RNA–Protein interactions for RNA: ENST00000599165.5

LIG1-217, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-217ENST00000599165 TJP2Q9UDY2 1190 aa12.72□□□□□ -0.37
LIG1-217ENST00000599165 EBF1Q9UH73 591 aa12.72□□□□□ -0.37
LIG1-217ENST00000599165 SFMBT1Q9UHJ3 866 aa12.72□□□□□ -0.37
LIG1-217ENST00000599165 THADAQ6YHU6 1953 aa12.72□□□□□ -0.37
LIG1-217ENST00000599165 GON4LQ3T8J9 2241 aa12.72□□□□□ -0.37
LIG1-217ENST00000599165 CKAP5Q14008 2032 aa12.71□□□□□ -0.37
LIG1-217ENST00000599165 SLC12A8A0AV02 714 aa12.71□□□□□ -0.37
LIG1-217ENST00000599165 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.71□□□□□ -0.37
LIG1-217ENST00000599165 DCLK1O15075 740 aa12.71□□□□□ -0.37
LIG1-217ENST00000599165 AXIN1O15169 862 aa12.71□□□□□ -0.37
LIG1-217ENST00000599165 MSI1O43347 362 aaKnown RBP12.71□□□□□ -0.37
LIG1-217ENST00000599165 KLF8O95600 359 aaPredicted RBP12.71□□□□□ -0.37
LIG1-217ENST00000599165 APBB3O95704 486 aa12.71□□□□□ -0.37
LIG1-217ENST00000599165 IGLV3-27P01718 113 aa12.71□□□□□ -0.37
LIG1-217ENST00000599165 PNMA6AP0CW24 399 aaPredicted RBP12.71□□□□□ -0.37
LIG1-217ENST00000599165 KRT5P13647 590 aa12.71□□□□□ -0.37
LIG1-217ENST00000599165 TIE1P35590 1138 aa12.71□□□□□ -0.37
LIG1-217ENST00000599165 TNFRSF4P43489 277 aa12.71□□□□□ -0.37
LIG1-217ENST00000599165 SLC8A3P57103 927 aa12.71□□□□□ -0.37
LIG1-217ENST00000599165 COG7P83436 770 aa12.71□□□□□ -0.37
LIG1-217ENST00000599165 STILQ15468 1287 aa12.71□□□□□ -0.37
LIG1-217ENST00000599165 MAN2A1Q16706 1144 aa12.71□□□□□ -0.37
LIG1-217ENST00000599165 EXOC3L4Q17RC7 722 aa12.71□□□□□ -0.37
LIG1-217ENST00000599165 LAIR1Q6GTX8 287 aa12.71□□□□□ -0.37
LIG1-217ENST00000599165 GBP6Q6ZN66 633 aa12.71□□□□□ -0.37
LIG1-217ENST00000599165 PRR23BQ6ZRT6 265 aa12.71□□□□□ -0.37
LIG1-217ENST00000599165 TADA2BQ86TJ2 420 aa12.71□□□□□ -0.37
LIG1-217ENST00000599165 KBTBD6Q86V97 674 aa12.71□□□□□ -0.37
LIG1-217ENST00000599165 DENND1CQ8IV53 801 aa12.71□□□□□ -0.37
LIG1-217ENST00000599165 FMNL3Q8IVF7 1028 aa12.71□□□□□ -0.37
LIG1-217ENST00000599165 WDTC1Q8N5D0 677 aa12.71□□□□□ -0.37
LIG1-217ENST00000599165 MDGA1Q8NFP4 955 aa12.71□□□□□ -0.37
LIG1-217ENST00000599165 ZNF606Q8WXB4 792 aa12.71□□□□□ -0.37
LIG1-217ENST00000599165 BHMTQ93088 406 aa12.71□□□□□ -0.37
LIG1-217ENST00000599165 PIWIL1Q96J94 861 aaKnown RBP12.71□□□□□ -0.37
LIG1-217ENST00000599165 HSFY1Q96LI6 401 aa12.71□□□□□ -0.37
LIG1-217ENST00000599165 CDK5RAP1Q96SZ6 601 aaKnown RBP12.71□□□□□ -0.37
LIG1-217ENST00000599165 ACOX2Q99424 681 aa12.71□□□□□ -0.37
LIG1-217ENST00000599165 SLC4A5Q9BY07 1137 aa12.71□□□□□ -0.37
LIG1-217ENST00000599165 DNAJC17Q9NVM6 304 aaKnown RBP12.71□□□□□ -0.37
LIG1-217ENST00000599165 DEC1Q9P2X7 70 aa12.71□□□□□ -0.37
LIG1-217ENST00000599165 NCDNQ9UBB6 729 aa12.71□□□□□ -0.37
LIG1-217ENST00000599165 LSM7Q9UK45 103 aaKnown RBP12.71□□□□□ -0.37
LIG1-217ENST00000599165 STARD13Q9Y3M8 1113 aa12.71□□□□□ -0.37
LIG1-217ENST00000599165 SPTBN2O15020 2390 aa12.71□□□□□ -0.38
LIG1-217ENST00000599165 PAPSS1O43252 624 aaPredicted RBP12.7□□□□□ -0.38
LIG1-217ENST00000599165 RPP40O75818 363 aaKnown RBP12.7□□□□□ -0.38
LIG1-217ENST00000599165 LETM1O95202 739 aaPredicted RBP12.7□□□□□ -0.38
LIG1-217ENST00000599165 MTIF2P46199 727 aaKnown RBP12.7□□□□□ -0.38
LIG1-217ENST00000599165 GOLGA8FQ08AF8 430 aa12.7□□□□□ -0.38
LIG1-217ENST00000599165 GOLGA8DPQ0D2H9 430 aa12.7□□□□□ -0.38
LIG1-217ENST00000599165 MEA1Q16626 185 aa12.7□□□□□ -0.38
LIG1-217ENST00000599165 ARHGAP44Q17R89 818 aa12.7□□□□□ -0.38
LIG1-217ENST00000599165 C10orf76Q5T2E6 689 aa12.7□□□□□ -0.38
LIG1-217ENST00000599165 BTBD8Q5XKL5 378 aa12.7□□□□□ -0.38
LIG1-217ENST00000599165 EGFLAMQ63HQ2 1017 aa12.7□□□□□ -0.38
LIG1-217ENST00000599165 RSRC2Q7L4I2 434 aaKnown RBP12.7□□□□□ -0.38
LIG1-217ENST00000599165 CREBRFQ8IUR6 639 aa12.7□□□□□ -0.38
LIG1-217ENST00000599165 SIX6OS1Q8N1H7 587 aa12.7□□□□□ -0.38
LIG1-217ENST00000599165 CPXM2Q8N436 756 aa12.7□□□□□ -0.38
LIG1-217ENST00000599165 OLIG1Q8TAK6 271 aa12.7□□□□□ -0.38
LIG1-217ENST00000599165 IRGQQ8WZA9 623 aa12.7□□□□□ -0.38
LIG1-217ENST00000599165 RMDN1Q96DB5 314 aa12.7□□□□□ -0.38
LIG1-217ENST00000599165 IPO9Q96P70 1041 aaKnown RBP12.7□□□□□ -0.38
LIG1-217ENST00000599165 TPSD1Q9BZJ3 242 aa12.7□□□□□ -0.38
LIG1-217ENST00000599165 NDST4Q9H3R1 872 aa12.7□□□□□ -0.38
LIG1-217ENST00000599165 ABCC13Q9NSE7 274 aa12.7□□□□□ -0.38
LIG1-217ENST00000599165 WDR35Q9P2L0 1181 aa12.7□□□□□ -0.38
LIG1-217ENST00000599165 STOML2Q9UJZ1 356 aa12.7□□□□□ -0.38
LIG1-217ENST00000599165 CEP192Q8TEP8 1941 aa12.7□□□□□ -0.38
LIG1-217ENST00000599165 A0A1W2PQF6 199 aa12.69□□□□□ -0.38
LIG1-217ENST00000599165 TBC1D3BA6NDS4 549 aa12.69□□□□□ -0.38
LIG1-217ENST00000599165 LTFP02788 710 aa12.69□□□□□ -0.38
LIG1-217ENST00000599165 RETP07949 1114 aa12.69□□□□□ -0.38
LIG1-217ENST00000599165 GNA15P30679 374 aa12.69□□□□□ -0.38
LIG1-217ENST00000599165 CLCN1P35523 988 aa12.69□□□□□ -0.38
LIG1-217ENST00000599165 SGSHP51688 502 aa12.69□□□□□ -0.38
LIG1-217ENST00000599165 MFAP3P55082 362 aa12.69□□□□□ -0.38
LIG1-217ENST00000599165 SPEM2Q0P670 501 aa12.69□□□□□ -0.38
LIG1-217ENST00000599165 GEN1Q17RS7 908 aa12.69□□□□□ -0.38
LIG1-217ENST00000599165 PLK5Q496M5 336 aa12.69□□□□□ -0.38
LIG1-217ENST00000599165 VWA3BQ502W6 1294 aa12.69□□□□□ -0.38
LIG1-217ENST00000599165 CDKAL1Q5VV42 579 aa12.69□□□□□ -0.38
LIG1-217ENST00000599165 RNF43Q68DV7 783 aa12.69□□□□□ -0.38
LIG1-217ENST00000599165 GRAMD4Q6IC98 578 aa12.69□□□□□ -0.38
LIG1-217ENST00000599165 ANO7Q6IWH7 933 aa12.69□□□□□ -0.38
LIG1-217ENST00000599165 C11orf57Q6ZUT1 292 aaPredicted RBP12.69□□□□□ -0.38
LIG1-217ENST00000599165 ENOSF1Q7L5Y1 443 aa12.69□□□□□ -0.38
LIG1-217ENST00000599165 TMEM110Q86TL2 294 aa12.69□□□□□ -0.38
LIG1-217ENST00000599165 SCUBE3Q8IX30 993 aa12.69□□□□□ -0.38
LIG1-217ENST00000599165 TSTD1Q8NFU3 115 aa12.69□□□□□ -0.38
LIG1-217ENST00000599165 STK32AQ8WU08 396 aa12.69□□□□□ -0.38
LIG1-217ENST00000599165 PLD4Q96BZ4 506 aa12.69□□□□□ -0.38
LIG1-217ENST00000599165 MYEOVQ96EZ4 313 aa12.69□□□□□ -0.38
LIG1-217ENST00000599165 ZC3H10Q96K80 434 aaKnown RBP12.69□□□□□ -0.38
LIG1-217ENST00000599165 HINFPQ9BQA5 517 aa12.69□□□□□ -0.38
LIG1-217ENST00000599165 TUBGCP2Q9BSJ2 902 aa12.69□□□□□ -0.38
LIG1-217ENST00000599165 NAA15Q9BXJ9 866 aaKnown RBP12.69□□□□□ -0.38
LIG1-217ENST00000599165 MIS12Q9H081 205 aa12.69□□□□□ -0.38
LIG1-217ENST00000599165 DUSP15Q9H1R2 295 aaPredicted RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms