 aa		11.72	□□□□□ -0.53
SUPT5H-216	ENST00000599335	PHF2	O75151	1096 aa		11.72	□□□□□ -0.53
SUPT5H-216	ENST00000599335	WEE2	P0C1S8	567 aa		11.72	□□□□□ -0.53
SUPT5H-216	ENST00000599335	RFC1	P35251	1148 aa	Predicted RBP	11.72	□□□□□ -0.53
SUPT5H-216	ENST00000599335	CD97	P48960	835 aa		11.72	□□□□□ -0.53
SUPT5H-216	ENST00000599335	POLD2	P49005	469 aa		11.72	□□□□□ -0.53
SUPT5H-216	ENST00000599335	GCNT1	Q02742	428 aa		11.72	□□□□□ -0.53
SUPT5H-216	ENST00000599335	ZNF568	Q3ZCX4	644 aa		11.72	□□□□□ -0.53
SUPT5H-216	ENST00000599335	PABPC1L	Q4VXU2	614 aa	Known RBP	11.72	□□□□□ -0.53
SUPT5H-216	ENST00000599335	GSTA5	Q7RTV2	222 aa		11.72	□□□□□ -0.53
SUPT5H-216	ENST00000599335	NSMCE3	Q96MG7	304 aa		11.72	□□□□□ -0.53
SUPT5H-216	ENST00000599335	EMC3	Q9P0I2	261 aa		11.72	□□□□□ -0.53
SUPT5H-216	ENST00000599335	CDY2A	Q9Y6F7	541 aa		11.72	□□□□□ -0.53
SUPT5H-216	ENST00000599335	UMODL1	Q5DID0	1318 aa		11.72	□□□□□ -0.53
SUPT5H-216	ENST00000599335	DNAJB2	P25686	324 aa		11.72	□□□□□ -0.53
SUPT5H-216	ENST00000599335	IFNA8	P32881	189 aa		11.72	□□□□□ -0.53
SUPT5H-216	ENST00000599335	SKIV2L2	P42285	1042 aa	Known RBP	11.72	□□□□□ -0.53
SUPT5H-216	ENST00000599335	SLCO1A2	P46721	670 aa		11.72	□□□□□ -0.53
SUPT5H-216	ENST00000599335	BCAR1	P56945	870 aa		11.72	□□□□□ -0.53
SUPT5H-216	ENST00000599335	IFRD2	Q12894	506 aa	Predicted RBP	11.72	□□□□□ -0.53
SUPT5H-216	ENST00000599335	IRGC	Q6NXR0	463 aa		11.72	□□□□□ -0.53
SUPT5H-216	ENST00000599335	SLC13A5	Q86YT5	568 aa	Predicted RBP	11.72	□□□□□ -0.53
SUPT5H-216	ENST00000599335	PPTC7	Q8NI37	304 aa		11.72	□□□□□ -0.53
SUPT5H-216	ENST00000599335	OLIG1	Q8TAK6	271 aa		11.72	□□□□□ -0.53
SUPT5H-216	ENST00000599335	FBXO25	Q8TCJ0	367 aa		11.72	□□□□□ -0.53
SUPT5H-216	ENST00000599335	ATG4A	Q8WYN0	398 aa		11.72	□□□□□ -0.53
SUPT5H-216	ENST00000599335	ATP6V1G3	Q96LB4	118 aa		11.72	□□□□□ -0.53
SUPT5H-216	ENST00000599335	YME1L1	Q96TA2	773 aa		11.72	□□□□□ -0.53
SUPT5H-216	ENST00000599335	POLI	Q9UNA4	740 aa		11.72	□□□□□ -0.53
SUPT5H-216	ENST00000599335	PTPRJ	Q12913	1337 aa		11.72	□□□□□ -0.53
SUPT5H-216	ENST00000599335	CHRNA3	P32297	505 aa		11.72	□□□□□ -0.53
SUPT5H-216	ENST00000599335	HSPA9	P38646	679 aa	Known RBP	11.72	□□□□□ -0.53
SUPT5H-216	ENST00000599335	SERPINB8	P50452	374 aa		11.72	□□□□□ -0.53
SUPT5H-216	ENST00000599335	DSTN	P60981	165 aa		11.72	□□□□□ -0.53
SUPT5H-216	ENST00000599335	PLOD1	Q02809	727 aa	Predicted RBP	11.72	□□□□□ -0.53
SUPT5H-216	ENST00000599335	DENND2C	Q68D51	928 aa		11.72	□□□□□ -0.53
SUPT5H-216	ENST00000599335	SCARA3	Q6AZY7	606 aa		11.72	□□□□□ -0.53
SUPT5H-216	ENST00000599335	KIAA1841	Q6NSI8	718 aa		11.72	□□□□□ -0.53
SUPT5H-216	ENST00000599335	CCDC62	Q6P9F0	684 aa		11.72	□□□□□ -0.53
SUPT5H-216	ENST00000599335	CCBE1	Q6UXH8	406 aa	Predicted RBP	11.72	□□□□□ -0.53
SUPT5H-216	ENST00000599335	ZNF75CP	Q92670	426 aa	Predicted RBP	11.72	□□□□□ -0.53
SUPT5H-216	ENST00000599335	TTC7A	Q9ULT0	858 aa	Predicted RBP	11.72	□□□□□ -0.53
SUPT5H-216	ENST00000599335	LZTS1	Q9Y250	596 aa		11.72	□□□□□ -0.53
SUPT5H-216	ENST00000599335	KCNJ13	O60928	360 aa		11.71	□□□□□ -0.53
SUPT5H-216	ENST00000599335	GUCY1B2	O75343	617 aa		11.71	□□□□□ -0.53
SUPT5H-216	ENST00000599335	PAH	P00439	452 aa		11.71	□□□□□ -0.53
SUPT5H-216	ENST00000599335	LMNA	P02545	664 aa	Known RBP	11.71	□□□□□ -0.53
SUPT5H-216	ENST00000599335	CFH	P08603	1231 aa		11.71	□□□□□ -0.53
SUPT5H-216	ENST00000599335	ENO2	P09104	434 aa	Predicted RBP	11.71	□□□□□ -0.53
SUPT5H-216	ENST00000599335	ATF7	P17544	494 aa	Predicted RBP	11.71	□□□□□ -0.53
SUPT5H-216	ENST00000599335	SP100	P23497	879 aa	Predicted RBP	11.71	□□□□□ -0.53
SUPT5H-216	ENST00000599335	AKAP5	P24588	427 aa		11.71	□□□□□ -0.53
SUPT5H-216	ENST00000599335	KCNJ2	P63252	427 aa		11.71	□□□□□ -0.53
SUPT5H-216	ENST00000599335	LRRC8B	Q6P9F7	803 aa		11.71	□□□□□ -0.53
SUPT5H-216	ENST00000599335	EXOC3L1	Q86VI1	746 aa		11.71	□□□□□ -0.53
SUPT5H-216	ENST00000599335	MCOLN2	Q8IZK6	566 aa		11.71	□□□□□ -0.53
SUPT5H-216	ENST00000599335	ARFGAP2	Q8N6H7	521 aa		11.71	□□□□□ -0.53
SUPT5H-216	ENST00000599335	PRELID2	Q8N945	189 aa		11.71	□□□□□ -0.53
SUPT5H-216	ENST00000599335	DBF4B	Q8NFT6	615 aa		11.71	□□□□□ -0.53
SUPT5H-216	ENST00000599335	RNF25	Q96BH1	459 aa	Predicted RBP	11.71	□□□□□ -0.53
SUPT5H-216	ENST00000599335	NMD3	Q96D46	503 aa	Known RBP	11.71	□□□□□ -0.53
SUPT5H-216	ENST00000599335	SCYL1	Q96KG9	808 aa		11.71	□□□□□ -0.53
SUPT5H-216	ENST00000599335	PDLIM7	Q9NR12	457 aa		11.71	□□□□□ -0.53
SUPT5H-216	ENST00000599335	ABLIM1	O14639	778 aa		11.71	□□□□□ -0.53
SUPT5H-216	ENST00000599335	HOXC6	P09630	235 aa		11.71	□□□□□ -0.53
SUPT5H-216	ENST00000599335	PHKA2	P46019	1235 aa		11.71	□□□□□ -0.53
SUPT5H-216	ENST00000599335	IFNAR2	P48551	515 aa		11.71	□□□□□ -0.53
SUPT5H-216	ENST00000599335	TUB	P50607	506 aa		11.71	□□□□□ -0.53
SUPT5H-216	ENST00000599335	HSD17B7	P56937	341 aa		11.71	□□□□□ -0.53
SUPT5H-216	ENST00000599335	PURA	Q00577	322 aa	Known RBP	11.71	□□□□□ -0.53
SUPT5H-216	ENST00000599335	LAMTOR4	Q0VGL1	99 aa		11.71	□□□□□ -0.53
SUPT5H-216	ENST00000599335	BFSP2	Q13515	415 aa		11.71	□□□□□ -0.53
SUPT5H-216	ENST00000599335	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	11.71	□□□□□ -0.53
SUPT5H-216	ENST00000599335	SLC22A8	Q8TCC7	542 aa		11.71	□□□□□ -0.53
SUPT5H-216	ENST00000599335	BAD	Q92934	168 aa		11.71	□□□□□ -0.53
SUPT5H-216	ENST00000599335	LPP	Q93052	612 aa		11.71	□□□□□ -0.53
SUPT5H-216	ENST00000599335	HAPLN2	Q9GZV7	340 aa		11.71	□□□□□ -0.53
SUPT5H-216	ENST00000599335	APOBEC3G	Q9HC16	384 aa	Known RBP	11.71	□□□□□ -0.53
SUPT5H-216	ENST00000599335	GOLGA8S	H3BPF8	625 aa		11.71	□□□□□ -0.54
SUPT5H-216	ENST00000599335	GMNN	O75496	209 aa		11.71	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms