RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 PLEKHA7Q6IQ23 1121 aa23.07■■□□□ 1.28
CHMP2A-204ENST00000597848 CC2D1AQ6P1N0 951 aaPredicted RBP23.07■■□□□ 1.28
CHMP2A-204ENST00000597848 ARCQ7LC44 396 aa23.07■■□□□ 1.28
CHMP2A-204ENST00000597848 TAC4Q86UU9 113 aa23.07■■□□□ 1.28
CHMP2A-204ENST00000597848 TMEM139Q8IV31 216 aa23.07■■□□□ 1.28
CHMP2A-204ENST00000597848 MFSD6LQ8IWD5 586 aa23.07■■□□□ 1.28
CHMP2A-204ENST00000597848 RXFP2Q8WXD0 754 aa23.07■■□□□ 1.28
CHMP2A-204ENST00000597848 SERPINB11Q96P15 392 aa23.07■■□□□ 1.28
CHMP2A-204ENST00000597848 LRRC3BQ96PB8 259 aa23.07■■□□□ 1.28
CHMP2A-204ENST00000597848 MCEEQ96PE7 176 aa23.07■■□□□ 1.28
CHMP2A-204ENST00000597848 PACSIN1Q9BY11 444 aa23.07■■□□□ 1.28
CHMP2A-204ENST00000597848 THG1LQ9NWX6 298 aaKnown RBP23.07■■□□□ 1.28
CHMP2A-204ENST00000597848 RRN3Q9NYV6 651 aa23.07■■□□□ 1.28
CHMP2A-204ENST00000597848 COX16Q9P0S2 106 aa23.07■■□□□ 1.28
CHMP2A-204ENST00000597848 HBS1LQ9Y450 684 aaKnown RBP23.07■■□□□ 1.28
CHMP2A-204ENST00000597848 SCINQ9Y6U3 715 aa23.07■■□□□ 1.28
CHMP2A-204ENST00000597848 ZNF263O14978 683 aa23.06■■□□□ 1.28
CHMP2A-204ENST00000597848 NDUFA10O95299 355 aa23.06■■□□□ 1.28
CHMP2A-204ENST00000597848 IPO7O95373 1038 aaKnown RBP23.06■■□□□ 1.28
CHMP2A-204ENST00000597848 PSMC3P17980 439 aa23.06■■□□□ 1.28
CHMP2A-204ENST00000597848 SDC4P31431 198 aa23.06■■□□□ 1.28
CHMP2A-204ENST00000597848 MAGEA1P43355 309 aa23.06■■□□□ 1.28
CHMP2A-204ENST00000597848 SULT1E1P49888 294 aa23.06■■□□□ 1.28
CHMP2A-204ENST00000597848 KPNA1P52294 538 aaPredicted RBP23.06■■□□□ 1.28
CHMP2A-204ENST00000597848 PITX1P78337 314 aaPredicted RBP23.06■■□□□ 1.28
CHMP2A-204ENST00000597848 ZNF77Q15935 545 aa23.06■■□□□ 1.28
CHMP2A-204ENST00000597848 C10orf76Q5T2E6 689 aa23.06■■□□□ 1.28
CHMP2A-204ENST00000597848 RAD9BQ6WBX8 426 aa23.06■■□□□ 1.28
CHMP2A-204ENST00000597848 SLC44A3Q8N4M1 653 aa23.06■■□□□ 1.28
CHMP2A-204ENST00000597848 DEPDC1BQ8WUY9 529 aa23.06■■□□□ 1.28
CHMP2A-204ENST00000597848 CTNNBL1Q8WYA6 563 aaPredicted RBP23.06■■□□□ 1.28
CHMP2A-204ENST00000597848 DDX23Q9BUQ8 820 aaKnown RBP23.06■■□□□ 1.28
CHMP2A-204ENST00000597848 TRMT61BQ9BVS5 477 aaKnown RBP23.06■■□□□ 1.28
CHMP2A-204ENST00000597848 MRPL47Q9HD33 250 aaKnown RBP23.06■■□□□ 1.28
CHMP2A-204ENST00000597848 DDIT4Q9NX09 232 aa23.06■■□□□ 1.28
CHMP2A-204ENST00000597848 LSM7Q9UK45 103 aaKnown RBP23.06■■□□□ 1.28
CHMP2A-204ENST00000597848 EIF3CLB5ME19 914 aaKnown RBP23.05■■□□□ 1.28
CHMP2A-204ENST00000597848 M0QYT0 321 aa23.05■■□□□ 1.28
CHMP2A-204ENST00000597848 SCAMP3O14828 347 aaKnown RBP23.05■■□□□ 1.28
CHMP2A-204ENST00000597848 TCF3P15923 654 aa23.05■■□□□ 1.28
CHMP2A-204ENST00000597848 GPD1P21695 349 aa23.05■■□□□ 1.28
CHMP2A-204ENST00000597848 TBX4P57082 545 aa23.05■■□□□ 1.28
CHMP2A-204ENST00000597848 RPL7AP62424 266 aaKnown RBP23.05■■□□□ 1.28
CHMP2A-204ENST00000597848 USP4Q13107 963 aa23.05■■□□□ 1.28
CHMP2A-204ENST00000597848 NME3Q13232 169 aa23.05■■□□□ 1.28
CHMP2A-204ENST00000597848 TRIP4Q15650 581 aaPredicted RBP23.05■■□□□ 1.28
CHMP2A-204ENST00000597848 PPP1R15BQ5SWA1 713 aa23.05■■□□□ 1.28
CHMP2A-204ENST00000597848 TRNP1Q6NT89 227 aa23.05■■□□□ 1.28
CHMP2A-204ENST00000597848 RNF135Q8IUD6 432 aa23.05■■□□□ 1.28
CHMP2A-204ENST00000597848 CFAP57Q96MR6 1250 aa23.05■■□□□ 1.28
CHMP2A-204ENST00000597848 NPY6RQ99463 290 aa23.05■■□□□ 1.28
CHMP2A-204ENST00000597848 EIF3CQ99613 913 aaKnown RBP23.05■■□□□ 1.28
CHMP2A-204ENST00000597848 LUC7LQ9NQ29 371 aaKnown RBP23.05■■□□□ 1.28
CHMP2A-204ENST00000597848 C2CD4BA6NLJ0 364 aa23.04■■□□□ 1.28
CHMP2A-204ENST00000597848 NRDCO43847 1150 aa23.04■■□□□ 1.28
CHMP2A-204ENST00000597848 STC2O76061 302 aa23.04■■□□□ 1.28
CHMP2A-204ENST00000597848 CYP1A2P05177 515 aa23.04■■□□□ 1.28
CHMP2A-204ENST00000597848 TMEM253P0C7T8 217 aa23.04■■□□□ 1.28
CHMP2A-204ENST00000597848 GDI1P31150 447 aa23.04■■□□□ 1.28
CHMP2A-204ENST00000597848 ATP11AP98196 1134 aa23.04■■□□□ 1.28
CHMP2A-204ENST00000597848 TDGQ13569 410 aa23.04■■□□□ 1.28
CHMP2A-204ENST00000597848 SLC25A52Q3SY17 297 aa23.04■■□□□ 1.28
CHMP2A-204ENST00000597848 LRRC8AQ8IWT6 810 aa23.04■■□□□ 1.28
CHMP2A-204ENST00000597848 CCDC112Q8NEF3 446 aa23.04■■□□□ 1.28
CHMP2A-204ENST00000597848 RIN3Q8TB24 985 aa23.04■■□□□ 1.28
CHMP2A-204ENST00000597848 RNF34Q969K3 372 aa23.04■■□□□ 1.28
CHMP2A-204ENST00000597848 WBP2Q969T9 261 aa23.04■■□□□ 1.28
CHMP2A-204ENST00000597848 PLD4Q96BZ4 506 aa23.04■■□□□ 1.28
CHMP2A-204ENST00000597848 ARHGEF26Q96DR7 871 aa23.04■■□□□ 1.28
CHMP2A-204ENST00000597848 UHRF1Q96T88 793 aaPredicted RBP23.04■■□□□ 1.28
CHMP2A-204ENST00000597848 TBCBQ99426 244 aa23.04■■□□□ 1.28
CHMP2A-204ENST00000597848 NUP85Q9BW27 656 aa23.04■■□□□ 1.28
CHMP2A-204ENST00000597848 TLR6Q9Y2C9 796 aa23.04■■□□□ 1.28
CHMP2A-204ENST00000597848 PCDHA13Q9Y5I0 950 aa23.04■■□□□ 1.28
CHMP2A-204ENST00000597848 XIRP2A4UGR9 3374 aa23.04■■□□□ 1.28
CHMP2A-204ENST00000597848 E2F8A0AVK6 867 aa23.03■■□□□ 1.28
CHMP2A-204ENST00000597848 LCA5LO95447 670 aa23.03■■□□□ 1.28
CHMP2A-204ENST00000597848 TFE3P19532 575 aaPredicted RBP23.03■■□□□ 1.28
CHMP2A-204ENST00000597848 HARS2P49590 506 aaKnown RBP23.03■■□□□ 1.28
CHMP2A-204ENST00000597848 CCDC14Q49A88 953 aa23.03■■□□□ 1.28
CHMP2A-204ENST00000597848 SND1Q7KZF4 910 aaKnown RBP eCLIP23.03■■□□□ 1.28
CHMP2A-204ENST00000597848 PDLIM2Q96JY6 352 aa23.03■■□□□ 1.28
CHMP2A-204ENST00000597848 DCLK3Q9C098 648 aa23.03■■□□□ 1.28
CHMP2A-204ENST00000597848 BRD9Q9H8M2 597 aa23.03■■□□□ 1.28
CHMP2A-204ENST00000597848 CD320Q9NPF0 282 aa23.03■■□□□ 1.28
CHMP2A-204ENST00000597848 DUS2Q9NX74 493 aaKnown RBP23.03■■□□□ 1.28
CHMP2A-204ENST00000597848 CTTNBP2NLQ9P2B4 639 aa23.03■■□□□ 1.28
CHMP2A-204ENST00000597848 TMEM191CA6NGB0 347 aa23.02■■□□□ 1.28
CHMP2A-204ENST00000597848 IRAK2O43187 625 aa23.02■■□□□ 1.28
CHMP2A-204ENST00000597848 F9P00740 461 aa23.02■■□□□ 1.28
CHMP2A-204ENST00000597848 IGLV3-25P01717 112 aa23.02■■□□□ 1.28
CHMP2A-204ENST00000597848 DESP17661 470 aa23.02■■□□□ 1.28
CHMP2A-204ENST00000597848 CORO1AP31146 461 aaKnown RBP23.02■■□□□ 1.28
CHMP2A-204ENST00000597848 IFNAR2P48551 515 aa23.02■■□□□ 1.28
CHMP2A-204ENST00000597848 DEUP1Q05D60 604 aa23.02■■□□□ 1.28
CHMP2A-204ENST00000597848 FCHO2Q0JRZ9 810 aa23.02■■□□□ 1.28
CHMP2A-204ENST00000597848 NNTQ13423 1086 aa23.02■■□□□ 1.28
CHMP2A-204ENST00000597848 CDO1Q16878 200 aa23.02■■□□□ 1.28
CHMP2A-204ENST00000597848 C15orf59Q2T9L4 293 aaPredicted RBP23.02■■□□□ 1.28
CHMP2A-204ENST00000597848 ARHGAP29Q52LW3 1261 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms