RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 GOLGA1Q92805 767 aa14.58□□□□□ -0.08
CLIP3-205ENST00000592017 HSFY1Q96LI6 401 aa14.58□□□□□ -0.08
CLIP3-205ENST00000592017 HHIPQ96QV1 700 aa14.58□□□□□ -0.08
CLIP3-205ENST00000592017 FAM207AQ9NSI2 230 aaPredicted RBP14.58□□□□□ -0.08
CLIP3-205ENST00000592017 MARCH2Q9P0N8 246 aa14.58□□□□□ -0.08
CLIP3-205ENST00000592017 LIMA1Q9UHB6 759 aaKnown RBP14.58□□□□□ -0.08
CLIP3-205ENST00000592017 RAB23Q9ULC3 237 aa14.58□□□□□ -0.08
CLIP3-205ENST00000592017 HELZP42694 1942 aaKnown RBP14.58□□□□□ -0.08
CLIP3-205ENST00000592017 ZNF638Q14966 1978 aaKnown RBP14.58□□□□□ -0.08
CLIP3-205ENST00000592017 MYH10P35580 1976 aa14.57□□□□□ -0.08
CLIP3-205ENST00000592017 CCDC163A0A0D9SF12 145 aa14.57□□□□□ -0.08
CLIP3-205ENST00000592017 SLC12A8A0AV02 714 aa14.57□□□□□ -0.08
CLIP3-205ENST00000592017 SMTNL1A8MU46 457 aa14.57□□□□□ -0.08
CLIP3-205ENST00000592017 GABBR2O75899 941 aa14.57□□□□□ -0.08
CLIP3-205ENST00000592017 ADH1CP00326 375 aa14.57□□□□□ -0.08
CLIP3-205ENST00000592017 ADH5P11766 374 aa14.57□□□□□ -0.08
CLIP3-205ENST00000592017 SEC13P55735 322 aa14.57□□□□□ -0.08
CLIP3-205ENST00000592017 POLR2FP61218 127 aaKnown RBP14.57□□□□□ -0.08
CLIP3-205ENST00000592017 UBXN1Q04323 297 aa14.57□□□□□ -0.08
CLIP3-205ENST00000592017 DMC1Q14565 340 aa14.57□□□□□ -0.08
CLIP3-205ENST00000592017 SYCP1Q15431 976 aa14.57□□□□□ -0.08
CLIP3-205ENST00000592017 C2orf27AQ580R0 203 aa14.57□□□□□ -0.08
CLIP3-205ENST00000592017 BSPRYQ5W0U4 402 aa14.57□□□□□ -0.08
CLIP3-205ENST00000592017 TMEM25Q86YD3 366 aa14.57□□□□□ -0.08
CLIP3-205ENST00000592017 DHX40Q8IX18 779 aaKnown RBP14.57□□□□□ -0.08
CLIP3-205ENST00000592017 CAMKK1Q8N5S9 505 aa14.57□□□□□ -0.08
CLIP3-205ENST00000592017 FAM149B1Q96BN6 582 aa14.57□□□□□ -0.08
CLIP3-205ENST00000592017 BPIFA3Q9BQP9 254 aa14.57□□□□□ -0.08
CLIP3-205ENST00000592017 FUCA2Q9BTY2 467 aa14.57□□□□□ -0.08
CLIP3-205ENST00000592017 GANQ9H2C0 597 aa14.57□□□□□ -0.08
CLIP3-205ENST00000592017 HSD3B7Q9H2F3 369 aa14.57□□□□□ -0.08
CLIP3-205ENST00000592017 PDCL3Q9H2J4 239 aa14.57□□□□□ -0.08
CLIP3-205ENST00000592017 PLCB1Q9NQ66 1216 aa14.57□□□□□ -0.08
CLIP3-205ENST00000592017 CYTH4Q9UIA0 394 aa14.57□□□□□ -0.08
CLIP3-205ENST00000592017 GMEB2Q9UKD1 530 aa14.57□□□□□ -0.08
CLIP3-205ENST00000592017 CACNA1AO00555 2505 aa14.56□□□□□ -0.08
CLIP3-205ENST00000592017 A0A0A0MRY4 1105 aa14.56□□□□□ -0.08
CLIP3-205ENST00000592017 FAM170AA1A519 330 aa14.56□□□□□ -0.08
CLIP3-205ENST00000592017 E5RJQ4 531 aa14.56□□□□□ -0.08
CLIP3-205ENST00000592017 F8VZ95 297 aa14.56□□□□□ -0.08
CLIP3-205ENST00000592017 HOXC11O43248 304 aaPredicted RBP14.56□□□□□ -0.08
CLIP3-205ENST00000592017 STC2O76061 302 aa14.56□□□□□ -0.08
CLIP3-205ENST00000592017 FBXO21O94952 628 aa14.56□□□□□ -0.08
CLIP3-205ENST00000592017 KAT7O95251 611 aa14.56□□□□□ -0.08
CLIP3-205ENST00000592017 RETP07949 1114 aa14.56□□□□□ -0.08
CLIP3-205ENST00000592017 CORO1AP31146 461 aaKnown RBP14.56□□□□□ -0.08
CLIP3-205ENST00000592017 CLCN1P35523 988 aa14.56□□□□□ -0.08
CLIP3-205ENST00000592017 KRT9P35527 623 aa14.56□□□□□ -0.08
CLIP3-205ENST00000592017 ACADSBP45954 432 aa14.56□□□□□ -0.08
CLIP3-205ENST00000592017 PDCLQ13371 301 aa14.56□□□□□ -0.08
CLIP3-205ENST00000592017 MEA1Q16626 185 aa14.56□□□□□ -0.08
CLIP3-205ENST00000592017 ANO4Q32M45 955 aa14.56□□□□□ -0.08
CLIP3-205ENST00000592017 EMC10Q5UCC4 262 aa14.56□□□□□ -0.08
CLIP3-205ENST00000592017 TAF3Q5VWG9 929 aa14.56□□□□□ -0.08
CLIP3-205ENST00000592017 HTR3DQ70Z44 454 aa14.56□□□□□ -0.08
CLIP3-205ENST00000592017 CEP68Q76N32 757 aa14.56□□□□□ -0.08
CLIP3-205ENST00000592017 FMNL3Q8IVF7 1028 aa14.56□□□□□ -0.08
CLIP3-205ENST00000592017 ETFBKMTQ8IXQ9 262 aa14.56□□□□□ -0.08
CLIP3-205ENST00000592017 FAM71AQ8IYT1 594 aa14.56□□□□□ -0.08
CLIP3-205ENST00000592017 SCML4Q8N228 414 aa14.56□□□□□ -0.08
CLIP3-205ENST00000592017 PHTF2Q8N3S3 785 aa14.56□□□□□ -0.08
CLIP3-205ENST00000592017 CCDC33Q8N5R6 958 aa14.56□□□□□ -0.08
CLIP3-205ENST00000592017 FAM160A2Q8N612 972 aaPredicted RBP14.56□□□□□ -0.08
CLIP3-205ENST00000592017 NAT16Q8N8M0 369 aa14.56□□□□□ -0.08
CLIP3-205ENST00000592017 C1orf131Q8NDD1 294 aaKnown RBP14.56□□□□□ -0.08
CLIP3-205ENST00000592017 GAB3Q8WWW8 586 aa14.56□□□□□ -0.08
CLIP3-205ENST00000592017 IRGQQ8WZA9 623 aa14.56□□□□□ -0.08
CLIP3-205ENST00000592017 OTUB2Q96DC9 234 aa14.56□□□□□ -0.08
CLIP3-205ENST00000592017 PNKPQ96T60 521 aa14.56□□□□□ -0.08
CLIP3-205ENST00000592017 NAA15Q9BXJ9 866 aaKnown RBP14.56□□□□□ -0.08
CLIP3-205ENST00000592017 NLRC4Q9NPP4 1024 aa14.56□□□□□ -0.08
CLIP3-205ENST00000592017 ABCC13Q9NSE7 274 aa14.56□□□□□ -0.08
CLIP3-205ENST00000592017 OLA1Q9NTK5 396 aaKnown RBP14.56□□□□□ -0.08
CLIP3-205ENST00000592017 SFMBT1Q9UHJ3 866 aa14.56□□□□□ -0.08
CLIP3-205ENST00000592017 DNAH14Q0VDD8 3507 aa14.56□□□□□ -0.08
CLIP3-205ENST00000592017 AXIN1O15169 862 aa14.55□□□□□ -0.08
CLIP3-205ENST00000592017 EPHB6O15197 1021 aa14.55□□□□□ -0.08
CLIP3-205ENST00000592017 MSI1O43347 362 aaKnown RBP14.55□□□□□ -0.08
CLIP3-205ENST00000592017 RPP40O75818 363 aaKnown RBP14.55□□□□□ -0.08
CLIP3-205ENST00000592017 APBB3O95704 486 aa14.55□□□□□ -0.08
CLIP3-205ENST00000592017 LTFP02788 710 aa14.55□□□□□ -0.08
CLIP3-205ENST00000592017 HNRNPLP14866 589 aaKnown RBP eCLIP14.55□□□□□ -0.08
CLIP3-205ENST00000592017 EIF2DP41214 584 aaKnown RBP14.55□□□□□ -0.08
CLIP3-205ENST00000592017 BPIFB4P59827 614 aa14.55□□□□□ -0.08
CLIP3-205ENST00000592017 COG7P83436 770 aa14.55□□□□□ -0.08
CLIP3-205ENST00000592017 GAD2Q05329 585 aa14.55□□□□□ -0.08
CLIP3-205ENST00000592017 KDSRQ06136 332 aa14.55□□□□□ -0.08
CLIP3-205ENST00000592017 SPEM2Q0P670 501 aa14.55□□□□□ -0.08
CLIP3-205ENST00000592017 TPGS1Q6ZTW0 290 aa14.55□□□□□ -0.08
CLIP3-205ENST00000592017 SCUBE3Q8IX30 993 aa14.55□□□□□ -0.08
CLIP3-205ENST00000592017 ZNF276Q8N554 614 aa14.55□□□□□ -0.08
CLIP3-205ENST00000592017 GPR161Q8N6U8 529 aaKnown RBP14.55□□□□□ -0.08
CLIP3-205ENST00000592017 NEK11Q8NG66 645 aa14.55□□□□□ -0.08
CLIP3-205ENST00000592017 BHMTQ93088 406 aa14.55□□□□□ -0.08
CLIP3-205ENST00000592017 ACDQ96AP0 544 aa14.55□□□□□ -0.08
CLIP3-205ENST00000592017 SPAG5Q96R06 1193 aa14.55□□□□□ -0.08
CLIP3-205ENST00000592017 STK33Q9BYT3 514 aa14.55□□□□□ -0.08
CLIP3-205ENST00000592017 ARHGEF4Q9NR80 690 aa14.55□□□□□ -0.08
CLIP3-205ENST00000592017 SPHK2Q9NRA0 654 aa14.55□□□□□ -0.08
CLIP3-205ENST00000592017 TJP2Q9UDY2 1190 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms