RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 RGS16O15492 202 aaPredicted RBP17.7■□□□□ 0.42
SHKBP1-216ENST00000598201 CLTBP09497 229 aa17.7■□□□□ 0.42
SHKBP1-216ENST00000598201 BDNFP23560 247 aa17.7■□□□□ 0.42
SHKBP1-216ENST00000598201 PPP2R2AP63151 447 aa17.7■□□□□ 0.42
SHKBP1-216ENST00000598201 FAM189BP81408 668 aa17.7■□□□□ 0.42
SHKBP1-216ENST00000598201 SLC10A2Q12908 348 aaPredicted RBP17.7■□□□□ 0.42
SHKBP1-216ENST00000598201 OVOS1Q6IE37 1185 aa17.7■□□□□ 0.42
SHKBP1-216ENST00000598201 GLB1LQ6UWU2 654 aa17.7■□□□□ 0.42
SHKBP1-216ENST00000598201 NAT8LQ8N9F0 302 aa17.7■□□□□ 0.42
SHKBP1-216ENST00000598201 SUSD3Q96L08 255 aa17.7■□□□□ 0.42
SHKBP1-216ENST00000598201 CSNK1G1Q9HCP0 422 aa17.7■□□□□ 0.42
SHKBP1-216ENST00000598201 CWC15Q9P013 229 aaKnown RBP17.7■□□□□ 0.42
SHKBP1-216ENST00000598201 MFHAS1Q9Y4C4 1052 aa17.7■□□□□ 0.42
SHKBP1-216ENST00000598201 USP3Q9Y6I4 520 aa17.7■□□□□ 0.42
SHKBP1-216ENST00000598201 EIF3HO15372 352 aaKnown RBP eCLIP17.7■□□□□ 0.42
SHKBP1-216ENST00000598201 BANF1O75531 89 aa17.7■□□□□ 0.42
SHKBP1-216ENST00000598201 FBXO21O94952 628 aa17.7■□□□□ 0.42
SHKBP1-216ENST00000598201 EOMESO95936 686 aa17.7■□□□□ 0.42
SHKBP1-216ENST00000598201 STIP1P31948 543 aaKnown RBP17.7■□□□□ 0.42
SHKBP1-216ENST00000598201 MDH1P40925 334 aaKnown RBP17.7■□□□□ 0.42
SHKBP1-216ENST00000598201 GBE1Q04446 702 aa17.7■□□□□ 0.42
SHKBP1-216ENST00000598201 TNFAIP8L3Q5GJ75 292 aa17.7■□□□□ 0.42
SHKBP1-216ENST00000598201 LEKR1Q6ZMV7 388 aa17.7■□□□□ 0.42
SHKBP1-216ENST00000598201 BHLHA9Q7RTU4 235 aa17.7■□□□□ 0.42
SHKBP1-216ENST00000598201 PPIL6Q8IXY8 311 aa17.7■□□□□ 0.42
SHKBP1-216ENST00000598201 ROPN1BQ9BZX4 212 aaPredicted RBP17.7■□□□□ 0.42
SHKBP1-216ENST00000598201 ROPN1Q9HAT0 212 aaPredicted RBP17.7■□□□□ 0.42
SHKBP1-216ENST00000598201 CNGB3Q9NQW8 809 aa17.7■□□□□ 0.42
SHKBP1-216ENST00000598201 PIGVQ9NUD9 493 aa17.7■□□□□ 0.42
SHKBP1-216ENST00000598201 TMEM39AQ9NV64 488 aa17.7■□□□□ 0.42
SHKBP1-216ENST00000598201 ETNK2Q9NVF9 386 aa17.7■□□□□ 0.42
SHKBP1-216ENST00000598201 TMEM63AO94886 807 aa17.69■□□□□ 0.42
SHKBP1-216ENST00000598201 GOT1P17174 413 aa17.69■□□□□ 0.42
SHKBP1-216ENST00000598201 RBL1P28749 1068 aa17.69■□□□□ 0.42
SHKBP1-216ENST00000598201 DSC1Q08554 894 aa17.69■□□□□ 0.42
SHKBP1-216ENST00000598201 NME3Q13232 169 aa17.69■□□□□ 0.42
SHKBP1-216ENST00000598201 GPNMBQ14956 572 aa17.69■□□□□ 0.42
SHKBP1-216ENST00000598201 PCGF5Q86SE9 256 aa17.69■□□□□ 0.42
SHKBP1-216ENST00000598201 CCDC33Q8N5R6 958 aa17.69■□□□□ 0.42
SHKBP1-216ENST00000598201 ADAM32Q8TC27 787 aa17.69■□□□□ 0.42
SHKBP1-216ENST00000598201 DPF3Q92784 378 aa17.69■□□□□ 0.42
SHKBP1-216ENST00000598201 RABEP2Q9H5N1 569 aa17.69■□□□□ 0.42
SHKBP1-216ENST00000598201 CTNNAL1Q9UBT7 734 aa17.69■□□□□ 0.42
SHKBP1-216ENST00000598201 DSEQ9UL01 958 aa17.69■□□□□ 0.42
SHKBP1-216ENST00000598201 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.69■□□□□ 0.42
SHKBP1-216ENST00000598201 AMPD1P23109 780 aa17.68■□□□□ 0.42
SHKBP1-216ENST00000598201 RDXP35241 583 aaKnown RBP17.68■□□□□ 0.42
SHKBP1-216ENST00000598201 NOMO2Q5JPE7 1267 aa17.68■□□□□ 0.42
SHKBP1-216ENST00000598201 FNBP1LQ5T0N5 605 aa17.68■□□□□ 0.42
SHKBP1-216ENST00000598201 MFSD5Q6N075 450 aa17.68■□□□□ 0.42
SHKBP1-216ENST00000598201 LRRC8DQ7L1W4 858 aa17.68■□□□□ 0.42
SHKBP1-216ENST00000598201 ARFGAP2Q8N6H7 521 aa17.68■□□□□ 0.42
SHKBP1-216ENST00000598201 SLC7A14Q8TBB6 771 aa17.68■□□□□ 0.42
SHKBP1-216ENST00000598201 STAP1Q9ULZ2 295 aa17.68■□□□□ 0.42
SHKBP1-216ENST00000598201 KCNN4O15554 427 aa17.68■□□□□ 0.42
SHKBP1-216ENST00000598201 NBNO60934 754 aa17.68■□□□□ 0.42
SHKBP1-216ENST00000598201 ZBED1O96006 694 aa17.68■□□□□ 0.42
SHKBP1-216ENST00000598201 AGTP01019 485 aa17.68■□□□□ 0.42
SHKBP1-216ENST00000598201 DEUP1Q05D60 604 aa17.68■□□□□ 0.42
SHKBP1-216ENST00000598201 ZSCAN26Q16670 478 aa17.68■□□□□ 0.42
SHKBP1-216ENST00000598201 MSS51Q4VC12 460 aa17.68■□□□□ 0.42
SHKBP1-216ENST00000598201 FOXR1Q6PIV2 292 aa17.68■□□□□ 0.42
SHKBP1-216ENST00000598201 CROCCP2Q86T23 111 aa17.68■□□□□ 0.42
SHKBP1-216ENST00000598201 CCDC13Q8IYE1 715 aa17.68■□□□□ 0.42
SHKBP1-216ENST00000598201 HIPK3Q9H422 1215 aa17.68■□□□□ 0.42
SHKBP1-216ENST00000598201 ANLNQ9NQW6 1124 aa17.68■□□□□ 0.42
SHKBP1-216ENST00000598201 PRDM5Q9NQX1 630 aaPredicted RBP17.68■□□□□ 0.42
SHKBP1-216ENST00000598201 TBC1D13Q9NVG8 400 aa17.68■□□□□ 0.42
SHKBP1-216ENST00000598201 TBX21Q9UL17 535 aa17.68■□□□□ 0.42
SHKBP1-216ENST00000598201 BCLAF3A2AJT9 711 aaKnown RBP17.67■□□□□ 0.42
SHKBP1-216ENST00000598201 CAPN9O14815 690 aa17.67■□□□□ 0.42
SHKBP1-216ENST00000598201 ALOX15BO15296 676 aa17.67■□□□□ 0.42
SHKBP1-216ENST00000598201 AMHP03971 560 aa17.67■□□□□ 0.42
SHKBP1-216ENST00000598201 SELPP16109 830 aa17.67■□□□□ 0.42
SHKBP1-216ENST00000598201 LSP1P33241 339 aa17.67■□□□□ 0.42
SHKBP1-216ENST00000598201 BASP1P80723 227 aaKnown RBP17.67■□□□□ 0.42
SHKBP1-216ENST00000598201 PDIA2Q13087 525 aaKnown RBP17.67■□□□□ 0.42
SHKBP1-216ENST00000598201 MTM1Q13496 603 aa17.67■□□□□ 0.42
SHKBP1-216ENST00000598201 BFSP2Q13515 415 aa17.67■□□□□ 0.42
SHKBP1-216ENST00000598201 CCDC38Q502W7 563 aa17.67■□□□□ 0.42
SHKBP1-216ENST00000598201 NCBP2-AS2Q69YL0 99 aa17.67■□□□□ 0.42
SHKBP1-216ENST00000598201 CEP128Q6ZU80 1094 aa17.67■□□□□ 0.42
SHKBP1-216ENST00000598201 COLGALT2Q8IYK4 626 aa17.67■□□□□ 0.42
SHKBP1-216ENST00000598201 ZBED8Q8IZ13 594 aa17.67■□□□□ 0.42
SHKBP1-216ENST00000598201 C7orf61Q8IZ16 206 aa17.67■□□□□ 0.42
SHKBP1-216ENST00000598201 MDM1Q8TC05 714 aa17.67■□□□□ 0.42
SHKBP1-216ENST00000598201 RTP4Q96DX8 246 aa17.67■□□□□ 0.42
SHKBP1-216ENST00000598201 SERPINB12Q96P63 405 aa17.67■□□□□ 0.42
SHKBP1-216ENST00000598201 WDR83Q9BRX9 315 aaKnown RBP17.67■□□□□ 0.42
SHKBP1-216ENST00000598201 DNAJB4Q9UDY4 337 aa17.67■□□□□ 0.42
SHKBP1-216ENST00000598201 ALPK3Q96L96 1907 aa17.67■□□□□ 0.42
SHKBP1-216ENST00000598201 I6L893 689 aaPredicted RBP17.67■□□□□ 0.42
SHKBP1-216ENST00000598201 NDC80O14777 642 aa17.67■□□□□ 0.42
SHKBP1-216ENST00000598201 LTFP02788 710 aa17.67■□□□□ 0.42
SHKBP1-216ENST00000598201 NCAM1P13591 858 aa17.67■□□□□ 0.42
SHKBP1-216ENST00000598201 TYMPP19971 482 aa17.67■□□□□ 0.42
SHKBP1-216ENST00000598201 PAX3P23760 479 aa17.67■□□□□ 0.42
SHKBP1-216ENST00000598201 HIF1AQ16665 826 aa17.67■□□□□ 0.42
SHKBP1-216ENST00000598201 SYCP2LQ5T4T6 812 aa17.67■□□□□ 0.42
SHKBP1-216ENST00000598201 CENPUQ71F23 418 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms