RNA–Protein interactions for RNA: ENST00000590171.1

CIRBP-226, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-226ENST00000590171 TOGARAM2Q6ZUX3 1019 aa21.55■■□□□ 1.04
CIRBP-226ENST00000590171 MDGA1Q8NFP4 955 aa21.55■■□□□ 1.04
CIRBP-226ENST00000590171 DCLK3Q9C098 648 aa21.55■■□□□ 1.04
CIRBP-226ENST00000590171 PLK2Q9NYY3 685 aa21.55■■□□□ 1.04
CIRBP-226ENST00000590171 DCLK1O15075 740 aa21.54■■□□□ 1.04
CIRBP-226ENST00000590171 LRP3O75074 770 aa21.54■■□□□ 1.04
CIRBP-226ENST00000590171 KRT5P13647 590 aa21.54■■□□□ 1.04
CIRBP-226ENST00000590171 SLC9A1P19634 815 aa21.54■■□□□ 1.04
CIRBP-226ENST00000590171 EOGTQ5NDL2 527 aa21.54■■□□□ 1.04
CIRBP-226ENST00000590171 DENND1CQ8IV53 801 aa21.54■■□□□ 1.04
CIRBP-226ENST00000590171 FMNL3Q8IVF7 1028 aa21.54■■□□□ 1.04
CIRBP-226ENST00000590171 ZNF513Q8N8E2 541 aaPredicted RBP21.54■■□□□ 1.04
CIRBP-226ENST00000590171 RNF139Q8WU17 664 aa21.54■■□□□ 1.04
CIRBP-226ENST00000590171 PLD4Q96BZ4 506 aa21.54■■□□□ 1.04
CIRBP-226ENST00000590171 ABCC13Q9NSE7 274 aa21.54■■□□□ 1.04
CIRBP-226ENST00000590171 SEMA4GQ9NTN9 838 aa21.54■■□□□ 1.04
CIRBP-226ENST00000590171 LMBRD1Q9NUN5 540 aa21.54■■□□□ 1.04
CIRBP-226ENST00000590171 SFMBT1Q9UHJ3 866 aa21.54■■□□□ 1.04
CIRBP-226ENST00000590171 WDR87Q6ZQQ6 2873 aa21.54■■□□□ 1.04
CIRBP-226ENST00000590171 PENKP01210 267 aaPredicted RBP21.53■■□□□ 1.04
CIRBP-226ENST00000590171 CISD3P0C7P0 127 aa21.53■■□□□ 1.04
CIRBP-226ENST00000590171 CHKAP35790 457 aa21.53■■□□□ 1.04
CIRBP-226ENST00000590171 DGKGP49619 791 aa21.53■■□□□ 1.04
CIRBP-226ENST00000590171 APBA1Q02410 837 aa21.53■■□□□ 1.04
CIRBP-226ENST00000590171 LMNB2Q03252 620 aa21.53■■□□□ 1.04
CIRBP-226ENST00000590171 TRIP4Q15650 581 aaPredicted RBP21.53■■□□□ 1.04
CIRBP-226ENST00000590171 TPD52L1Q16890 204 aaPredicted RBP21.53■■□□□ 1.04
CIRBP-226ENST00000590171 PLK5Q496M5 336 aa21.53■■□□□ 1.04
CIRBP-226ENST00000590171 FYB2Q5VWT5 728 aa21.53■■□□□ 1.04
CIRBP-226ENST00000590171 GBP6Q6ZN66 633 aa21.53■■□□□ 1.04
CIRBP-226ENST00000590171 NUDT18Q6ZVK8 323 aa21.53■■□□□ 1.04
CIRBP-226ENST00000590171 KCNV2Q8TDN2 545 aa21.53■■□□□ 1.04
CIRBP-226ENST00000590171 CLEC4CQ8WTT0 213 aa21.53■■□□□ 1.04
CIRBP-226ENST00000590171 IRGQQ8WZA9 623 aa21.53■■□□□ 1.04
CIRBP-226ENST00000590171 ZC3H10Q96K80 434 aaKnown RBP21.53■■□□□ 1.04
CIRBP-226ENST00000590171 HSFY1Q96LI6 401 aa21.53■■□□□ 1.04
CIRBP-226ENST00000590171 DUSP15Q9H1R2 295 aaPredicted RBP21.53■■□□□ 1.04
CIRBP-226ENST00000590171 STARD13Q9Y3M8 1113 aa21.53■■□□□ 1.04
CIRBP-226ENST00000590171 EML5Q05BV3 1969 aa21.52■■□□□ 1.04
CIRBP-226ENST00000590171 PRRT4C9JH25 899 aa21.52■■□□□ 1.04
CIRBP-226ENST00000590171 EPN2O95208 641 aa21.52■■□□□ 1.04
CIRBP-226ENST00000590171 GPD2P43304 727 aa21.52■■□□□ 1.04
CIRBP-226ENST00000590171 MTIF2P46199 727 aaKnown RBP21.52■■□□□ 1.04
CIRBP-226ENST00000590171 MFAP3P55082 362 aa21.52■■□□□ 1.04
CIRBP-226ENST00000590171 RSPO4Q2I0M5 234 aaPredicted RBP21.52■■□□□ 1.04
CIRBP-226ENST00000590171 EGFLAMQ63HQ2 1017 aa21.52■■□□□ 1.04
CIRBP-226ENST00000590171 ENOSF1Q7L5Y1 443 aa21.52■■□□□ 1.04
CIRBP-226ENST00000590171 FAM217AQ8IXS0 508 aa21.52■■□□□ 1.04
CIRBP-226ENST00000590171 LOXL4Q96JB6 756 aa21.52■■□□□ 1.04
CIRBP-226ENST00000590171 THAP9Q9H5L6 903 aa21.52■■□□□ 1.04
CIRBP-226ENST00000590171 POLMQ9NP87 494 aaPredicted RBP21.52■■□□□ 1.04
CIRBP-226ENST00000590171 ACP6Q9NPH0 428 aa21.52■■□□□ 1.04
CIRBP-226ENST00000590171 DLL3Q9NYJ7 618 aa21.52■■□□□ 1.04
CIRBP-226ENST00000590171 FBXO10Q9UK96 956 aa21.52■■□□□ 1.04
CIRBP-226ENST00000590171 INVSQ9Y283 1065 aa21.52■■□□□ 1.04
CIRBP-226ENST00000590171 HBS1LQ9Y450 684 aaKnown RBP21.52■■□□□ 1.04
CIRBP-226ENST00000590171 DYNC1LI1Q9Y6G9 523 aaKnown RBP21.52■■□□□ 1.04
CIRBP-226ENST00000590171 BECN2A8MW95 431 aa21.51■■□□□ 1.03
CIRBP-226ENST00000590171 MSI1O43347 362 aaKnown RBP21.51■■□□□ 1.03
CIRBP-226ENST00000590171 ALDH1A2O94788 518 aa21.51■■□□□ 1.03
CIRBP-226ENST00000590171 LETM1O95202 739 aaPredicted RBP21.51■■□□□ 1.03
CIRBP-226ENST00000590171 CSRP2Q16527 193 aa21.51■■□□□ 1.03
CIRBP-226ENST00000590171 EXOC3L4Q17RC7 722 aa21.51■■□□□ 1.03
CIRBP-226ENST00000590171 MSANTD2Q6P1R3 559 aa21.51■■□□□ 1.03
CIRBP-226ENST00000590171 DENND1BQ6P3S1 775 aa21.51■■□□□ 1.03
CIRBP-226ENST00000590171 TRMT11Q7Z4G4 463 aaKnown RBP21.51■■□□□ 1.03
CIRBP-226ENST00000590171 CPXM2Q8N436 756 aa21.51■■□□□ 1.03
CIRBP-226ENST00000590171 ACOX2Q99424 681 aa21.51■■□□□ 1.03
CIRBP-226ENST00000590171 MIS12Q9H081 205 aa21.51■■□□□ 1.03
CIRBP-226ENST00000590171 ARRDC1-AS1Q9H2J1 176 aa21.51■■□□□ 1.03
CIRBP-226ENST00000590171 APEX2Q9UBZ4 518 aa21.51■■□□□ 1.03
CIRBP-226ENST00000590171 TCRBV21S2A2A0A5A6 115 aa21.5■■□□□ 1.03
CIRBP-226ENST00000590171 GTPBP10A4D1E9 387 aaKnown RBP21.5■■□□□ 1.03
CIRBP-226ENST00000590171 PRR5-ARHGAP8B1AHC4 643 aa21.5■■□□□ 1.03
CIRBP-226ENST00000590171 LTFP02788 710 aa21.5■■□□□ 1.03
CIRBP-226ENST00000590171 PON1P27169 355 aa21.5■■□□□ 1.03
CIRBP-226ENST00000590171 ERCC5P28715 1186 aaPredicted RBP21.5■■□□□ 1.03
CIRBP-226ENST00000590171 GNA15P30679 374 aa21.5■■□□□ 1.03
CIRBP-226ENST00000590171 WASP42768 502 aa21.5■■□□□ 1.03
CIRBP-226ENST00000590171 RPL34P49207 117 aaKnown RBP21.5■■□□□ 1.03
CIRBP-226ENST00000590171 ARHGAP8P85298 464 aa21.5■■□□□ 1.03
CIRBP-226ENST00000590171 MAN2A1Q16706 1144 aa21.5■■□□□ 1.03
CIRBP-226ENST00000590171 ARHGAP44Q17R89 818 aa21.5■■□□□ 1.03
CIRBP-226ENST00000590171 USP39Q53GS9 565 aaKnown RBP21.5■■□□□ 1.03
CIRBP-226ENST00000590171 PRR23CQ6ZRP0 262 aa21.5■■□□□ 1.03
CIRBP-226ENST00000590171 OLIG1Q8TAK6 271 aa21.5■■□□□ 1.03
CIRBP-226ENST00000590171 FAM81BQ96LP2 452 aa21.5■■□□□ 1.03
CIRBP-226ENST00000590171 DACH1Q9UI36 760 aa21.5■■□□□ 1.03
CIRBP-226ENST00000590171 SPTBN4Q9H254 2564 aa21.5■■□□□ 1.03
CIRBP-226ENST00000590171 DMXL1Q9Y485 3027 aa21.5■■□□□ 1.03
CIRBP-226ENST00000590171 DCHS1Q96JQ0 3298 aa21.49■■□□□ 1.03
CIRBP-226ENST00000590171 THAP12O43422 761 aa21.49■■□□□ 1.03
CIRBP-226ENST00000590171 FBXO21O94952 628 aa21.49■■□□□ 1.03
CIRBP-226ENST00000590171 HOXB2P14652 356 aa21.49■■□□□ 1.03
CIRBP-226ENST00000590171 NTSR1P30989 418 aa21.49■■□□□ 1.03
CIRBP-226ENST00000590171 GBP1P32455 592 aa21.49■■□□□ 1.03
CIRBP-226ENST00000590171 HARS2P49590 506 aaKnown RBP21.49■■□□□ 1.03
CIRBP-226ENST00000590171 PUM1Q14671 1186 aaKnown RBP eCLIP21.49■■□□□ 1.03
CIRBP-226ENST00000590171 ELF2Q15723 593 aa21.49■■□□□ 1.03
CIRBP-226ENST00000590171 CCDC6Q16204 474 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms