RNA–Protein interactions for RNA: ENST00000591622.1

CIRBP-233, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-233ENST00000591622 NEDD8-MDP1E9PL57 170 aa17.14■□□□□ 0.33
CIRBP-233ENST00000591622 GFRA3O60609 400 aa17.14■□□□□ 0.33
CIRBP-233ENST00000591622 LILRB5O75023 590 aa17.14■□□□□ 0.33
CIRBP-233ENST00000591622 TULP3O75386 442 aa17.14■□□□□ 0.33
CIRBP-233ENST00000591622 APODP05090 189 aa17.14■□□□□ 0.33
CIRBP-233ENST00000591622 CDK11BP21127 795 aaKnown RBP17.14■□□□□ 0.33
CIRBP-233ENST00000591622 HOXA6P31267 233 aa17.14■□□□□ 0.33
CIRBP-233ENST00000591622 KRT9P35527 623 aa17.14■□□□□ 0.33
CIRBP-233ENST00000591622 CHKAP35790 457 aa17.14■□□□□ 0.33
CIRBP-233ENST00000591622 GRIA2P42262 883 aa17.14■□□□□ 0.33
CIRBP-233ENST00000591622 PDCLQ13371 301 aa17.14■□□□□ 0.33
CIRBP-233ENST00000591622 TRIP4Q15650 581 aaPredicted RBP17.14■□□□□ 0.33
CIRBP-233ENST00000591622 KLHL40Q2TBA0 621 aa17.14■□□□□ 0.33
CIRBP-233ENST00000591622 TPGS1Q6ZTW0 290 aa17.14■□□□□ 0.33
CIRBP-233ENST00000591622 ASCL5Q7RTU5 278 aa17.14■□□□□ 0.33
CIRBP-233ENST00000591622 DENND1CQ8IV53 801 aa17.14■□□□□ 0.33
CIRBP-233ENST00000591622 PHTF2Q8N3S3 785 aa17.14■□□□□ 0.33
CIRBP-233ENST00000591622 AOPEPQ8N6M6 819 aa17.14■□□□□ 0.33
CIRBP-233ENST00000591622 BPIFA3Q9BQP9 254 aa17.14■□□□□ 0.33
CIRBP-233ENST00000591622 BBS2Q9BXC9 721 aa17.14■□□□□ 0.33
CIRBP-233ENST00000591622 STK33Q9BYT3 514 aa17.14■□□□□ 0.33
CIRBP-233ENST00000591622 HSD3B7Q9H2F3 369 aa17.14■□□□□ 0.33
CIRBP-233ENST00000591622 VPS13AQ96RL7 3174 aa17.14■□□□□ 0.33
CIRBP-233ENST00000591622 USP34Q70CQ2 3546 aa17.13■□□□□ 0.33
CIRBP-233ENST00000591622 PAPSS1O43252 624 aaPredicted RBP17.13■□□□□ 0.33
CIRBP-233ENST00000591622 CACNG3O60359 315 aa17.13■□□□□ 0.33
CIRBP-233ENST00000591622 FYNP06241 537 aa17.13■□□□□ 0.33
CIRBP-233ENST00000591622 TYRP14679 529 aa17.13■□□□□ 0.33
CIRBP-233ENST00000591622 HARS2P49590 506 aaKnown RBP17.13■□□□□ 0.33
CIRBP-233ENST00000591622 KDSRQ06136 332 aa17.13■□□□□ 0.33
CIRBP-233ENST00000591622 PREPLQ4J6C6 727 aaPredicted RBP17.13■□□□□ 0.33
CIRBP-233ENST00000591622 SYT13Q7L8C5 426 aa17.13■□□□□ 0.33
CIRBP-233ENST00000591622 PASD1Q8IV76 773 aa17.13■□□□□ 0.33
CIRBP-233ENST00000591622 SFTPA1Q8IWL2 248 aa17.13■□□□□ 0.33
CIRBP-233ENST00000591622 USP33Q8TEY7 942 aa17.13■□□□□ 0.33
CIRBP-233ENST00000591622 ACDQ96AP0 544 aa17.13■□□□□ 0.33
CIRBP-233ENST00000591622 XPO6Q96QU8 1125 aaKnown RBP17.13■□□□□ 0.33
CIRBP-233ENST00000591622 GANQ9H2C0 597 aa17.13■□□□□ 0.33
CIRBP-233ENST00000591622 SLC8A2Q9UPR5 921 aa17.13■□□□□ 0.33
CIRBP-233ENST00000591622 DMDP11532 3685 aa17.12■□□□□ 0.33
CIRBP-233ENST00000591622 LGALS16A8MUM7 142 aa17.12■□□□□ 0.33
CIRBP-233ENST00000591622 F8VZ95 297 aa17.12■□□□□ 0.33
CIRBP-233ENST00000591622 MSI1O43347 362 aaKnown RBP17.12■□□□□ 0.33
CIRBP-233ENST00000591622 LMNAP02545 664 aaKnown RBP17.12■□□□□ 0.33
CIRBP-233ENST00000591622 NCAM1P13591 858 aa17.12■□□□□ 0.33
CIRBP-233ENST00000591622 CYP11B1P15538 503 aa17.12■□□□□ 0.33
CIRBP-233ENST00000591622 HOXC13P31276 330 aa17.12■□□□□ 0.33
CIRBP-233ENST00000591622 TNFRSF4P43489 277 aa17.12■□□□□ 0.33
CIRBP-233ENST00000591622 KLK7P49862 253 aa17.12■□□□□ 0.33
CIRBP-233ENST00000591622 SEC13P55735 322 aa17.12■□□□□ 0.33
CIRBP-233ENST00000591622 MRPS21P82921 87 aaKnown RBP17.12■□□□□ 0.33
CIRBP-233ENST00000591622 DMWDQ09019 674 aa17.12■□□□□ 0.33
CIRBP-233ENST00000591622 C2orf27AQ580R0 203 aa17.12■□□□□ 0.33
CIRBP-233ENST00000591622 BEND5Q7L4P6 421 aa17.12■□□□□ 0.33
CIRBP-233ENST00000591622 APTXQ7Z2E3 356 aaKnown RBP17.12■□□□□ 0.33
CIRBP-233ENST00000591622 CPXM2Q8N436 756 aa17.12■□□□□ 0.33
CIRBP-233ENST00000591622 FAM149B1Q96BN6 582 aa17.12■□□□□ 0.33
CIRBP-233ENST00000591622 PPP1R13BQ96KQ4 1090 aa17.12■□□□□ 0.33
CIRBP-233ENST00000591622 NOX5Q96PH1 765 aa17.12■□□□□ 0.33
CIRBP-233ENST00000591622 CPXM1Q96SM3 734 aa17.12■□□□□ 0.33
CIRBP-233ENST00000591622 TRIM62Q9BVG3 475 aa17.12■□□□□ 0.33
CIRBP-233ENST00000591622 FAM207AQ9NSI2 230 aaPredicted RBP17.12■□□□□ 0.33
CIRBP-233ENST00000591622 DNAJC17Q9NVM6 304 aaKnown RBP17.12■□□□□ 0.33
CIRBP-233ENST00000591622 SIK3Q9Y2K2 1263 aa17.12■□□□□ 0.33
CIRBP-233ENST00000591622 CACNA1IQ9P0X4 2223 aa17.11■□□□□ 0.33
CIRBP-233ENST00000591622 TBC1D3BA6NDS4 549 aa17.11■□□□□ 0.33
CIRBP-233ENST00000591622 ANTXRLA6NF34 631 aa17.11■□□□□ 0.33
CIRBP-233ENST00000591622 TRIM24O15164 1050 aa17.11■□□□□ 0.33
CIRBP-233ENST00000591622 PENKP01210 267 aaPredicted RBP17.11■□□□□ 0.33
CIRBP-233ENST00000591622 ATP1A3P13637 1013 aa17.11■□□□□ 0.33
CIRBP-233ENST00000591622 PTMSP20962 102 aa17.11■□□□□ 0.33
CIRBP-233ENST00000591622 FNTBP49356 437 aa17.11■□□□□ 0.33
CIRBP-233ENST00000591622 POLR2FP61218 127 aaKnown RBP17.11■□□□□ 0.33
CIRBP-233ENST00000591622 YWHAZP63104 245 aaKnown RBP17.11■□□□□ 0.33
CIRBP-233ENST00000591622 UBXN1Q04323 297 aa17.11■□□□□ 0.33
CIRBP-233ENST00000591622 SYCP1Q15431 976 aa17.11■□□□□ 0.33
CIRBP-233ENST00000591622 FYB2Q5VWT5 728 aa17.11■□□□□ 0.33
CIRBP-233ENST00000591622 HEATR6Q6AI08 1181 aaKnown RBP17.11■□□□□ 0.33
CIRBP-233ENST00000591622 GRAMD4Q6IC98 578 aa17.11■□□□□ 0.33
CIRBP-233ENST00000591622 NUDT18Q6ZVK8 323 aa17.11■□□□□ 0.33
CIRBP-233ENST00000591622 LONP2Q86WA8 852 aa17.11■□□□□ 0.33
CIRBP-233ENST00000591622 FAM217AQ8IXS0 508 aa17.11■□□□□ 0.33
CIRBP-233ENST00000591622 CAMKK1Q8N5S9 505 aa17.11■□□□□ 0.33
CIRBP-233ENST00000591622 TERB1Q8NA31 727 aa17.11■□□□□ 0.33
CIRBP-233ENST00000591622 C1orf131Q8NDD1 294 aaKnown RBP17.11■□□□□ 0.33
CIRBP-233ENST00000591622 DQX1Q8TE96 717 aaKnown RBP17.11■□□□□ 0.33
CIRBP-233ENST00000591622 BHMTQ93088 406 aa17.11■□□□□ 0.33
CIRBP-233ENST00000591622 P2RY11Q96G91 374 aa17.11■□□□□ 0.33
CIRBP-233ENST00000591622 POLR3BQ9NW08 1133 aaPredicted RBP17.11■□□□□ 0.33
CIRBP-233ENST00000591622 PLK2Q9NYY3 685 aa17.11■□□□□ 0.33
CIRBP-233ENST00000591622 TJP2Q9UDY2 1190 aa17.11■□□□□ 0.33
CIRBP-233ENST00000591622 NAALADL1Q9UQQ1 740 aa17.11■□□□□ 0.33
CIRBP-233ENST00000591622 DAAM1Q9Y4D1 1078 aa17.11■□□□□ 0.33
CIRBP-233ENST00000591622 CEP83Q9Y592 693 aa17.11■□□□□ 0.33
CIRBP-233ENST00000591622 ZFHX2Q9C0A1 2572 aaPredicted RBP17.1■□□□□ 0.33
CIRBP-233ENST00000591622 SMTNL1A8MU46 457 aa17.1■□□□□ 0.33
CIRBP-233ENST00000591622 CAPN9O14815 690 aa17.1■□□□□ 0.33
CIRBP-233ENST00000591622 EPHB6O15197 1021 aa17.1■□□□□ 0.33
CIRBP-233ENST00000591622 LATS1O95835 1130 aa17.1■□□□□ 0.33
CIRBP-233ENST00000591622 IGLV3-27P01718 113 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms