RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 TARSP26639 723 aaKnown RBP10.89□□□□□ -0.67
SDF2-208ENST00000589788 SOX9P48436 509 aa10.89□□□□□ -0.67
SDF2-208ENST00000589788 TKTL1P51854 596 aa10.89□□□□□ -0.67
SDF2-208ENST00000589788 AMPD2Q01433 879 aa10.89□□□□□ -0.67
SDF2-208ENST00000589788 MYL5Q02045 173 aa10.89□□□□□ -0.67
SDF2-208ENST00000589788 GOLGA8FQ08AF8 430 aa10.89□□□□□ -0.67
SDF2-208ENST00000589788 GOLGA8DPQ0D2H9 430 aa10.89□□□□□ -0.67
SDF2-208ENST00000589788 CNGA2Q16280 664 aa10.89□□□□□ -0.67
SDF2-208ENST00000589788 MIIPQ5JXC2 388 aa10.89□□□□□ -0.67
SDF2-208ENST00000589788 C10orf120Q5SQS8 335 aa10.89□□□□□ -0.67
SDF2-208ENST00000589788 GJB7Q6PEY0 223 aa10.89□□□□□ -0.67
SDF2-208ENST00000589788 Q6ZVU0 165 aa10.89□□□□□ -0.67
SDF2-208ENST00000589788 CCDC186Q7Z3E2 898 aa10.89□□□□□ -0.67
SDF2-208ENST00000589788 SIX6OS1Q8N1H7 587 aa10.89□□□□□ -0.67
SDF2-208ENST00000589788 ARHGAP18Q8N392 663 aa10.89□□□□□ -0.67
SDF2-208ENST00000589788 RIN3Q8TB24 985 aa10.89□□□□□ -0.67
SDF2-208ENST00000589788 BPIFA3Q9BQP9 254 aa10.89□□□□□ -0.67
SDF2-208ENST00000589788 IRF2BPLQ9H1B7 796 aa10.89□□□□□ -0.67
SDF2-208ENST00000589788 TSPAN10Q9H1Z9 355 aaPredicted RBP10.89□□□□□ -0.67
SDF2-208ENST00000589788 ZFAND3Q9H8U3 227 aa10.89□□□□□ -0.67
SDF2-208ENST00000589788 FANCLQ9NW38 375 aa10.89□□□□□ -0.67
SDF2-208ENST00000589788 TAB2Q9NYJ8 693 aa10.89□□□□□ -0.67
SDF2-208ENST00000589788 CFAP97Q9P2B7 532 aa10.89□□□□□ -0.67
SDF2-208ENST00000589788 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.89□□□□□ -0.67
SDF2-208ENST00000589788 CNTN6Q9UQ52 1028 aa10.89□□□□□ -0.67
SDF2-208ENST00000589788 SH3BP1Q9Y3L3 701 aa10.89□□□□□ -0.67
SDF2-208ENST00000589788 WNT6Q9Y6F9 365 aa10.89□□□□□ -0.67
SDF2-208ENST00000589788 SOWAHDA6NJG2 315 aa10.88□□□□□ -0.67
SDF2-208ENST00000589788 TULP2O00295 520 aa10.88□□□□□ -0.67
SDF2-208ENST00000589788 NFATC1O95644 943 aa10.88□□□□□ -0.67
SDF2-208ENST00000589788 ZBED1O96006 694 aa10.88□□□□□ -0.67
SDF2-208ENST00000589788 CALCAP01258 141 aa10.88□□□□□ -0.67
SDF2-208ENST00000589788 RARGP13631 454 aa10.88□□□□□ -0.67
SDF2-208ENST00000589788 CDK11BP21127 795 aaKnown RBP10.88□□□□□ -0.67
SDF2-208ENST00000589788 ATP5C1P36542 298 aaKnown RBP10.88□□□□□ -0.67
SDF2-208ENST00000589788 MAGEA9P43362 315 aa10.88□□□□□ -0.67
SDF2-208ENST00000589788 PLA2G4AP47712 749 aa10.88□□□□□ -0.67
SDF2-208ENST00000589788 PGFP49763 221 aa10.88□□□□□ -0.67
SDF2-208ENST00000589788 ZNF132P52740 706 aa10.88□□□□□ -0.67
SDF2-208ENST00000589788 APBA1Q02410 837 aa10.88□□□□□ -0.67
SDF2-208ENST00000589788 ADIGQ0VDE8 80 aa10.88□□□□□ -0.67
SDF2-208ENST00000589788 RAB41Q5JT25 222 aa10.88□□□□□ -0.67
SDF2-208ENST00000589788 FKBP15Q5T1M5 1219 aa10.88□□□□□ -0.67
SDF2-208ENST00000589788 CDKAL1Q5VV42 579 aa10.88□□□□□ -0.67
SDF2-208ENST00000589788 RSRC2Q7L4I2 434 aaKnown RBP10.88□□□□□ -0.67
SDF2-208ENST00000589788 GAS2L3Q86XJ1 694 aa10.88□□□□□ -0.67
SDF2-208ENST00000589788 KIAA1958Q8N8K9 716 aa10.88□□□□□ -0.67
SDF2-208ENST00000589788 PRSS33Q8NF86 280 aa10.88□□□□□ -0.67
SDF2-208ENST00000589788 EXOC4Q96A65 974 aa10.88□□□□□ -0.67
SDF2-208ENST00000589788 CDK5RAP1Q96SZ6 601 aaKnown RBP10.88□□□□□ -0.67
SDF2-208ENST00000589788 NMUR1Q9HB89 426 aa10.88□□□□□ -0.67
SDF2-208ENST00000589788 HPS4Q9NQG7 708 aa10.88□□□□□ -0.67
SDF2-208ENST00000589788 TBC1D14Q9P2M4 693 aa10.88□□□□□ -0.67
SDF2-208ENST00000589788 DNMT3LQ9UJW3 386 aa10.88□□□□□ -0.67
SDF2-208ENST00000589788 DNAJC12Q9UKB3 198 aa10.88□□□□□ -0.67
SDF2-208ENST00000589788 USP3Q9Y6I4 520 aa10.88□□□□□ -0.67
SDF2-208ENST00000589788 MUC6Q6W4X9 2439 aa10.88□□□□□ -0.67
SDF2-208ENST00000589788 E2F8A0AVK6 867 aa10.87□□□□□ -0.67
SDF2-208ENST00000589788 SHISA7A6NL88 538 aa10.87□□□□□ -0.67
SDF2-208ENST00000589788 SCAMP3O14828 347 aaKnown RBP10.87□□□□□ -0.67
SDF2-208ENST00000589788 THAP12O43422 761 aa10.87□□□□□ -0.67
SDF2-208ENST00000589788 ZIC2O95409 532 aaPredicted RBP10.87□□□□□ -0.67
SDF2-208ENST00000589788 TBX18O95935 607 aa10.87□□□□□ -0.67
SDF2-208ENST00000589788 IRF1P10914 325 aa10.87□□□□□ -0.67
SDF2-208ENST00000589788 LCP1P13796 627 aa10.87□□□□□ -0.67
SDF2-208ENST00000589788 TIMP2P16035 220 aa10.87□□□□□ -0.67
SDF2-208ENST00000589788 GNA15P30679 374 aa10.87□□□□□ -0.67
SDF2-208ENST00000589788 RPS9P46781 194 aaKnown RBP10.87□□□□□ -0.67
SDF2-208ENST00000589788 RGS7P49802 495 aa10.87□□□□□ -0.67
SDF2-208ENST00000589788 ZNF165P49910 485 aa10.87□□□□□ -0.67
SDF2-208ENST00000589788 YWHAGP61981 247 aaKnown RBP eCLIP10.87□□□□□ -0.67
SDF2-208ENST00000589788 ZXDBP98169 803 aa10.87□□□□□ -0.67
SDF2-208ENST00000589788 LRRC32Q14392 662 aa10.87□□□□□ -0.67
SDF2-208ENST00000589788 PON2Q15165 354 aa10.87□□□□□ -0.67
SDF2-208ENST00000589788 KRT31Q15323 416 aa10.87□□□□□ -0.67
SDF2-208ENST00000589788 PKDCCQ504Y2 493 aa10.87□□□□□ -0.67
SDF2-208ENST00000589788 KLHDC10Q6PID8 442 aa10.87□□□□□ -0.67
SDF2-208ENST00000589788 SCD5Q86SK9 330 aa10.87□□□□□ -0.67
SDF2-208ENST00000589788 AOPEPQ8N6M6 819 aa10.87□□□□□ -0.67
SDF2-208ENST00000589788 KCTD13Q8WZ19 329 aa10.87□□□□□ -0.67
SDF2-208ENST00000589788 SHC3Q92529 594 aa10.87□□□□□ -0.67
SDF2-208ENST00000589788 SECISBP2LQ93073 1101 aaKnown RBP10.87□□□□□ -0.67
SDF2-208ENST00000589788 CLDN23Q96B33 292 aa10.87□□□□□ -0.67
SDF2-208ENST00000589788 FAM122AQ96E09 287 aa10.87□□□□□ -0.67
SDF2-208ENST00000589788 ZSWIM1Q9BR11 485 aa10.87□□□□□ -0.67
SDF2-208ENST00000589788 ULBP1Q9BZM6 244 aa10.87□□□□□ -0.67
SDF2-208ENST00000589788 VPS16Q9H269 839 aa10.87□□□□□ -0.67
SDF2-208ENST00000589788 LINC00597Q9H2U6 94 aa10.87□□□□□ -0.67
SDF2-208ENST00000589788 ECT2Q9H8V3 914 aa10.87□□□□□ -0.67
SDF2-208ENST00000589788 LMAN1LQ9HAT1 526 aa10.87□□□□□ -0.67
SDF2-208ENST00000589788 SIX2Q9NPC8 291 aa10.87□□□□□ -0.67
SDF2-208ENST00000589788 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.87□□□□□ -0.67
SDF2-208ENST00000589788 SPATA6Q9NWH7 488 aaPredicted RBP10.87□□□□□ -0.67
SDF2-208ENST00000589788 OSER1Q9NX31 292 aa10.87□□□□□ -0.67
SDF2-208ENST00000589788 CLIC5Q9NZA1 410 aa10.87□□□□□ -0.67
SDF2-208ENST00000589788 SCHIP1Q9P0W5 487 aaPredicted RBP10.87□□□□□ -0.67
SDF2-208ENST00000589788 DLGAP2Q9P1A6 1054 aa10.87□□□□□ -0.67
SDF2-208ENST00000589788 SEPT3Q9UH03 358 aa10.87□□□□□ -0.67
SDF2-208ENST00000589788 NUDT5Q9UKK9 219 aa10.87□□□□□ -0.67
SDF2-208ENST00000589788 OTOL1A6NHN0 477 aaPredicted RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms