RNA–Protein interactions for RNA: ENST00000594387.1

IRF3-208, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-208ENST00000594387 HBS1LQ9Y450 684 aaKnown RBP18.15■□□□□ 0.5
IRF3-208ENST00000594387 CAPN9O14815 690 aa18.14■□□□□ 0.49
IRF3-208ENST00000594387 CALCAP01258 141 aa18.14■□□□□ 0.49
IRF3-208ENST00000594387 KRT9P35527 623 aa18.14■□□□□ 0.49
IRF3-208ENST00000594387 TIE1P35590 1138 aa18.14■□□□□ 0.49
IRF3-208ENST00000594387 E2F5Q15329 346 aa18.14■□□□□ 0.49
IRF3-208ENST00000594387 STX1AQ16623 288 aa18.14■□□□□ 0.49
IRF3-208ENST00000594387 FKBP15Q5T1M5 1219 aa18.14■□□□□ 0.49
IRF3-208ENST00000594387 C10orf76Q5T2E6 689 aa18.14■□□□□ 0.49
IRF3-208ENST00000594387 CCDC183Q5T5S1 534 aa18.14■□□□□ 0.49
IRF3-208ENST00000594387 Q6ZNB5 142 aa18.14■□□□□ 0.49
IRF3-208ENST00000594387 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.14■□□□□ 0.49
IRF3-208ENST00000594387 C12orf40Q86WS4 652 aa18.14■□□□□ 0.49
IRF3-208ENST00000594387 CCDC33Q8N5R6 958 aa18.14■□□□□ 0.49
IRF3-208ENST00000594387 STK32AQ8WU08 396 aa18.14■□□□□ 0.49
IRF3-208ENST00000594387 FAM149B1Q96BN6 582 aa18.14■□□□□ 0.49
IRF3-208ENST00000594387 ZSWIM1Q9BR11 485 aa18.14■□□□□ 0.49
IRF3-208ENST00000594387 POLMQ9NP87 494 aaPredicted RBP18.14■□□□□ 0.49
IRF3-208ENST00000594387 C2orf42Q9NWW7 574 aa18.14■□□□□ 0.49
IRF3-208ENST00000594387 MARK1Q9P0L2 795 aa18.14■□□□□ 0.49
IRF3-208ENST00000594387 SFMBT1Q9UHJ3 866 aa18.14■□□□□ 0.49
IRF3-208ENST00000594387 MMP17Q9ULZ9 603 aa18.14■□□□□ 0.49
IRF3-208ENST00000594387 CEP83Q9Y592 693 aa18.14■□□□□ 0.49
IRF3-208ENST00000594387 AXIN1O15169 862 aa18.13■□□□□ 0.49
IRF3-208ENST00000594387 CACNG3O60359 315 aa18.13■□□□□ 0.49
IRF3-208ENST00000594387 GREM1O60565 184 aa18.13■□□□□ 0.49
IRF3-208ENST00000594387 KLF8O95600 359 aaPredicted RBP18.13■□□□□ 0.49
IRF3-208ENST00000594387 NCAM1P13591 858 aa18.13■□□□□ 0.49
IRF3-208ENST00000594387 CDK11BP21127 795 aaKnown RBP18.13■□□□□ 0.49
IRF3-208ENST00000594387 GPD2P43304 727 aa18.13■□□□□ 0.49
IRF3-208ENST00000594387 DGKGP49619 791 aa18.13■□□□□ 0.49
IRF3-208ENST00000594387 DGKEP52429 567 aa18.13■□□□□ 0.49
IRF3-208ENST00000594387 ZNF445P59923 1031 aa18.13■□□□□ 0.49
IRF3-208ENST00000594387 DMWDQ09019 674 aa18.13■□□□□ 0.49
IRF3-208ENST00000594387 RAPGEF1Q13905 1077 aa18.13■□□□□ 0.49
IRF3-208ENST00000594387 LAIR1Q6GTX8 287 aa18.13■□□□□ 0.49
IRF3-208ENST00000594387 RBM43Q6ZSC3 357 aaKnown RBP18.13■□□□□ 0.49
IRF3-208ENST00000594387 UNC45BQ8IWX7 931 aa18.13■□□□□ 0.49
IRF3-208ENST00000594387 SCUBE3Q8IX30 993 aa18.13■□□□□ 0.49
IRF3-208ENST00000594387 ETFBKMTQ8IXQ9 262 aa18.13■□□□□ 0.49
IRF3-208ENST00000594387 TERB1Q8NA31 727 aa18.13■□□□□ 0.49
IRF3-208ENST00000594387 DDI1Q8WTU0 396 aa18.13■□□□□ 0.49
IRF3-208ENST00000594387 SHC3Q92529 594 aa18.13■□□□□ 0.49
IRF3-208ENST00000594387 EZH1Q92800 747 aaPredicted RBP18.13■□□□□ 0.49
IRF3-208ENST00000594387 HHIPQ96QV1 700 aa18.13■□□□□ 0.49
IRF3-208ENST00000594387 NAT10Q9H0A0 1025 aaKnown RBP18.13■□□□□ 0.49
IRF3-208ENST00000594387 AGO1Q9UL18 857 aaKnown RBP18.13■□□□□ 0.49
IRF3-208ENST00000594387 FAM186AA6NE01 2351 aa18.12■□□□□ 0.49
IRF3-208ENST00000594387 HRO43593 1189 aa18.12■□□□□ 0.49
IRF3-208ENST00000594387 RPP40O75818 363 aaKnown RBP18.12■□□□□ 0.49
IRF3-208ENST00000594387 PXNP49023 591 aaPredicted RBP18.12■□□□□ 0.49
IRF3-208ENST00000594387 MIIPQ5JXC2 388 aa18.12■□□□□ 0.49
IRF3-208ENST00000594387 DENND1BQ6P3S1 775 aa18.12■□□□□ 0.49
IRF3-208ENST00000594387 CPXM2Q8N436 756 aa18.12■□□□□ 0.49
IRF3-208ENST00000594387 ALLCQ8N6M5 410 aa18.12■□□□□ 0.49
IRF3-208ENST00000594387 ZNF513Q8N8E2 541 aaPredicted RBP18.12■□□□□ 0.49
IRF3-208ENST00000594387 TXNDC5Q8NBS9 432 aaKnown RBP18.12■□□□□ 0.49
IRF3-208ENST00000594387 GAB3Q8WWW8 586 aa18.12■□□□□ 0.49
IRF3-208ENST00000594387 BHMTQ93088 406 aa18.12■□□□□ 0.49
IRF3-208ENST00000594387 PLK2Q9NYY3 685 aa18.12■□□□□ 0.49
IRF3-208ENST00000594387 THADAQ6YHU6 1953 aa18.11■□□□□ 0.49
IRF3-208ENST00000594387 PTPRZ1P23471 2315 aaPredicted RBP18.11■□□□□ 0.49
IRF3-208ENST00000594387 ZFHX2Q9C0A1 2572 aaPredicted RBP18.11■□□□□ 0.49
IRF3-208ENST00000594387 KLKB1P03952 638 aa18.11■□□□□ 0.49
IRF3-208ENST00000594387 TRIP4Q15650 581 aaPredicted RBP18.11■□□□□ 0.49
IRF3-208ENST00000594387 LPAL2Q16609 132 aa18.11■□□□□ 0.49
IRF3-208ENST00000594387 MPPE1Q53F39 396 aa18.11■□□□□ 0.49
IRF3-208ENST00000594387 USP39Q53GS9 565 aaKnown RBP18.11■□□□□ 0.49
IRF3-208ENST00000594387 NUGGCQ68CJ6 796 aa18.11■□□□□ 0.49
IRF3-208ENST00000594387 BHLHA9Q7RTU4 235 aa18.11■□□□□ 0.49
IRF3-208ENST00000594387 CACNA2D4Q7Z3S7 1137 aa18.11■□□□□ 0.49
IRF3-208ENST00000594387 PGBD3Q8N328 593 aa18.11■□□□□ 0.49
IRF3-208ENST00000594387 UCMAQ8WVF2 138 aa18.11■□□□□ 0.49
IRF3-208ENST00000594387 DDX50Q9BQ39 737 aaKnown RBP18.11■□□□□ 0.49
IRF3-208ENST00000594387 SLC4A5Q9BY07 1137 aa18.11■□□□□ 0.49
IRF3-208ENST00000594387 VPS16Q9H269 839 aa18.11■□□□□ 0.49
IRF3-208ENST00000594387 SYNCQ9H7C4 482 aa18.11■□□□□ 0.49
IRF3-208ENST00000594387 TAB2Q9NYJ8 693 aa18.11■□□□□ 0.49
IRF3-208ENST00000594387 BCCIPQ9P287 314 aaKnown RBP eCLIP18.11■□□□□ 0.49
IRF3-208ENST00000594387 EBF1Q9UH73 591 aa18.11■□□□□ 0.49
IRF3-208ENST00000594387 CEP192Q8TEP8 1941 aa18.11■□□□□ 0.49
IRF3-208ENST00000594387 TYW5A2RUC4 315 aaKnown RBP18.1■□□□□ 0.49
IRF3-208ENST00000594387 BECN2A8MW95 431 aa18.1■□□□□ 0.49
IRF3-208ENST00000594387 FOXN3O00409 490 aaPredicted RBP18.1■□□□□ 0.49
IRF3-208ENST00000594387 LATS1O95835 1130 aa18.1■□□□□ 0.49
IRF3-208ENST00000594387 SLC11A2P49281 568 aa18.1■□□□□ 0.49
IRF3-208ENST00000594387 TBX4P57082 545 aa18.1■□□□□ 0.49
IRF3-208ENST00000594387 MYL5Q02045 173 aa18.1■□□□□ 0.49
IRF3-208ENST00000594387 APBA1Q02410 837 aa18.1■□□□□ 0.49
IRF3-208ENST00000594387 CRY1Q16526 586 aa18.1■□□□□ 0.49
IRF3-208ENST00000594387 EMC10Q5UCC4 262 aa18.1■□□□□ 0.49
IRF3-208ENST00000594387 MSANTD2Q6P1R3 559 aa18.1■□□□□ 0.49
IRF3-208ENST00000594387 KIAA2013Q8IYS2 634 aa18.1■□□□□ 0.49
IRF3-208ENST00000594387 IL17RCQ8NAC3 791 aa18.1■□□□□ 0.49
IRF3-208ENST00000594387 CLEC4CQ8WTT0 213 aa18.1■□□□□ 0.49
IRF3-208ENST00000594387 PCMTD1Q96MG8 357 aaPredicted RBP18.1■□□□□ 0.49
IRF3-208ENST00000594387 SERPINB11Q96P15 392 aa18.1■□□□□ 0.49
IRF3-208ENST00000594387 LSM14BQ9BX40 385 aaKnown RBP18.1■□□□□ 0.49
IRF3-208ENST00000594387 SLC2A11Q9BYW1 496 aa18.1■□□□□ 0.49
IRF3-208ENST00000594387 SIX2Q9NPC8 291 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms